RNA–Protein interactions for RNA: ENST00000316824.3

ALX1-201, Transcript of ALX homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALX1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALX1-201ENST00000316824 AFAP1Q8N556 730 aa19.34■□□□□ 0.69
ALX1-201ENST00000316824 KDM5DQ9BY66 1539 aa19.33■□□□□ 0.68
ALX1-201ENST00000316824 EIF2AK4Q9P2K8 1649 aaKnown RBP19.33■□□□□ 0.68
ALX1-201ENST00000316824 RNF216Q9NWF9 866 aaPredicted RBP19.33■□□□□ 0.68
ALX1-201ENST00000316824 UNC13BO14795 1591 aa19.32■□□□□ 0.68
ALX1-201ENST00000316824 FRMPD1Q5SYB0 1578 aa19.32■□□□□ 0.68
ALX1-201ENST00000316824 NPM3O75607 178 aaKnown RBP19.31■□□□□ 0.68
ALX1-201ENST00000316824 MAGI2Q86UL8 1455 aa19.27■□□□□ 0.68
ALX1-201ENST00000316824 ABCA6Q8N139 1617 aa19.27■□□□□ 0.68
ALX1-201ENST00000316824 TRIM52Q96A61 297 aa19.26■□□□□ 0.67
ALX1-201ENST00000316824 DEPDC5O75140 1603 aa19.26■□□□□ 0.67
ALX1-201ENST00000316824 HOXD11P31277 338 aaPredicted RBP19.25■□□□□ 0.67
ALX1-201ENST00000316824 DIP2CQ9Y2E4 1556 aa19.24■□□□□ 0.67
ALX1-201ENST00000316824 PZPP20742 1482 aa19.24■□□□□ 0.67
ALX1-201ENST00000316824 DHX29Q7Z478 1369 aaKnown RBP19.24■□□□□ 0.67
ALX1-201ENST00000316824 BCORL1Q5H9F3 1711 aa19.24■□□□□ 0.67
ALX1-201ENST00000316824 MYT1LQ9UL68 1186 aa19.24■□□□□ 0.67
ALX1-201ENST00000316824 IQGAP3Q86VI3 1631 aa19.24■□□□□ 0.67
ALX1-201ENST00000316824 A2MP01023 1474 aa19.23■□□□□ 0.67
ALX1-201ENST00000316824 RAPGEF3O95398 923 aa19.22■□□□□ 0.67
ALX1-201ENST00000316824 RNF17Q9BXT8 1623 aaKnown RBP19.21■□□□□ 0.67
ALX1-201ENST00000316824 PRDM15P57071 1507 aaPredicted RBP19.2■□□□□ 0.66
ALX1-201ENST00000316824 FAM135AQ9P2D6 1515 aa19.2■□□□□ 0.66
ALX1-201ENST00000316824 MPHOSPH9Q99550 1183 aa19.2■□□□□ 0.66
ALX1-201ENST00000316824 NUP155O75694 1391 aa19.2■□□□□ 0.66
ALX1-201ENST00000316824 REREQ9P2R6 1566 aa19.19■□□□□ 0.66
ALX1-201ENST00000316824 ARHGEF40Q8TER5 1519 aa19.19■□□□□ 0.66
ALX1-201ENST00000316824 SLC4A1APQ9BWU0 796 aaKnown RBP19.17■□□□□ 0.66
ALX1-201ENST00000316824 TRHP20396 242 aaPredicted RBP19.16■□□□□ 0.66
ALX1-201ENST00000316824 MROH1Q8NDA8 1641 aa19.14■□□□□ 0.66
ALX1-201ENST00000316824 VWDEQ8N2E2 1590 aa19.14■□□□□ 0.66
ALX1-201ENST00000316824 YEATS2Q9ULM3 1422 aa19.14■□□□□ 0.65
ALX1-201ENST00000316824 COL17A1Q9UMD9 1497 aaPredicted RBP19.13■□□□□ 0.65
ALX1-201ENST00000316824 KANK1Q14678 1352 aa19.13■□□□□ 0.65
ALX1-201ENST00000316824 ATP10AO60312 1499 aa19.13■□□□□ 0.65
ALX1-201ENST00000316824 TET3O43151 1660 aa19.11■□□□□ 0.65
ALX1-201ENST00000316824 AGLP35573 1532 aa19.1■□□□□ 0.65
ALX1-201ENST00000316824 KIF3BO15066 747 aa19.09■□□□□ 0.65
ALX1-201ENST00000316824 LMTK2Q8IWU2 1503 aa19.09■□□□□ 0.65
ALX1-201ENST00000316824 ZC3H13Q5T200 1668 aaKnown RBP19.08■□□□□ 0.65
ALX1-201ENST00000316824 ANKRD30BQ9BXX2 1392 aa19.08■□□□□ 0.65
ALX1-201ENST00000316824 TIMELESSQ9UNS1 1208 aa19.08■□□□□ 0.64
ALX1-201ENST00000316824 PKD2Q13563 968 aa19.07■□□□□ 0.64
ALX1-201ENST00000316824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.06■□□□□ 0.64
ALX1-201ENST00000316824 EFCAB6Q5THR3 1501 aa19.05■□□□□ 0.64
ALX1-201ENST00000316824 RPRD2Q5VT52 1461 aaKnown RBP19.04■□□□□ 0.64
ALX1-201ENST00000316824 E9PCH4 1651 aa19.03■□□□□ 0.64
ALX1-201ENST00000316824 CEP152O94986 1710 aa19.03■□□□□ 0.64
ALX1-201ENST00000316824 ABCC3O15438 1527 aa19.02■□□□□ 0.63
ALX1-201ENST00000316824 TONSLQ96HA7 1378 aa19.01■□□□□ 0.63
ALX1-201ENST00000316824 SIN3AQ96ST3 1273 aa19■□□□□ 0.63
ALX1-201ENST00000316824 SPHKAPQ2M3C7 1700 aa18.99■□□□□ 0.63
ALX1-201ENST00000316824 CAMSAP1Q5T5Y3 1602 aa18.99■□□□□ 0.63
ALX1-201ENST00000316824 TRPM2O94759 1503 aa18.98■□□□□ 0.63
ALX1-201ENST00000316824 NEUROD1Q13562 356 aa18.98■□□□□ 0.63
ALX1-201ENST00000316824 SIGLEC1Q9BZZ2 1709 aa18.96■□□□□ 0.63
ALX1-201ENST00000316824 CCDC144AA2RUR9 1427 aa18.96■□□□□ 0.63
ALX1-201ENST00000316824 GGT6Q6P531 493 aa18.95■□□□□ 0.62
ALX1-201ENST00000316824 PTPRTO14522 1441 aa18.94■□□□□ 0.62
ALX1-201ENST00000316824 PLA2R1Q13018 1463 aa18.93■□□□□ 0.62
ALX1-201ENST00000316824 ARHGAP31Q2M1Z3 1444 aa18.93■□□□□ 0.62
ALX1-201ENST00000316824 WASHC2CQ9Y4E1 1318 aa18.92■□□□□ 0.62
ALX1-201ENST00000316824 NPATQ14207 1427 aa18.9■□□□□ 0.62
ALX1-201ENST00000316824 DCAF8L1A6NGE4 600 aa18.89■□□□□ 0.61
ALX1-201ENST00000316824 NEURL4Q96JN8 1562 aa18.88■□□□□ 0.61
ALX1-201ENST00000316824 CNTLNQ9NXG0 1405 aa18.88■□□□□ 0.61
ALX1-201ENST00000316824 CLTCL1P53675 1640 aa18.86■□□□□ 0.61
ALX1-201ENST00000316824 CLTCQ00610 1675 aaKnown RBP18.86■□□□□ 0.61
ALX1-201ENST00000316824 MROH2AA6NES4 1674 aa18.84■□□□□ 0.61
ALX1-201ENST00000316824 PREX1Q8TCU6 1659 aa18.83■□□□□ 0.61
ALX1-201ENST00000316824 NOS1P29475 1434 aa18.83■□□□□ 0.6
ALX1-201ENST00000316824 PPP1R15AO75807 674 aaPredicted RBP18.83■□□□□ 0.6
ALX1-201ENST00000316824 ARID4BQ4LE39 1312 aaPredicted RBP18.81■□□□□ 0.6
ALX1-201ENST00000316824 KIF1BO60333 1816 aa18.81■□□□□ 0.6
ALX1-201ENST00000316824 L3MBTL2Q969R5 705 aa18.81■□□□□ 0.6
ALX1-201ENST00000316824 PIK3C2BO00750 1634 aa18.81■□□□□ 0.6
ALX1-201ENST00000316824 SPATA31E1Q6ZUB1 1445 aa18.79■□□□□ 0.6
ALX1-201ENST00000316824 SYNMO15061 1565 aa18.79■□□□□ 0.6
ALX1-201ENST00000316824 ESF1Q9H501 851 aaKnown RBP18.78■□□□□ 0.6
ALX1-201ENST00000316824 ERVK-7P63135 1459 aa18.78■□□□□ 0.6
ALX1-201ENST00000316824 SPATA31D1Q6ZQQ2 1576 aa18.77■□□□□ 0.6
ALX1-201ENST00000316824 ADGRB3O60242 1522 aa18.77■□□□□ 0.6
ALX1-201ENST00000316824 FER1L4A9Z1Z3 1794 aa18.77■□□□□ 0.59
ALX1-201ENST00000316824 UGGT1Q9NYU2 1555 aa18.76■□□□□ 0.59
ALX1-201ENST00000316824 UHRF1BP1Q6BDS2 1440 aa18.76■□□□□ 0.59
ALX1-201ENST00000316824 MLECQ14165 292 aa18.75■□□□□ 0.59
ALX1-201ENST00000316824 CFAP65Q6ZU64 1925 aaKnown RBP18.73■□□□□ 0.59
ALX1-201ENST00000316824 STAC3Q96MF2 364 aa18.72■□□□□ 0.59
ALX1-201ENST00000316824 SLC52A1Q9NWF4 448 aa18.72■□□□□ 0.59
ALX1-201ENST00000316824 IFT172Q9UG01 1749 aa18.7■□□□□ 0.58
ALX1-201ENST00000316824 ZMYM3Q14202 1370 aa18.7■□□□□ 0.58
ALX1-201ENST00000316824 MYOM2P54296 1465 aa18.69■□□□□ 0.58
ALX1-201ENST00000316824 RALGAPBQ86X10 1494 aa18.69■□□□□ 0.58
ALX1-201ENST00000316824 PRAG1Q86YV5 1406 aa18.68■□□□□ 0.58
ALX1-201ENST00000316824 DCAF11Q8TEB1 546 aa18.67■□□□□ 0.58
ALX1-201ENST00000316824 MADDQ8WXG6 1647 aa18.67■□□□□ 0.58
ALX1-201ENST00000316824 C3P01024 1663 aa18.66■□□□□ 0.58
ALX1-201ENST00000316824 RGL3Q3MIN7 710 aa18.66■□□□□ 0.58
ALX1-201ENST00000316824 KDM5AP29375 1690 aaKnown RBP18.65■□□□□ 0.58
ALX1-201ENST00000316824 ADAMTSL3P82987 1691 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms