RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 CARD11Q9BXL7 1154 aa26.44■■□□□ 1.82
ZNF554-201ENST00000317243 PPP4R2Q9NY27 417 aa26.42■■□□□ 1.82
ZNF554-201ENST00000317243 FAM135AQ9P2D6 1515 aa26.42■■□□□ 1.82
ZNF554-201ENST00000317243 PLEKHH2Q8IVE3 1493 aa26.4■■□□□ 1.82
ZNF554-201ENST00000317243 ST20-MTHFSA0A0A6YYL1 179 aa26.39■■□□□ 1.81
ZNF554-201ENST00000317243 B4GALNT3Q6L9W6 998 aa26.39■■□□□ 1.81
ZNF554-201ENST00000317243 KDM5CP41229 1560 aa26.39■■□□□ 1.81
ZNF554-201ENST00000317243 KDM5DQ9BY66 1539 aa26.38■■□□□ 1.81
ZNF554-201ENST00000317243 ZCCHC11Q5TAX3 1644 aaKnown RBP26.36■■□□□ 1.81
ZNF554-201ENST00000317243 ANO8Q9HCE9 1232 aaPredicted RBP26.36■■□□□ 1.81
ZNF554-201ENST00000317243 MYO5CQ9NQX4 1742 aa26.35■■□□□ 1.81
ZNF554-201ENST00000317243 PAK3O75914 559 aaPredicted RBP26.35■■□□□ 1.81
ZNF554-201ENST00000317243 POLR1AO95602 1720 aaPredicted RBP26.35■■□□□ 1.81
ZNF554-201ENST00000317243 DHX29Q7Z478 1369 aaKnown RBP26.34■■□□□ 1.81
ZNF554-201ENST00000317243 NBPF1Q3BBV0 1214 aa26.34■■□□□ 1.81
ZNF554-201ENST00000317243 NOP58Q9Y2X3 529 aaKnown RBP26.34■■□□□ 1.81
ZNF554-201ENST00000317243 PLA2R1Q13018 1463 aa26.33■■□□□ 1.81
ZNF554-201ENST00000317243 ERICH6BQ5W0A0 696 aa26.32■■□□□ 1.8
ZNF554-201ENST00000317243 AFAP1Q8N556 730 aa26.32■■□□□ 1.8
ZNF554-201ENST00000317243 CLASP1Q7Z460 1538 aa26.32■■□□□ 1.8
ZNF554-201ENST00000317243 TRAPPC8Q9Y2L5 1435 aa26.31■■□□□ 1.8
ZNF554-201ENST00000317243 RALGAPBQ86X10 1494 aa26.31■■□□□ 1.8
ZNF554-201ENST00000317243 UHRF1BP1Q6BDS2 1440 aa26.3■■□□□ 1.8
ZNF554-201ENST00000317243 RSPH4AQ5TD94 716 aa26.29■■□□□ 1.8
ZNF554-201ENST00000317243 CCDC144AA2RUR9 1427 aa26.28■■□□□ 1.8
ZNF554-201ENST00000317243 ROCK2O75116 1388 aaKnown RBP26.27■■□□□ 1.8
ZNF554-201ENST00000317243 PLCH2O75038 1416 aa26.25■■□□□ 1.79
ZNF554-201ENST00000317243 EFCAB2Q5VUJ9 269 aa26.24■■□□□ 1.79
ZNF554-201ENST00000317243 MAST1Q9Y2H9 1570 aa26.2■■□□□ 1.79
ZNF554-201ENST00000317243 UNC13BO14795 1591 aa26.2■■□□□ 1.78
ZNF554-201ENST00000317243 A2MP01023 1474 aa26.19■■□□□ 1.78
ZNF554-201ENST00000317243 ZBED9Q6R2W3 1325 aa26.19■■□□□ 1.78
ZNF554-201ENST00000317243 PRAG1Q86YV5 1406 aa26.18■■□□□ 1.78
ZNF554-201ENST00000317243 SALL2Q9Y467 1007 aaPredicted RBP26.16■■□□□ 1.78
ZNF554-201ENST00000317243 PLXNC1O60486 1568 aa26.16■■□□□ 1.78
ZNF554-201ENST00000317243 ABCC1P33527 1531 aa26.15■■□□□ 1.78
ZNF554-201ENST00000317243 SPAG9O60271 1321 aaKnown RBP26.14■■□□□ 1.77
ZNF554-201ENST00000317243 DUOX2Q9NRD8 1548 aa26.13■■□□□ 1.77
ZNF554-201ENST00000317243 IQGAP3Q86VI3 1631 aa26.12■■□□□ 1.77
ZNF554-201ENST00000317243 TRPM1Q7Z4N2 1603 aa26.12■■□□□ 1.77
ZNF554-201ENST00000317243 UHRF1BP1LA0JNW5 1464 aa26.12■■□□□ 1.77
ZNF554-201ENST00000317243 RTL5Q5HYW3 569 aaPredicted RBP26.08■■□□□ 1.77
ZNF554-201ENST00000317243 DISP3Q9P2K9 1392 aa26.06■■□□□ 1.76
ZNF554-201ENST00000317243 IL27Q8NEV9 243 aa26.06■■□□□ 1.76
ZNF554-201ENST00000317243 ERBINQ96RT1 1412 aa26.06■■□□□ 1.76
ZNF554-201ENST00000317243 TMC1Q8TDI8 760 aa26.05■■□□□ 1.76
ZNF554-201ENST00000317243 IPO9Q96P70 1041 aaKnown RBP26.04■■□□□ 1.76
ZNF554-201ENST00000317243 ANP32AP39687 249 aaKnown RBP26.03■■□□□ 1.76
ZNF554-201ENST00000317243 MAGI2Q86UL8 1455 aa26.03■■□□□ 1.76
ZNF554-201ENST00000317243 PNISRQ8TF01 805 aaKnown RBP26.02■■□□□ 1.76
ZNF554-201ENST00000317243 RTN4Q9NQC3 1192 aaKnown RBP26.02■■□□□ 1.76
ZNF554-201ENST00000317243 ARID4BQ4LE39 1312 aaPredicted RBP26.02■■□□□ 1.76
ZNF554-201ENST00000317243 TESK2Q96S53 571 aa26.02■■□□□ 1.76
ZNF554-201ENST00000317243 WDR7Q9Y4E6 1490 aa26.02■■□□□ 1.76
ZNF554-201ENST00000317243 SCAPERQ9BY12 1400 aa26.01■■□□□ 1.75
ZNF554-201ENST00000317243 ZFYVE16Q7Z3T8 1539 aa26.01■■□□□ 1.75
ZNF554-201ENST00000317243 FANCAO15360 1455 aa26.01■■□□□ 1.75
ZNF554-201ENST00000317243 CCDC136Q96JN2 1154 aa26.01■■□□□ 1.75
ZNF554-201ENST00000317243 KIF3BO15066 747 aa26.01■■□□□ 1.75
ZNF554-201ENST00000317243 ZBTB47Q9UFB7 747 aaPredicted RBP26.01■■□□□ 1.75
ZNF554-201ENST00000317243 E9PCH4 1651 aa26■■□□□ 1.75
ZNF554-201ENST00000317243 CC2D1BQ5T0F9 858 aaKnown RBP25.99■■□□□ 1.75
ZNF554-201ENST00000317243 ASXL2Q76L83 1435 aa25.95■■□□□ 1.74
ZNF554-201ENST00000317243 ATP10AO60312 1499 aa25.95■■□□□ 1.74
ZNF554-201ENST00000317243 GPRASP1Q5JY77 1395 aa25.94■■□□□ 1.74
ZNF554-201ENST00000317243 PER1O15534 1290 aaPredicted RBP25.93■■□□□ 1.74
ZNF554-201ENST00000317243 NUDCQ9Y266 331 aa25.93■■□□□ 1.74
ZNF554-201ENST00000317243 PANK3Q9H999 370 aa25.92■■□□□ 1.74
ZNF554-201ENST00000317243 ADGRL1O94910 1474 aa25.92■■□□□ 1.74
ZNF554-201ENST00000317243 UGGT1Q9NYU2 1555 aa25.92■■□□□ 1.74
ZNF554-201ENST00000317243 PRDM15P57071 1507 aaPredicted RBP25.92■■□□□ 1.74
ZNF554-201ENST00000317243 MYBBP1AQ9BQG0 1328 aaKnown RBP25.91■■□□□ 1.74
ZNF554-201ENST00000317243 SMG6Q86US8 1419 aaKnown RBP25.91■■□□□ 1.74
ZNF554-201ENST00000317243 ATP7AQ04656 1500 aa25.9■■□□□ 1.74
ZNF554-201ENST00000317243 CLTCL1P53675 1640 aa25.88■■□□□ 1.73
ZNF554-201ENST00000317243 ABCA9Q8IUA7 1624 aa25.88■■□□□ 1.73
ZNF554-201ENST00000317243 COL17A1Q9UMD9 1497 aaPredicted RBP25.88■■□□□ 1.73
ZNF554-201ENST00000317243 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.86■■□□□ 1.73
ZNF554-201ENST00000317243 RTEL1-TNFRSF6BF6WH68 1400 aa25.86■■□□□ 1.73
ZNF554-201ENST00000317243 INO80Q9ULG1 1556 aaPredicted RBP25.84■■□□□ 1.73
ZNF554-201ENST00000317243 RALBP1Q15311 655 aa25.83■■□□□ 1.73
ZNF554-201ENST00000317243 KTN1Q86UP2 1357 aaKnown RBP25.83■■□□□ 1.73
ZNF554-201ENST00000317243 CFAP65Q6ZU64 1925 aaKnown RBP25.83■■□□□ 1.73
ZNF554-201ENST00000317243 SPHKAPQ2M3C7 1700 aa25.83■■□□□ 1.72
ZNF554-201ENST00000317243 MADDQ8WXG6 1647 aa25.82■■□□□ 1.72
ZNF554-201ENST00000317243 PARD3Q8TEW0 1356 aa25.81■■□□□ 1.72
ZNF554-201ENST00000317243 NPM2Q86SE8 214 aaKnown RBP25.81■■□□□ 1.72
ZNF554-201ENST00000317243 TMF1P82094 1093 aa25.81■■□□□ 1.72
ZNF554-201ENST00000317243 TRPM2O94759 1503 aa25.81■■□□□ 1.72
ZNF554-201ENST00000317243 LRPPRCP42704 1394 aaKnown RBP25.81■■□□□ 1.72
ZNF554-201ENST00000317243 ARAP3Q8WWN8 1544 aa25.8■■□□□ 1.72
ZNF554-201ENST00000317243 BRD4O60885 1362 aaPredicted RBP25.8■■□□□ 1.72
ZNF554-201ENST00000317243 OSCARQ8IYS5 282 aa25.79■■□□□ 1.72
ZNF554-201ENST00000317243 DEPDC5O75140 1603 aa25.79■■□□□ 1.72
ZNF554-201ENST00000317243 EIF2AK4Q9P2K8 1649 aaKnown RBP25.79■■□□□ 1.72
ZNF554-201ENST00000317243 CFAP70Q5T0N1 1121 aa25.79■■□□□ 1.72
ZNF554-201ENST00000317243 SENP3Q9H4L4 574 aaPredicted RBP25.78■■□□□ 1.72
ZNF554-201ENST00000317243 LAS1LQ9Y4W2 734 aaKnown RBP25.78■■□□□ 1.72
ZNF554-201ENST00000317243 PTPRTO14522 1441 aa25.78■■□□□ 1.72
ZNF554-201ENST00000317243 MROH1Q8NDA8 1641 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms