RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 BCL2L13Q9BXK5 485 aa14.37□□□□□ -0.11
TOP3A-201ENST00000321105 SYNJ2O15056 1496 aa14.37□□□□□ -0.11
TOP3A-201ENST00000321105 GRIN2AQ12879 1464 aa14.37□□□□□ -0.11
TOP3A-201ENST00000321105 ARHGAP5Q13017 1502 aa14.37□□□□□ -0.11
TOP3A-201ENST00000321105 SCAPERQ9BY12 1400 aa14.36□□□□□ -0.11
TOP3A-201ENST00000321105 NUDCQ9Y266 331 aa14.36□□□□□ -0.11
TOP3A-201ENST00000321105 EHBP1L1Q8N3D4 1523 aa14.36□□□□□ -0.11
TOP3A-201ENST00000321105 A0A0G2JS52 829 aa14.36□□□□□ -0.11
TOP3A-201ENST00000321105 ABCC5O15440 1437 aa14.36□□□□□ -0.11
TOP3A-201ENST00000321105 FTSJ3Q8IY81 847 aaKnown RBP14.35□□□□□ -0.11
TOP3A-201ENST00000321105 MIA2Q96PC5 1412 aa14.34□□□□□ -0.11
TOP3A-201ENST00000321105 CDCA7LQ96GN5 454 aa14.33□□□□□ -0.11
TOP3A-201ENST00000321105 MYBBP1AQ9BQG0 1328 aaKnown RBP14.33□□□□□ -0.12
TOP3A-201ENST00000321105 APAF1O14727 1248 aa14.33□□□□□ -0.12
TOP3A-201ENST00000321105 THOC2Q8NI27 1593 aaKnown RBP14.32□□□□□ -0.12
TOP3A-201ENST00000321105 EXOC6Q8TAG9 804 aa14.3□□□□□ -0.12
TOP3A-201ENST00000321105 PAK3O75914 559 aaPredicted RBP14.3□□□□□ -0.12
TOP3A-201ENST00000321105 ELL2O00472 640 aaPredicted RBP14.3□□□□□ -0.12
TOP3A-201ENST00000321105 HSP90AA1P07900 732 aaKnown RBP14.3□□□□□ -0.12
TOP3A-201ENST00000321105 KIAA1107Q9UPP5 1409 aa14.29□□□□□ -0.12
TOP3A-201ENST00000321105 ANKRD30BQ9BXX2 1392 aa14.29□□□□□ -0.12
TOP3A-201ENST00000321105 UPF2Q9HAU5 1272 aaKnown RBP14.28□□□□□ -0.12
TOP3A-201ENST00000321105 CABP2Q9NPB3 220 aa14.28□□□□□ -0.12
TOP3A-201ENST00000321105 HECW1Q76N89 1606 aa14.28□□□□□ -0.12
TOP3A-201ENST00000321105 SUPT6HQ7KZ85 1726 aaKnown RBP14.28□□□□□ -0.12
TOP3A-201ENST00000321105 CNTLNQ9NXG0 1405 aa14.28□□□□□ -0.12
TOP3A-201ENST00000321105 GOLGA2Q08379 1002 aa14.27□□□□□ -0.12
TOP3A-201ENST00000321105 ADAMTS8Q9UP79 889 aa14.27□□□□□ -0.12
TOP3A-201ENST00000321105 NCOA1Q15788 1441 aa14.27□□□□□ -0.13
TOP3A-201ENST00000321105 ZBED9Q6R2W3 1325 aa14.27□□□□□ -0.13
TOP3A-201ENST00000321105 SLC12A5Q9H2X9 1139 aa14.27□□□□□ -0.13
TOP3A-201ENST00000321105 CUL7Q14999 1698 aa14.27□□□□□ -0.13
TOP3A-201ENST00000321105 MAGI1Q96QZ7 1491 aaPredicted RBP14.26□□□□□ -0.13
TOP3A-201ENST00000321105 PTPN23Q9H3S7 1636 aa14.26□□□□□ -0.13
TOP3A-201ENST00000321105 HDGFL2Q7Z4V5 671 aaPredicted RBP14.26□□□□□ -0.13
TOP3A-201ENST00000321105 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.26□□□□□ -0.13
TOP3A-201ENST00000321105 MAPKBP1O60336 1514 aa14.26□□□□□ -0.13
TOP3A-201ENST00000321105 GGNBP2Q9H3C7 697 aa14.26□□□□□ -0.13
TOP3A-201ENST00000321105 APBB1O00213 710 aa14.25□□□□□ -0.13
TOP3A-201ENST00000321105 TCERG1O14776 1098 aaKnown RBP14.25□□□□□ -0.13
TOP3A-201ENST00000321105 VGFO15240 615 aaPredicted RBP14.24□□□□□ -0.13
TOP3A-201ENST00000321105 CAMSAP2Q08AD1 1489 aa14.24□□□□□ -0.13
TOP3A-201ENST00000321105 LTV1Q96GA3 475 aaPredicted RBP14.23□□□□□ -0.13
TOP3A-201ENST00000321105 NUP153P49790 1475 aaKnown RBP14.22□□□□□ -0.13
TOP3A-201ENST00000321105 ANP32EQ9BTT0 268 aa14.22□□□□□ -0.13
TOP3A-201ENST00000321105 EIF3AQ14152 1382 aaKnown RBP14.22□□□□□ -0.13
TOP3A-201ENST00000321105 CENPJQ9HC77 1338 aaPredicted RBP14.21□□□□□ -0.13
TOP3A-201ENST00000321105 MAP3K1Q13233 1512 aa14.21□□□□□ -0.13
TOP3A-201ENST00000321105 SPRYD3Q8NCJ5 442 aa14.2□□□□□ -0.14
TOP3A-201ENST00000321105 GPATCH8Q9UKJ3 1502 aaKnown RBP14.2□□□□□ -0.14
TOP3A-201ENST00000321105 CRBNQ96SW2 442 aa14.2□□□□□ -0.14
TOP3A-201ENST00000321105 PNISRQ8TF01 805 aaKnown RBP14.19□□□□□ -0.14
TOP3A-201ENST00000321105 TERF2IPQ9NYB0 399 aa14.19□□□□□ -0.14
TOP3A-201ENST00000321105 ATP10BO94823 1461 aa14.19□□□□□ -0.14
TOP3A-201ENST00000321105 MYH16Q9H6N6 1097 aa14.18□□□□□ -0.14
TOP3A-201ENST00000321105 HAP1P54257 671 aaPredicted RBP14.18□□□□□ -0.14
TOP3A-201ENST00000321105 PLEKHH2Q8IVE3 1493 aa14.18□□□□□ -0.14
TOP3A-201ENST00000321105 COG6Q9Y2V7 657 aa14.17□□□□□ -0.14
TOP3A-201ENST00000321105 KIF21AQ7Z4S6 1674 aa14.17□□□□□ -0.14
TOP3A-201ENST00000321105 AKNAQ7Z591 1439 aa14.17□□□□□ -0.14
TOP3A-201ENST00000321105 RRP1P56182 461 aaKnown RBP14.17□□□□□ -0.14
TOP3A-201ENST00000321105 ROCK1Q13464 1354 aa14.17□□□□□ -0.14
TOP3A-201ENST00000321105 NGDNQ8NEJ9 315 aaKnown RBP14.17□□□□□ -0.14
TOP3A-201ENST00000321105 MTHFSP49914 203 aa14.16□□□□□ -0.14
TOP3A-201ENST00000321105 HDGFP51858 240 aaKnown RBP14.16□□□□□ -0.14
TOP3A-201ENST00000321105 ITPRIPQ8IWB1 547 aa14.16□□□□□ -0.14
TOP3A-201ENST00000321105 SMC4Q9NTJ3 1288 aa14.16□□□□□ -0.14
TOP3A-201ENST00000321105 HMOX1P09601 288 aa14.15□□□□□ -0.14
TOP3A-201ENST00000321105 EVC2Q86UK5 1308 aa14.15□□□□□ -0.14
TOP3A-201ENST00000321105 NOP58Q9Y2X3 529 aaKnown RBP14.15□□□□□ -0.14
TOP3A-201ENST00000321105 NUTM2GQ5VZR2 741 aa14.15□□□□□ -0.14
TOP3A-201ENST00000321105 PPP2R1AP30153 589 aa14.15□□□□□ -0.14
TOP3A-201ENST00000321105 FBXO31Q5XUX0 539 aaPredicted RBP14.15□□□□□ -0.14
TOP3A-201ENST00000321105 SLC4A3P48751 1232 aa14.14□□□□□ -0.15
TOP3A-201ENST00000321105 TPRNQ4KMQ1 711 aa14.14□□□□□ -0.15
TOP3A-201ENST00000321105 SKAP1Q86WV1 359 aa14.14□□□□□ -0.15
TOP3A-201ENST00000321105 ADGRF5Q8IZF2 1346 aa14.14□□□□□ -0.15
TOP3A-201ENST00000321105 PRAM1Q96QH2 718 aa14.14□□□□□ -0.15
TOP3A-201ENST00000321105 CGNL1Q0VF96 1302 aa14.14□□□□□ -0.15
TOP3A-201ENST00000321105 TXNDC2Q86VQ3 553 aa14.12□□□□□ -0.15
TOP3A-201ENST00000321105 CCDC141Q6ZP82 1450 aa14.11□□□□□ -0.15
TOP3A-201ENST00000321105 UGGT2Q9NYU1 1516 aa14.11□□□□□ -0.15
TOP3A-201ENST00000321105 PDE3BQ13370 1112 aa14.1□□□□□ -0.15
TOP3A-201ENST00000321105 SLC26A8Q96RN1 970 aa14.1□□□□□ -0.15
TOP3A-201ENST00000321105 EID1Q9Y6B2 187 aa14.1□□□□□ -0.15
TOP3A-201ENST00000321105 RPRD2Q5VT52 1461 aaKnown RBP14.09□□□□□ -0.15
TOP3A-201ENST00000321105 PANK1Q8TE04 598 aa14.09□□□□□ -0.15
TOP3A-201ENST00000321105 DISP1Q96F81 1524 aa14.08□□□□□ -0.16
TOP3A-201ENST00000321105 FBLN1P23142 703 aa14.07□□□□□ -0.16
TOP3A-201ENST00000321105 AMPHP49418 695 aa14.07□□□□□ -0.16
TOP3A-201ENST00000321105 SLC4A10Q6U841 1118 aa14.07□□□□□ -0.16
TOP3A-201ENST00000321105 WAPLQ7Z5K2 1190 aa14.07□□□□□ -0.16
TOP3A-201ENST00000321105 TCP11L2Q8N4U5 519 aa14.07□□□□□ -0.16
TOP3A-201ENST00000321105 RTF1Q92541 710 aaKnown RBP14.07□□□□□ -0.16
TOP3A-201ENST00000321105 RBM33Q96EV2 1170 aaKnown RBP14.07□□□□□ -0.16
TOP3A-201ENST00000321105 CABP1Q9NZU7 370 aa14.07□□□□□ -0.16
TOP3A-201ENST00000321105 MAGI3Q5TCQ9 1506 aa14.07□□□□□ -0.16
TOP3A-201ENST00000321105 IDI1Q13907 227 aa14.07□□□□□ -0.16
TOP3A-201ENST00000321105 NECTIN2Q92692 538 aa14.07□□□□□ -0.16
TOP3A-201ENST00000321105 BCAR3O75815 825 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms