RNA–Protein interactions for RNA: ENST00000323578.12

CHID1-201, Transcript of chitinase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHID1, Length 3,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-201ENST00000323578 IFT140Q96RY7 1462 aa21.42■■□□□ 1.02
CHID1-201ENST00000323578 BCORL1Q5H9F3 1711 aa21.39■■□□□ 1.02
CHID1-201ENST00000323578 RALBP1Q15311 655 aa21.38■■□□□ 1.01
CHID1-201ENST00000323578 NLRP13Q86W25 1043 aa21.38■■□□□ 1.01
CHID1-201ENST00000323578 KTN1Q86UP2 1357 aaKnown RBP21.38■■□□□ 1.01
CHID1-201ENST00000323578 IPO9Q96P70 1041 aaKnown RBP21.35■■□□□ 1.01
CHID1-201ENST00000323578 CCDC146Q8IYE0 955 aa21.34■■□□□ 1.01
CHID1-201ENST00000323578 CCDC144AA2RUR9 1427 aa21.34■■□□□ 1.01
CHID1-201ENST00000323578 CRBNQ96SW2 442 aa21.33■■□□□ 1.01
CHID1-201ENST00000323578 PTPRGP23470 1445 aa21.32■■□□□ 1
CHID1-201ENST00000323578 SLC4A3P48751 1232 aa21.32■■□□□ 1
CHID1-201ENST00000323578 C20orf194Q5TEA3 1177 aa21.31■■□□□ 1
CHID1-201ENST00000323578 ADAMTS8Q9UP79 889 aa21.3■■□□□ 1
CHID1-201ENST00000323578 ATP10BO94823 1461 aa21.3■■□□□ 1
CHID1-201ENST00000323578 CHGAP10645 457 aaKnown RBP21.3■■□□□ 1
CHID1-201ENST00000323578 TNNT2P45379 298 aaPredicted RBP21.3■■□□□ 1
CHID1-201ENST00000323578 WDR43Q15061 677 aaKnown RBP eCLIP21.3■■□□□ 1
CHID1-201ENST00000323578 PDE4AP27815 886 aa21.29■■□□□ 1
CHID1-201ENST00000323578 TMF1P82094 1093 aa21.28■■□□□ 1
CHID1-201ENST00000323578 KNSTRNQ9Y448 316 aa21.28■■□□□ 1
CHID1-201ENST00000323578 MAGI1Q96QZ7 1491 aaPredicted RBP21.28■■□□□ 1
CHID1-201ENST00000323578 DISP3Q9P2K9 1392 aa21.27■■□□□ 1
CHID1-201ENST00000323578 RGS3P49796 1198 aa21.27■■□□□ 1
CHID1-201ENST00000323578 NEUROD2Q15784 382 aa21.27■■□□□ 1
CHID1-201ENST00000323578 EIF4G3O43432 1585 aaKnown RBP21.27■■□□□ 1
CHID1-201ENST00000323578 RTN4Q9NQC3 1192 aaKnown RBP21.26■□□□□ 0.99
CHID1-201ENST00000323578 BRD4O60885 1362 aaPredicted RBP21.26■□□□□ 0.99
CHID1-201ENST00000323578 CEP170Q5SW79 1584 aa21.24■□□□□ 0.99
CHID1-201ENST00000323578 ARID4BQ4LE39 1312 aaPredicted RBP21.23■□□□□ 0.99
CHID1-201ENST00000323578 PER1O15534 1290 aaPredicted RBP21.22■□□□□ 0.99
CHID1-201ENST00000323578 AFAP1Q8N556 730 aa21.22■□□□□ 0.99
CHID1-201ENST00000323578 SYNJ2O15056 1496 aa21.22■□□□□ 0.99
CHID1-201ENST00000323578 NEFMP07197 916 aa21.21■□□□□ 0.99
CHID1-201ENST00000323578 MBD5Q9P267 1494 aa21.21■□□□□ 0.99
CHID1-201ENST00000323578 RALGAPBQ86X10 1494 aa21.2■□□□□ 0.98
CHID1-201ENST00000323578 RNF123Q5XPI4 1314 aa21.2■□□□□ 0.98
CHID1-201ENST00000323578 KDM5CP41229 1560 aa21.2■□□□□ 0.98
CHID1-201ENST00000323578 DAXXQ9UER7 740 aaPredicted RBP21.19■□□□□ 0.98
CHID1-201ENST00000323578 TESK2Q96S53 571 aa21.18■□□□□ 0.98
CHID1-201ENST00000323578 PLEKHH2Q8IVE3 1493 aa21.16■□□□□ 0.98
CHID1-201ENST00000323578 TCERG1O14776 1098 aaKnown RBP21.15■□□□□ 0.98
CHID1-201ENST00000323578 LRPPRCP42704 1394 aaKnown RBP21.14■□□□□ 0.98
CHID1-201ENST00000323578 ADGRL2O95490 1459 aa21.13■□□□□ 0.97
CHID1-201ENST00000323578 ARHGAP5Q13017 1502 aa21.13■□□□□ 0.97
CHID1-201ENST00000323578 APAF1O14727 1248 aa21.13■□□□□ 0.97
CHID1-201ENST00000323578 NUTM2DQ5VT03 806 aaPredicted RBP21.13■□□□□ 0.97
CHID1-201ENST00000323578 ITSN2Q9NZM3 1697 aa21.12■□□□□ 0.97
CHID1-201ENST00000323578 CANXP27824 592 aaKnown RBP21.11■□□□□ 0.97
CHID1-201ENST00000323578 UHRF1BP1Q6BDS2 1440 aa21.11■□□□□ 0.97
CHID1-201ENST00000323578 PPP2R1AP30153 589 aa21.11■□□□□ 0.97
CHID1-201ENST00000323578 PRAG1Q86YV5 1406 aa21.11■□□□□ 0.97
CHID1-201ENST00000323578 RRP7AQ9Y3A4 280 aaKnown RBP21.11■□□□□ 0.97
CHID1-201ENST00000323578 PDE3BQ13370 1112 aa21.1■□□□□ 0.97
CHID1-201ENST00000323578 BACH2Q9BYV9 841 aa21.1■□□□□ 0.97
CHID1-201ENST00000323578 KIF3BO15066 747 aa21.1■□□□□ 0.97
CHID1-201ENST00000323578 FAM135AQ9P2D6 1515 aa21.09■□□□□ 0.97
CHID1-201ENST00000323578 ERBINQ96RT1 1412 aa21.09■□□□□ 0.97
CHID1-201ENST00000323578 PARD3Q8TEW0 1356 aa21.08■□□□□ 0.97
CHID1-201ENST00000323578 FRAT1Q92837 279 aaPredicted RBP21.08■□□□□ 0.97
CHID1-201ENST00000323578 ABCC10Q5T3U5 1492 aa21.08■□□□□ 0.97
CHID1-201ENST00000323578 CFAP70Q5T0N1 1121 aa21.08■□□□□ 0.97
CHID1-201ENST00000323578 CCDC141Q6ZP82 1450 aa21.08■□□□□ 0.96
CHID1-201ENST00000323578 EFCAB2Q5VUJ9 269 aa21.07■□□□□ 0.96
CHID1-201ENST00000323578 BCAR3O75815 825 aa21.07■□□□□ 0.96
CHID1-201ENST00000323578 GOLGA2Q08379 1002 aa21.06■□□□□ 0.96
CHID1-201ENST00000323578 RSPH4AQ5TD94 716 aa21.06■□□□□ 0.96
CHID1-201ENST00000323578 SYCP2Q9BX26 1530 aa21.06■□□□□ 0.96
CHID1-201ENST00000323578 ADGBQ8N7X0 1667 aa21.06■□□□□ 0.96
CHID1-201ENST00000323578 SAFB2Q14151 953 aaKnown RBP eCLIP21.05■□□□□ 0.96
CHID1-201ENST00000323578 SPAG9O60271 1321 aaKnown RBP21.05■□□□□ 0.96
CHID1-201ENST00000323578 A2MP01023 1474 aa21.04■□□□□ 0.96
CHID1-201ENST00000323578 CDC42BPAQ5VT25 1732 aa21.04■□□□□ 0.96
CHID1-201ENST00000323578 SPINK5Q9NQ38 1064 aaPredicted RBP21.04■□□□□ 0.96
CHID1-201ENST00000323578 BCL2L13Q9BXK5 485 aa21.04■□□□□ 0.96
CHID1-201ENST00000323578 PLA2R1Q13018 1463 aa21.03■□□□□ 0.96
CHID1-201ENST00000323578 NUP160Q12769 1436 aa21.02■□□□□ 0.96
CHID1-201ENST00000323578 PLEKHH1Q9ULM0 1364 aa21.01■□□□□ 0.95
CHID1-201ENST00000323578 IL27Q8NEV9 243 aa21.01■□□□□ 0.95
CHID1-201ENST00000323578 TRAK1Q9UPV9 953 aa21.01■□□□□ 0.95
CHID1-201ENST00000323578 DUSP27Q5VZP5 1158 aa20.99■□□□□ 0.95
CHID1-201ENST00000323578 DMRT2Q9Y5R5 561 aa20.99■□□□□ 0.95
CHID1-201ENST00000323578 CLUAP1Q96AJ1 413 aa20.98■□□□□ 0.95
CHID1-201ENST00000323578 TMEM132EQ6IEE7 984 aa20.97■□□□□ 0.95
CHID1-201ENST00000323578 GGT6Q6P531 493 aa20.97■□□□□ 0.95
CHID1-201ENST00000323578 ARXQ96QS3 562 aa20.97■□□□□ 0.95
CHID1-201ENST00000323578 ARHGEF12Q9NZN5 1544 aa20.96■□□□□ 0.95
CHID1-201ENST00000323578 COG6Q9Y2V7 657 aa20.96■□□□□ 0.95
CHID1-201ENST00000323578 AMER1Q5JTC6 1135 aaPredicted RBP20.96■□□□□ 0.95
CHID1-201ENST00000323578 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.96■□□□□ 0.95
CHID1-201ENST00000323578 PANK1Q8TE04 598 aa20.96■□□□□ 0.95
CHID1-201ENST00000323578 POLR1AO95602 1720 aaPredicted RBP20.95■□□□□ 0.94
CHID1-201ENST00000323578 SAMD9LQ8IVG5 1584 aa20.95■□□□□ 0.94
CHID1-201ENST00000323578 ABCA8O94911 1581 aa20.94■□□□□ 0.94
CHID1-201ENST00000323578 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.93■□□□□ 0.94
CHID1-201ENST00000323578 CROCC2H7BZ55 1655 aa20.93■□□□□ 0.94
CHID1-201ENST00000323578 SHANK2Q9UPX8 1470 aa20.93■□□□□ 0.94
CHID1-201ENST00000323578 KDM5DQ9BY66 1539 aa20.92■□□□□ 0.94
CHID1-201ENST00000323578 CDCA8Q53HL2 280 aa20.92■□□□□ 0.94
CHID1-201ENST00000323578 TRAPPC8Q9Y2L5 1435 aa20.92■□□□□ 0.94
CHID1-201ENST00000323578 EIF5BO60841 1220 aaKnown RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms