RNA–Protein interactions for RNA: ENST00000316848.9

MINDY2-201, Transcript of MINDY lysine 48 deubiquitinase 2, humanhuman

TSL 1 (best)

Gene MINDY2, Length 4,866 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY2-201ENST00000316848 MFAP1P55081 439 aaKnown RBP22.56■■□□□ 1.2
MINDY2-201ENST00000316848 SLC4A10Q6U841 1118 aa22.56■■□□□ 1.2
MINDY2-201ENST00000316848 VGFO15240 615 aaPredicted RBP22.55■■□□□ 1.2
MINDY2-201ENST00000316848 TRIM6-TRIM34B2RNG4 842 aa22.54■■□□□ 1.2
MINDY2-201ENST00000316848 TAF7LQ5H9L4 462 aa22.54■■□□□ 1.2
MINDY2-201ENST00000316848 DHX57Q6P158 1386 aaKnown RBP22.54■■□□□ 1.2
MINDY2-201ENST00000316848 PANK3Q9H999 370 aa22.54■■□□□ 1.2
MINDY2-201ENST00000316848 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.53■■□□□ 1.2
MINDY2-201ENST00000316848 CHMP3Q9Y3E7 222 aa22.53■■□□□ 1.2
MINDY2-201ENST00000316848 PTPRGP23470 1445 aa22.51■■□□□ 1.19
MINDY2-201ENST00000316848 KIAA2012Q0VF49 1180 aa22.51■■□□□ 1.19
MINDY2-201ENST00000316848 CCDC34Q96HJ3 373 aa22.5■■□□□ 1.19
MINDY2-201ENST00000316848 IPO9Q96P70 1041 aaKnown RBP22.49■■□□□ 1.19
MINDY2-201ENST00000316848 TMX4Q9H1E5 349 aaPredicted RBP22.49■■□□□ 1.19
MINDY2-201ENST00000316848 PRKRIP1Q9H875 184 aaPredicted RBP22.48■■□□□ 1.19
MINDY2-201ENST00000316848 CGNL1Q0VF96 1302 aa22.48■■□□□ 1.19
MINDY2-201ENST00000316848 LTV1Q96GA3 475 aaPredicted RBP22.48■■□□□ 1.19
MINDY2-201ENST00000316848 EVC2Q86UK5 1308 aa22.47■■□□□ 1.19
MINDY2-201ENST00000316848 GZF1Q9H116 711 aaPredicted RBP22.47■■□□□ 1.19
MINDY2-201ENST00000316848 NUTM2FA1L443 756 aa22.47■■□□□ 1.19
MINDY2-201ENST00000316848 CCDC9Q9Y3X0 531 aaKnown RBP22.46■■□□□ 1.19
MINDY2-201ENST00000316848 FANCD2Q9BXW9 1451 aa22.45■■□□□ 1.18
MINDY2-201ENST00000316848 CLSTN1O94985 981 aa22.44■■□□□ 1.18
MINDY2-201ENST00000316848 E9PSI1 815 aa22.44■■□□□ 1.18
MINDY2-201ENST00000316848 COG3Q96JB2 828 aa22.44■■□□□ 1.18
MINDY2-201ENST00000316848 CSPP1Q1MSJ5 1256 aa22.44■■□□□ 1.18
MINDY2-201ENST00000316848 RRP7AQ9Y3A4 280 aaKnown RBP22.43■■□□□ 1.18
MINDY2-201ENST00000316848 ST18O60284 1047 aa22.43■■□□□ 1.18
MINDY2-201ENST00000316848 USP47Q96K76 1375 aa22.43■■□□□ 1.18
MINDY2-201ENST00000316848 TSHZ2Q9NRE2 1034 aa22.42■■□□□ 1.18
MINDY2-201ENST00000316848 CENPQQ7L2Z9 268 aaPredicted RBP22.41■■□□□ 1.18
MINDY2-201ENST00000316848 NGEFQ8N5V2 710 aa22.41■■□□□ 1.18
MINDY2-201ENST00000316848 KIF3AQ9Y496 699 aa22.41■■□□□ 1.18
MINDY2-201ENST00000316848 HSP90B1P14625 803 aaKnown RBP22.41■■□□□ 1.18
MINDY2-201ENST00000316848 TPM4P67936 248 aa22.41■■□□□ 1.18
MINDY2-201ENST00000316848 ZKSCAN2Q63HK3 967 aa22.4■■□□□ 1.18
MINDY2-201ENST00000316848 GOLGA6L3A6NEY3 463 aa22.39■■□□□ 1.17
MINDY2-201ENST00000316848 ZBED9Q6R2W3 1325 aa22.38■■□□□ 1.17
MINDY2-201ENST00000316848 RUSC2Q8N2Y8 1516 aa22.38■■□□□ 1.17
MINDY2-201ENST00000316848 SMARCA4P51532 1647 aa22.37■■□□□ 1.17
MINDY2-201ENST00000316848 ELL2O00472 640 aaPredicted RBP22.37■■□□□ 1.17
MINDY2-201ENST00000316848 GTF2E1P29083 439 aaPredicted RBP22.36■■□□□ 1.17
MINDY2-201ENST00000316848 STAC3Q96MF2 364 aa22.36■■□□□ 1.17
MINDY2-201ENST00000316848 KIF16BQ96L93 1317 aa22.36■■□□□ 1.17
MINDY2-201ENST00000316848 MYOM3Q5VTT5 1437 aa22.35■■□□□ 1.17
MINDY2-201ENST00000316848 TEFQ10587 303 aa22.34■■□□□ 1.17
MINDY2-201ENST00000316848 BCL2L13Q9BXK5 485 aa22.34■■□□□ 1.17
MINDY2-201ENST00000316848 C1orf141Q5JVX7 400 aa22.33■■□□□ 1.17
MINDY2-201ENST00000316848 MINK1Q8N4C8 1332 aaPredicted RBP22.33■■□□□ 1.16
MINDY2-201ENST00000316848 RRP1P56182 461 aaKnown RBP22.32■■□□□ 1.16
MINDY2-201ENST00000316848 FAM161AQ3B820 660 aa22.32■■□□□ 1.16
MINDY2-201ENST00000316848 APAF1O14727 1248 aa22.32■■□□□ 1.16
MINDY2-201ENST00000316848 NOL8Q76FK4 1167 aaKnown RBP22.32■■□□□ 1.16
MINDY2-201ENST00000316848 CHMP4CQ96CF2 233 aa22.31■■□□□ 1.16
MINDY2-201ENST00000316848 FRAT2O75474 233 aaPredicted RBP22.31■■□□□ 1.16
MINDY2-201ENST00000316848 ANKRD45Q5TZF3 282 aa22.31■■□□□ 1.16
MINDY2-201ENST00000316848 TOMM22Q9NS69 142 aa22.3■■□□□ 1.16
MINDY2-201ENST00000316848 IGF1RP08069 1367 aa22.3■■□□□ 1.16
MINDY2-201ENST00000316848 PHF14O94880 888 aa22.3■■□□□ 1.16
MINDY2-201ENST00000316848 DIAPH1O60610 1272 aaKnown RBP22.29■■□□□ 1.16
MINDY2-201ENST00000316848 G3V3G9 751 aa22.28■■□□□ 1.16
MINDY2-201ENST00000316848 DCAF8Q5TAQ9 597 aa22.28■■□□□ 1.16
MINDY2-201ENST00000316848 RASSF8Q8NHQ8 419 aa22.28■■□□□ 1.16
MINDY2-201ENST00000316848 FOXD4L1Q9NU39 408 aa22.28■■□□□ 1.16
MINDY2-201ENST00000316848 PDE4AP27815 886 aa22.28■■□□□ 1.16
MINDY2-201ENST00000316848 GAPVD1Q14C86 1478 aa22.27■■□□□ 1.16
MINDY2-201ENST00000316848 PLIN1O60240 522 aa22.27■■□□□ 1.16
MINDY2-201ENST00000316848 COG6Q9Y2V7 657 aa22.27■■□□□ 1.16
MINDY2-201ENST00000316848 NEXNQ0ZGT2 675 aa22.27■■□□□ 1.16
MINDY2-201ENST00000316848 CYB5RLQ6IPT4 315 aa22.27■■□□□ 1.16
MINDY2-201ENST00000316848 EXOC6Q8TAG9 804 aa22.27■■□□□ 1.16
MINDY2-201ENST00000316848 SF3A1Q15459 793 aaKnown RBP22.26■■□□□ 1.15
MINDY2-201ENST00000316848 OSCARQ8IYS5 282 aa22.26■■□□□ 1.15
MINDY2-201ENST00000316848 RILPL2Q969X0 211 aa22.26■■□□□ 1.15
MINDY2-201ENST00000316848 DDX19BQ9UMR2 479 aa22.26■■□□□ 1.15
MINDY2-201ENST00000316848 DDX11L8A8MPP1 907 aa22.26■■□□□ 1.15
MINDY2-201ENST00000316848 API5Q9BZZ5 524 aaKnown RBP22.25■■□□□ 1.15
MINDY2-201ENST00000316848 USP35Q9P2H5 1018 aa22.25■■□□□ 1.15
MINDY2-201ENST00000316848 ATP6V1DQ9Y5K8 247 aa22.24■■□□□ 1.15
MINDY2-201ENST00000316848 CRBNQ96SW2 442 aa22.24■■□□□ 1.15
MINDY2-201ENST00000316848 LRRFIP1Q32MZ4 808 aaKnown RBP22.23■■□□□ 1.15
MINDY2-201ENST00000316848 FGD5Q6ZNL6 1462 aa22.22■■□□□ 1.15
MINDY2-201ENST00000316848 FGD6Q6ZV73 1430 aa22.22■■□□□ 1.15
MINDY2-201ENST00000316848 TTC5Q8N0Z6 440 aa22.22■■□□□ 1.15
MINDY2-201ENST00000316848 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.21■■□□□ 1.15
MINDY2-201ENST00000316848 RUFY2Q8WXA3 655 aa22.2■■□□□ 1.14
MINDY2-201ENST00000316848 C9orf78Q9NZ63 289 aaPredicted RBP22.2■■□□□ 1.14
MINDY2-201ENST00000316848 REC8O95072 547 aa22.2■■□□□ 1.14
MINDY2-201ENST00000316848 RIPK4P57078 832 aa22.2■■□□□ 1.14
MINDY2-201ENST00000316848 DIAPH3Q9NSV4 1193 aa22.2■■□□□ 1.14
MINDY2-201ENST00000316848 DZIP1LQ8IYY4 767 aaKnown RBP22.19■■□□□ 1.14
MINDY2-201ENST00000316848 EVA1CP58658 441 aa22.19■■□□□ 1.14
MINDY2-201ENST00000316848 FAM184AQ8NB25 1140 aa22.18■■□□□ 1.14
MINDY2-201ENST00000316848 H3BQV1 296 aa22.18■■□□□ 1.14
MINDY2-201ENST00000316848 IFFO2Q5TF58 517 aa22.18■■□□□ 1.14
MINDY2-201ENST00000316848 RUNDC1Q96C34 613 aa22.18■■□□□ 1.14
MINDY2-201ENST00000316848 CPLX2Q6PUV4 134 aaKnown RBP22.17■■□□□ 1.14
MINDY2-201ENST00000316848 EIF2S2P20042 333 aaKnown RBP22.16■■□□□ 1.14
MINDY2-201ENST00000316848 DDX49Q9Y6V7 483 aaKnown RBP22.16■■□□□ 1.14
MINDY2-201ENST00000316848 DDX58O95786 925 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms