RNA–Protein interactions for RNA: ENST00000322349.12

EEA1-201, Transcript of early endosome antigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EEA1, Length 9,875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEA1-201ENST00000322349 MFAP1P55081 439 aaKnown RBP12.71□□□□□ -0.37
EEA1-201ENST00000322349 SF3B2Q13435 895 aaKnown RBP12.71□□□□□ -0.38
EEA1-201ENST00000322349 FYB1O15117 783 aa12.7□□□□□ -0.38
EEA1-201ENST00000322349 NUTM2BA6NNL0 878 aaPredicted RBP12.7□□□□□ -0.38
EEA1-201ENST00000322349 NUTM2EB1AL46 878 aaPredicted RBP12.7□□□□□ -0.38
EEA1-201ENST00000322349 NUTM2AQ8IVF1 878 aaPredicted RBP12.7□□□□□ -0.38
EEA1-201ENST00000322349 KTN1Q86UP2 1357 aaKnown RBP12.7□□□□□ -0.38
EEA1-201ENST00000322349 USP35Q9P2H5 1018 aa12.7□□□□□ -0.38
EEA1-201ENST00000322349 SLC4A3P48751 1232 aa12.7□□□□□ -0.38
EEA1-201ENST00000322349 PPP4R2Q9NY27 417 aa12.7□□□□□ -0.38
EEA1-201ENST00000322349 HTATSF1O43719 755 aaKnown RBP12.7□□□□□ -0.38
EEA1-201ENST00000322349 TPD52L1Q16890 204 aaPredicted RBP12.7□□□□□ -0.38
EEA1-201ENST00000322349 HSPA5P11021 654 aaKnown RBP12.69□□□□□ -0.38
EEA1-201ENST00000322349 AKAP17AQ02040 695 aaKnown RBP12.69□□□□□ -0.38
EEA1-201ENST00000322349 RRP7AQ9Y3A4 280 aaKnown RBP12.69□□□□□ -0.38
EEA1-201ENST00000322349 FAM177BA6PVY3 158 aa12.69□□□□□ -0.38
EEA1-201ENST00000322349 RILPL2Q969X0 211 aa12.69□□□□□ -0.38
EEA1-201ENST00000322349 RBM33Q96EV2 1170 aaKnown RBP12.69□□□□□ -0.38
EEA1-201ENST00000322349 NUP155O75694 1391 aa12.69□□□□□ -0.38
EEA1-201ENST00000322349 APPP05067 770 aa12.69□□□□□ -0.38
EEA1-201ENST00000322349 SF3A1Q15459 793 aaKnown RBP12.68□□□□□ -0.38
EEA1-201ENST00000322349 MTMR7Q9Y216 660 aa12.68□□□□□ -0.38
EEA1-201ENST00000322349 CARMIL1Q5VZK9 1371 aa12.68□□□□□ -0.38
EEA1-201ENST00000322349 PIP4K2BP78356 416 aa12.68□□□□□ -0.38
EEA1-201ENST00000322349 ATF3P18847 181 aa12.68□□□□□ -0.38
EEA1-201ENST00000322349 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.67□□□□□ -0.38
EEA1-201ENST00000322349 NUTM2GQ5VZR2 741 aa12.67□□□□□ -0.38
EEA1-201ENST00000322349 TEFQ10587 303 aa12.66□□□□□ -0.38
EEA1-201ENST00000322349 FOXD4L6Q3SYB3 417 aaPredicted RBP12.66□□□□□ -0.38
EEA1-201ENST00000322349 FOXD4L3Q6VB84 417 aaPredicted RBP12.66□□□□□ -0.38
EEA1-201ENST00000322349 CCDC34Q96HJ3 373 aa12.66□□□□□ -0.38
EEA1-201ENST00000322349 CCAR1Q8IX12 1150 aaKnown RBP12.66□□□□□ -0.38
EEA1-201ENST00000322349 CFAP44Q96MT7 982 aa12.66□□□□□ -0.38
EEA1-201ENST00000322349 EEA1Q15075 1411 aa12.66□□□□□ -0.38
EEA1-201ENST00000322349 HMMRO75330 724 aa12.66□□□□□ -0.38
EEA1-201ENST00000322349 SLKQ9H2G2 1235 aaPredicted RBP12.65□□□□□ -0.38
EEA1-201ENST00000322349 CHMP4AQ9BY43 222 aa12.65□□□□□ -0.38
EEA1-201ENST00000322349 RWDD1Q9H446 243 aaPredicted RBP12.65□□□□□ -0.38
EEA1-201ENST00000322349 NOP58Q9Y2X3 529 aaKnown RBP12.65□□□□□ -0.38
EEA1-201ENST00000322349 CCDC43Q96MW1 224 aaKnown RBP12.64□□□□□ -0.39
EEA1-201ENST00000322349 MINK1Q8N4C8 1332 aaPredicted RBP12.64□□□□□ -0.39
EEA1-201ENST00000322349 H3BQV1 296 aa12.64□□□□□ -0.39
EEA1-201ENST00000322349 IFFO2Q5TF58 517 aa12.64□□□□□ -0.39
EEA1-201ENST00000322349 COG3Q96JB2 828 aa12.64□□□□□ -0.39
EEA1-201ENST00000322349 TDRD9Q8NDG6 1382 aaKnown RBP12.64□□□□□ -0.39
EEA1-201ENST00000322349 HDAC5Q9UQL6 1122 aa12.64□□□□□ -0.39
EEA1-201ENST00000322349 PLIN1O60240 522 aa12.64□□□□□ -0.39
EEA1-201ENST00000322349 SYNE3Q6ZMZ3 975 aa12.63□□□□□ -0.39
EEA1-201ENST00000322349 CCDC27Q2M243 656 aa12.63□□□□□ -0.39
EEA1-201ENST00000322349 KDM4AO75164 1064 aa12.62□□□□□ -0.39
EEA1-201ENST00000322349 EIF3AQ14152 1382 aaKnown RBP12.62□□□□□ -0.39
EEA1-201ENST00000322349 FAM69CQ0P6D2 419 aa12.62□□□□□ -0.39
EEA1-201ENST00000322349 PCMTD1Q96MG8 357 aaPredicted RBP12.62□□□□□ -0.39
EEA1-201ENST00000322349 CECR2Q9BXF3 1484 aa12.61□□□□□ -0.39
EEA1-201ENST00000322349 MCTP1Q6DN14 999 aa12.61□□□□□ -0.39
EEA1-201ENST00000322349 KIF16BQ96L93 1317 aa12.61□□□□□ -0.39
EEA1-201ENST00000322349 FAM184AQ8NB25 1140 aa12.61□□□□□ -0.39
EEA1-201ENST00000322349 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.61□□□□□ -0.397e-8■■■■■ 186.3
EEA1-201ENST00000322349 IKQ13123 557 aaPredicted RBP12.61□□□□□ -0.39
EEA1-201ENST00000322349 C9orf78Q9NZ63 289 aaPredicted RBP12.61□□□□□ -0.39
EEA1-201ENST00000322349 FOSBP53539 338 aa12.6□□□□□ -0.39
EEA1-201ENST00000322349 CEP164Q9UPV0 1460 aa12.6□□□□□ -0.39
EEA1-201ENST00000322349 TPM3P06753 285 aa12.6□□□□□ -0.39
EEA1-201ENST00000322349 LMOD3Q0VAK6 560 aa12.6□□□□□ -0.39
EEA1-201ENST00000322349 TCERG1O14776 1098 aaKnown RBP12.6□□□□□ -0.39
EEA1-201ENST00000322349 NEXNQ0ZGT2 675 aa12.6□□□□□ -0.39
EEA1-201ENST00000322349 STRN4Q9NRL3 753 aa12.6□□□□□ -0.39
EEA1-201ENST00000322349 DCAF1Q9Y4B6 1507 aa12.59□□□□□ -0.39
EEA1-201ENST00000322349 IBSPP21815 317 aaPredicted RBP12.59□□□□□ -0.39
EEA1-201ENST00000322349 TMEM132AQ24JP5 1023 aa12.59□□□□□ -0.39
EEA1-201ENST00000322349 PATL2C9JE40 543 aaKnown RBP12.59□□□□□ -0.39
EEA1-201ENST00000322349 BCL2L13Q9BXK5 485 aa12.59□□□□□ -0.39
EEA1-201ENST00000322349 FHAD1B1AJZ9 1412 aa12.59□□□□□ -0.39
EEA1-201ENST00000322349 AIMP1Q12904 312 aaKnown RBP12.59□□□□□ -0.39
EEA1-201ENST00000322349 MPHOSPH9Q99550 1183 aa12.59□□□□□ -0.39
EEA1-201ENST00000322349 GBP4Q96PP9 640 aa12.59□□□□□ -0.39
EEA1-201ENST00000322349 ARHGAP35Q9NRY4 1499 aa12.58□□□□□ -0.4
EEA1-201ENST00000322349 RCAN3Q9UKA8 241 aa12.58□□□□□ -0.4
EEA1-201ENST00000322349 SOGA1O94964 1423 aa12.57□□□□□ -0.4
EEA1-201ENST00000322349 ZNF428Q96B54 188 aa12.57□□□□□ -0.4
EEA1-201ENST00000322349 NFXL1Q6ZNB6 911 aa12.57□□□□□ -0.4
EEA1-201ENST00000322349 TPM2P07951 284 aa12.57□□□□□ -0.4
EEA1-201ENST00000322349 PMFBP1Q8TBY8 1022 aa12.57□□□□□ -0.4
EEA1-201ENST00000322349 ANKRD30AQ9BXX3 1397 aa12.56□□□□□ -0.4
EEA1-201ENST00000322349 PAF1Q8N7H5 531 aa12.56□□□□□ -0.4
EEA1-201ENST00000322349 GOLGA6L1Q8N7Z2 621 aa12.56□□□□□ -0.4
EEA1-201ENST00000322349 NLRP2Q9NX02 1062 aa12.56□□□□□ -0.4
EEA1-201ENST00000322349 TSR1Q2NL82 804 aaKnown RBP12.56□□□□□ -0.4
EEA1-201ENST00000322349 CCAR2Q8N163 923 aaKnown RBP12.56□□□□□ -0.4
EEA1-201ENST00000322349 SYAP1Q96A49 352 aaPredicted RBP12.56□□□□□ -0.4
EEA1-201ENST00000322349 OSCARQ8IYS5 282 aa12.55□□□□□ -0.4
EEA1-201ENST00000322349 RBM42Q9BTD8 480 aaKnown RBP12.55□□□□□ -0.4
EEA1-201ENST00000322349 TRIM29Q14134 588 aa12.55□□□□□ -0.4
EEA1-201ENST00000322349 PDS5BQ9NTI5 1447 aa12.54□□□□□ -0.4
EEA1-201ENST00000322349 ANKRD45Q5TZF3 282 aa12.54□□□□□ -0.4
EEA1-201ENST00000322349 R3HCC1Q9Y3T6 440 aaKnown RBP12.54□□□□□ -0.4
EEA1-201ENST00000322349 CSPP1Q1MSJ5 1256 aa12.54□□□□□ -0.4
EEA1-201ENST00000322349 RAPGEF4Q8WZA2 1011 aa12.53□□□□□ -0.4
EEA1-201ENST00000322349 CENPJQ9HC77 1338 aaPredicted RBP12.52□□□□□ -0.4
EEA1-201ENST00000322349 ERICH2A1L162 156 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms