RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 RAB3GAP2Q9H2M9 1393 aa11.09□□□□□ -0.63
SSBP2-201ENST00000320672 GTF2E1P29083 439 aaPredicted RBP11.09□□□□□ -0.63
SSBP2-201ENST00000320672 ST20-MTHFSA0A0A6YYL1 179 aa11.08□□□□□ -0.63
SSBP2-201ENST00000320672 CARMIL1Q5VZK9 1371 aa11.08□□□□□ -0.64
SSBP2-201ENST00000320672 CUX2O14529 1486 aa11.08□□□□□ -0.64
SSBP2-201ENST00000320672 NOC3LQ8WTT2 800 aaKnown RBP11.07□□□□□ -0.64
SSBP2-201ENST00000320672 CCAR2Q8N163 923 aaKnown RBP11.07□□□□□ -0.64
SSBP2-201ENST00000320672 CCDC88BA6NC98 1476 aa11.07□□□□□ -0.64
SSBP2-201ENST00000320672 STK31Q9BXU1 1019 aa11.07□□□□□ -0.64
SSBP2-201ENST00000320672 RWDD1Q9H446 243 aaPredicted RBP11.07□□□□□ -0.64
SSBP2-201ENST00000320672 HMOX1P09601 288 aa11.06□□□□□ -0.64
SSBP2-201ENST00000320672 MPNDQ8N594 471 aa11.06□□□□□ -0.64
SSBP2-201ENST00000320672 KIF27Q86VH2 1401 aa11.06□□□□□ -0.64
SSBP2-201ENST00000320672 CHAF1AQ13111 956 aaPredicted RBP11.06□□□□□ -0.64
SSBP2-201ENST00000320672 APAF1O14727 1248 aa11.06□□□□□ -0.64
SSBP2-201ENST00000320672 FYB1O15117 783 aa11.05□□□□□ -0.64
SSBP2-201ENST00000320672 L1TD1Q5T7N2 865 aaKnown RBP11.05□□□□□ -0.64
SSBP2-201ENST00000320672 EEA1Q15075 1411 aa11.05□□□□□ -0.64
SSBP2-201ENST00000320672 ZNF592Q92610 1267 aa11.05□□□□□ -0.64
SSBP2-201ENST00000320672 USP35Q9P2H5 1018 aa11.05□□□□□ -0.64
SSBP2-201ENST00000320672 MCTP1Q6DN14 999 aa11.04□□□□□ -0.64
SSBP2-201ENST00000320672 RB1CC1Q8TDY2 1594 aa11.04□□□□□ -0.64
SSBP2-201ENST00000320672 CYB5RLQ6IPT4 315 aa11.04□□□□□ -0.64
SSBP2-201ENST00000320672 ABCC8Q09428 1581 aa11.04□□□□□ -0.64
SSBP2-201ENST00000320672 AIMP1Q12904 312 aaKnown RBP11.04□□□□□ -0.64
SSBP2-201ENST00000320672 GOLGA6L3A6NEY3 463 aa11.04□□□□□ -0.64
SSBP2-201ENST00000320672 SETD5Q9C0A6 1442 aa11.04□□□□□ -0.64
SSBP2-201ENST00000320672 MARCH6O60337 910 aa11.04□□□□□ -0.64
SSBP2-201ENST00000320672 WASHC2CQ9Y4E1 1318 aa11.03□□□□□ -0.64
SSBP2-201ENST00000320672 KANK1Q14678 1352 aa11.03□□□□□ -0.64
SSBP2-201ENST00000320672 CENPJQ9HC77 1338 aaPredicted RBP11.03□□□□□ -0.64
SSBP2-201ENST00000320672 IPO8O15397 1037 aaKnown RBP11.02□□□□□ -0.64
SSBP2-201ENST00000320672 MS4A1P11836 297 aa11.02□□□□□ -0.64
SSBP2-201ENST00000320672 DHX37Q8IY37 1157 aaKnown RBP11.02□□□□□ -0.65
SSBP2-201ENST00000320672 CALD1Q05682 793 aaKnown RBP11.01□□□□□ -0.65
SSBP2-201ENST00000320672 IPO9Q96P70 1041 aaKnown RBP11.01□□□□□ -0.65
SSBP2-201ENST00000320672 A0A0U1RQG5 324 aaPredicted RBP11.01□□□□□ -0.65
SSBP2-201ENST00000320672 GBP4Q96PP9 640 aa11.01□□□□□ -0.65
SSBP2-201ENST00000320672 MROH2BQ7Z745 1585 aa11□□□□□ -0.65
SSBP2-201ENST00000320672 SF3A1Q15459 793 aaKnown RBP11□□□□□ -0.65
SSBP2-201ENST00000320672 EVA1CP58658 441 aa11□□□□□ -0.65
SSBP2-201ENST00000320672 SKAP1Q86WV1 359 aa11□□□□□ -0.65
SSBP2-201ENST00000320672 TMEM132EQ6IEE7 984 aa11□□□□□ -0.65
SSBP2-201ENST00000320672 NRDCO43847 1150 aa10.99□□□□□ -0.65
SSBP2-201ENST00000320672 PDE4AP27815 886 aa10.99□□□□□ -0.65
SSBP2-201ENST00000320672 KIAA2012Q0VF49 1180 aa10.99□□□□□ -0.65
SSBP2-201ENST00000320672 FHOD3Q2V2M9 1422 aa10.99□□□□□ -0.65
SSBP2-201ENST00000320672 CCER2I3L3R5 266 aa10.98□□□□□ -0.65
SSBP2-201ENST00000320672 GGNBP2Q9H3C7 697 aa10.98□□□□□ -0.65
SSBP2-201ENST00000320672 APPP05067 770 aa10.98□□□□□ -0.65
SSBP2-201ENST00000320672 C1orf115Q9H7X2 142 aa10.98□□□□□ -0.65
SSBP2-201ENST00000320672 CEP164Q9UPV0 1460 aa10.97□□□□□ -0.65
SSBP2-201ENST00000320672 SPAG9O60271 1321 aaKnown RBP10.97□□□□□ -0.65
SSBP2-201ENST00000320672 PANK1Q8TE04 598 aa10.97□□□□□ -0.65
SSBP2-201ENST00000320672 DDX49Q9Y6V7 483 aaKnown RBP10.97□□□□□ -0.65
SSBP2-201ENST00000320672 RUSC2Q8N2Y8 1516 aa10.97□□□□□ -0.65
SSBP2-201ENST00000320672 LNPKQ9C0E8 428 aa10.97□□□□□ -0.65
SSBP2-201ENST00000320672 SKIDA1Q1XH10 827 aa10.97□□□□□ -0.65
SSBP2-201ENST00000320672 H3BQV1 296 aa10.96□□□□□ -0.65
SSBP2-201ENST00000320672 IFFO2Q5TF58 517 aa10.96□□□□□ -0.65
SSBP2-201ENST00000320672 ZNF644Q9H582 1327 aaPredicted RBP10.96□□□□□ -0.65
SSBP2-201ENST00000320672 DHX16O60231 1041 aaKnown RBP10.96□□□□□ -0.65
SSBP2-201ENST00000320672 MAP4K4O95819 1239 aaPredicted RBP10.96□□□□□ -0.65
SSBP2-201ENST00000320672 PMFBP1Q8TBY8 1022 aa10.96□□□□□ -0.65
SSBP2-201ENST00000320672 CDCA7LQ96GN5 454 aa10.96□□□□□ -0.66
SSBP2-201ENST00000320672 CHMP4BQ9H444 224 aaKnown RBP10.96□□□□□ -0.66
SSBP2-201ENST00000320672 CABP2Q9NPB3 220 aa10.95□□□□□ -0.66
SSBP2-201ENST00000320672 FAM161AQ3B820 660 aa10.95□□□□□ -0.66
SSBP2-201ENST00000320672 HDGFP51858 240 aaKnown RBP10.95□□□□□ -0.66
SSBP2-201ENST00000320672 ANO2Q9NQ90 1003 aa10.95□□□□□ -0.66
SSBP2-201ENST00000320672 CCDC27Q2M243 656 aa10.94□□□□□ -0.66
SSBP2-201ENST00000320672 VSIG10Q8N0Z9 540 aa10.94□□□□□ -0.66
SSBP2-201ENST00000320672 FAM184AQ8NB25 1140 aa10.94□□□□□ -0.66
SSBP2-201ENST00000320672 TMX4Q9H1E5 349 aaPredicted RBP10.94□□□□□ -0.66
SSBP2-201ENST00000320672 TTLL5Q6EMB2 1281 aa10.93□□□□□ -0.66
SSBP2-201ENST00000320672 PHF23Q9BUL5 403 aaPredicted RBP10.93□□□□□ -0.66
SSBP2-201ENST00000320672 ATP2B1P20020 1258 aa10.93□□□□□ -0.66
SSBP2-201ENST00000320672 TPD52L1Q16890 204 aaPredicted RBP10.93□□□□□ -0.66
SSBP2-201ENST00000320672 RIPK4P57078 832 aa10.93□□□□□ -0.66
SSBP2-201ENST00000320672 EFCAB2Q5VUJ9 269 aa10.93□□□□□ -0.66
SSBP2-201ENST00000320672 RNF214Q8ND24 703 aa10.93□□□□□ -0.66
SSBP2-201ENST00000320672 PCMTD1Q96MG8 357 aaPredicted RBP10.93□□□□□ -0.66
SSBP2-201ENST00000320672 PPP1R1BQ9UD71 204 aaPredicted RBP10.93□□□□□ -0.66
SSBP2-201ENST00000320672 KIF16BQ96L93 1317 aa10.92□□□□□ -0.66
SSBP2-201ENST00000320672 VPS37CA5D8V6 355 aaPredicted RBP10.92□□□□□ -0.66
SSBP2-201ENST00000320672 TNNT3P45378 269 aaPredicted RBP10.92□□□□□ -0.66
SSBP2-201ENST00000320672 NEUROD6Q96NK8 337 aa10.92□□□□□ -0.66
SSBP2-201ENST00000320672 RALBP1Q15311 655 aa10.91□□□□□ -0.66
SSBP2-201ENST00000320672 ARHGAP35Q9NRY4 1499 aa10.91□□□□□ -0.66
SSBP2-201ENST00000320672 TERF2IPQ9NYB0 399 aa10.91□□□□□ -0.66
SSBP2-201ENST00000320672 EID1Q9Y6B2 187 aa10.91□□□□□ -0.66
SSBP2-201ENST00000320672 C1orf141Q5JVX7 400 aa10.91□□□□□ -0.66
SSBP2-201ENST00000320672 RBM33Q96EV2 1170 aaKnown RBP10.9□□□□□ -0.66
SSBP2-201ENST00000320672 C9orf78Q9NZ63 289 aaPredicted RBP10.9□□□□□ -0.66
SSBP2-201ENST00000320672 RRP1P56182 461 aaKnown RBP10.9□□□□□ -0.66
SSBP2-201ENST00000320672 FKBP5Q13451 457 aaPredicted RBP10.9□□□□□ -0.66
SSBP2-201ENST00000320672 SPINK5Q9NQ38 1064 aaPredicted RBP10.9□□□□□ -0.66
SSBP2-201ENST00000320672 CEBPZQ03701 1054 aaKnown RBP10.9□□□□□ -0.66
SSBP2-201ENST00000320672 TEFQ10587 303 aa10.9□□□□□ -0.66
SSBP2-201ENST00000320672 COG3Q96JB2 828 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms