RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 INO80Q9ULG1 1556 aaPredicted RBP20.63■□□□□ 0.89
CHFR-202ENST00000315585 CCDC7Q96M83 1385 aa20.61■□□□□ 0.89
CHFR-202ENST00000315585 ZNF518AQ6AHZ1 1483 aa20.6■□□□□ 0.89
CHFR-202ENST00000315585 MYT1Q01538 1121 aa20.6■□□□□ 0.89
CHFR-202ENST00000315585 RIMBP3CA6NJZ7 1639 aa20.6■□□□□ 0.89
CHFR-202ENST00000315585 RIMBP3BA6NNM3 1639 aa20.6■□□□□ 0.89
CHFR-202ENST00000315585 RIMBP3Q9UFD9 1639 aa20.6■□□□□ 0.89
CHFR-202ENST00000315585 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.59■□□□□ 0.894e-7■□□□□ 9.3
CHFR-202ENST00000315585 NBPF8Q3BBV2 869 aa20.58■□□□□ 0.88
CHFR-202ENST00000315585 MYT1LQ9UL68 1186 aa20.58■□□□□ 0.88
CHFR-202ENST00000315585 CYB5RLQ6IPT4 315 aa20.57■□□□□ 0.88
CHFR-202ENST00000315585 SPATA31E1Q6ZUB1 1445 aa20.57■□□□□ 0.88
CHFR-202ENST00000315585 NEO1Q92859 1461 aa20.57■□□□□ 0.88
CHFR-202ENST00000315585 ARID4BQ4LE39 1312 aaPredicted RBP20.56■□□□□ 0.88
CHFR-202ENST00000315585 FKBP8Q14318 412 aa20.56■□□□□ 0.88
CHFR-202ENST00000315585 EIF2AK4Q9P2K8 1649 aaKnown RBP20.55■□□□□ 0.88
CHFR-202ENST00000315585 CCDC144AA2RUR9 1427 aa20.54■□□□□ 0.88
CHFR-202ENST00000315585 KANK1Q14678 1352 aa20.54■□□□□ 0.88
CHFR-202ENST00000315585 POLR1AO95602 1720 aaPredicted RBP20.53■□□□□ 0.88
CHFR-202ENST00000315585 DHX29Q7Z478 1369 aaKnown RBP20.53■□□□□ 0.88
CHFR-202ENST00000315585 DEPDC5O75140 1603 aa20.52■□□□□ 0.88
CHFR-202ENST00000315585 POGZQ7Z3K3 1410 aa20.52■□□□□ 0.88
CHFR-202ENST00000315585 ATP10AO60312 1499 aa20.52■□□□□ 0.88
CHFR-202ENST00000315585 GLI2P10070 1586 aa20.52■□□□□ 0.88
CHFR-202ENST00000315585 HNRNPUQ00839 825 aaKnown RBP eCLIP20.51■□□□□ 0.87
CHFR-202ENST00000315585 PRKRIP1Q9H875 184 aaPredicted RBP20.51■□□□□ 0.87
CHFR-202ENST00000315585 KDM5CP41229 1560 aa20.5■□□□□ 0.87
CHFR-202ENST00000315585 UHRF1BP1Q6BDS2 1440 aa20.5■□□□□ 0.87
CHFR-202ENST00000315585 KIDINS220Q9ULH0 1771 aa20.49■□□□□ 0.87
CHFR-202ENST00000315585 MLH3Q9UHC1 1453 aa20.49■□□□□ 0.87
CHFR-202ENST00000315585 MAP3K4Q9Y6R4 1608 aa20.48■□□□□ 0.87
CHFR-202ENST00000315585 KIF7Q2M1P5 1343 aa20.48■□□□□ 0.87
CHFR-202ENST00000315585 C11orf95C9JLR9 678 aaPredicted RBP20.46■□□□□ 0.87
CHFR-202ENST00000315585 HECW2Q9P2P5 1572 aa20.46■□□□□ 0.87
CHFR-202ENST00000315585 ROCK2O75116 1388 aaKnown RBP20.45■□□□□ 0.86
CHFR-202ENST00000315585 KIF3BO15066 747 aa20.45■□□□□ 0.86
CHFR-202ENST00000315585 USP47Q96K76 1375 aa20.45■□□□□ 0.86
CHFR-202ENST00000315585 TET3O43151 1660 aa20.44■□□□□ 0.86
CHFR-202ENST00000315585 A2MP01023 1474 aa20.44■□□□□ 0.86
CHFR-202ENST00000315585 PLA2R1Q13018 1463 aa20.44■□□□□ 0.86
CHFR-202ENST00000315585 PRDM15P57071 1507 aaPredicted RBP20.44■□□□□ 0.86
CHFR-202ENST00000315585 VWDEQ8N2E2 1590 aa20.43■□□□□ 0.86
CHFR-202ENST00000315585 ERICH6BQ5W0A0 696 aa20.43■□□□□ 0.86
CHFR-202ENST00000315585 MRS2Q9HD23 443 aa20.42■□□□□ 0.86
CHFR-202ENST00000315585 RALGAPBQ86X10 1494 aa20.42■□□□□ 0.86
CHFR-202ENST00000315585 DCAF11Q8TEB1 546 aa20.41■□□□□ 0.86
CHFR-202ENST00000315585 E9PCH4 1651 aa20.41■□□□□ 0.86
CHFR-202ENST00000315585 ZNF326Q5BKZ1 582 aaKnown RBP20.41■□□□□ 0.86
CHFR-202ENST00000315585 TRPM2O94759 1503 aa20.38■□□□□ 0.85
CHFR-202ENST00000315585 RNF17Q9BXT8 1623 aaKnown RBP20.37■□□□□ 0.85
CHFR-202ENST00000315585 DIP2BQ9P265 1576 aa20.37■□□□□ 0.85
CHFR-202ENST00000315585 BCANQ96GW7 911 aa20.37■□□□□ 0.85
CHFR-202ENST00000315585 TSHZ2Q9NRE2 1034 aa20.37■□□□□ 0.85
CHFR-202ENST00000315585 PTPRTO14522 1441 aa20.37■□□□□ 0.85
CHFR-202ENST00000315585 SPHKAPQ2M3C7 1700 aa20.36■□□□□ 0.85
CHFR-202ENST00000315585 CARD11Q9BXL7 1154 aa20.36■□□□□ 0.85
CHFR-202ENST00000315585 KDM2AQ9Y2K7 1162 aa20.36■□□□□ 0.85
CHFR-202ENST00000315585 MROH1Q8NDA8 1641 aa20.36■□□□□ 0.85
CHFR-202ENST00000315585 BCORL1Q5H9F3 1711 aa20.36■□□□□ 0.85
CHFR-202ENST00000315585 FAM69CQ0P6D2 419 aa20.36■□□□□ 0.85
CHFR-202ENST00000315585 ZBED9Q6R2W3 1325 aa20.35■□□□□ 0.85
CHFR-202ENST00000315585 LMTK2Q8IWU2 1503 aa20.35■□□□□ 0.85
CHFR-202ENST00000315585 STAC3Q96MF2 364 aa20.35■□□□□ 0.85
CHFR-202ENST00000315585 RICTORQ6R327 1708 aa20.33■□□□□ 0.85
CHFR-202ENST00000315585 ABCA6Q8N139 1617 aa20.33■□□□□ 0.84
CHFR-202ENST00000315585 PRAG1Q86YV5 1406 aa20.32■□□□□ 0.84
CHFR-202ENST00000315585 RGL3Q3MIN7 710 aa20.32■□□□□ 0.84
CHFR-202ENST00000315585 FAM9BQ8IZU0 186 aa20.32■□□□□ 0.84
CHFR-202ENST00000315585 KTN1Q86UP2 1357 aaKnown RBP20.32■□□□□ 0.84
CHFR-202ENST00000315585 RAPGEF3O95398 923 aa20.32■□□□□ 0.84
CHFR-202ENST00000315585 FRMPD1Q5SYB0 1578 aa20.31■□□□□ 0.84
CHFR-202ENST00000315585 EFCAB6Q5THR3 1501 aa20.31■□□□□ 0.84
CHFR-202ENST00000315585 CEP152O94986 1710 aa20.3■□□□□ 0.84
CHFR-202ENST00000315585 NEURL4Q96JN8 1562 aa20.29■□□□□ 0.84
CHFR-202ENST00000315585 DIP2CQ9Y2E4 1556 aa20.29■□□□□ 0.84
CHFR-202ENST00000315585 TRPM1Q7Z4N2 1603 aa20.28■□□□□ 0.84
CHFR-202ENST00000315585 CCDC184Q52MB2 194 aa20.27■□□□□ 0.84
CHFR-202ENST00000315585 ZMYM4Q5VZL5 1548 aa20.26■□□□□ 0.83
CHFR-202ENST00000315585 CLTCL1P53675 1640 aa20.26■□□□□ 0.83
CHFR-202ENST00000315585 LAMC1P11047 1609 aa20.25■□□□□ 0.83
CHFR-202ENST00000315585 POLR3GLQ9BT43 218 aa20.25■□□□□ 0.83
CHFR-202ENST00000315585 PPRC1Q5VV67 1664 aaKnown RBP20.24■□□□□ 0.83
CHFR-202ENST00000315585 GPRASP1Q5JY77 1395 aa20.24■□□□□ 0.83
CHFR-202ENST00000315585 GGT6Q6P531 493 aa20.24■□□□□ 0.83
CHFR-202ENST00000315585 RALBP1Q15311 655 aa20.22■□□□□ 0.83
CHFR-202ENST00000315585 WASHC2CQ9Y4E1 1318 aa20.22■□□□□ 0.83
CHFR-202ENST00000315585 ST20-MTHFSA0A0A6YYL1 179 aa20.22■□□□□ 0.83
CHFR-202ENST00000315585 TSPOAP1O95153 1857 aa20.2■□□□□ 0.82
CHFR-202ENST00000315585 ZC3H13Q5T200 1668 aaKnown RBP20.19■□□□□ 0.82
CHFR-202ENST00000315585 ABCC3O15438 1527 aa20.19■□□□□ 0.82
CHFR-202ENST00000315585 KIF1BO60333 1816 aa20.19■□□□□ 0.82
CHFR-202ENST00000315585 PPP4R2Q9NY27 417 aa20.19■□□□□ 0.82
CHFR-202ENST00000315585 TMC1Q8TDI8 760 aa20.18■□□□□ 0.82
CHFR-202ENST00000315585 YEATS2Q9ULM3 1422 aa20.17■□□□□ 0.82
CHFR-202ENST00000315585 NPATQ14207 1427 aa20.16■□□□□ 0.82
CHFR-202ENST00000315585 CAMSAP1Q5T5Y3 1602 aa20.16■□□□□ 0.82
CHFR-202ENST00000315585 MADDQ8WXG6 1647 aa20.16■□□□□ 0.82
CHFR-202ENST00000315585 BRD4O60885 1362 aaPredicted RBP20.15■□□□□ 0.82
CHFR-202ENST00000315585 REREQ9P2R6 1566 aa20.14■□□□□ 0.82
CHFR-202ENST00000315585 MYBBP1AQ9BQG0 1328 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms