RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 NEFMP07197 916 aa15.96■□□□□ 0.14
LDLRAD3-201ENST00000315571 ANKRD30AQ9BXX3 1397 aa15.95■□□□□ 0.14
LDLRAD3-201ENST00000315571 DENND4BO75064 1496 aaPredicted RBP15.94■□□□□ 0.14
LDLRAD3-201ENST00000315571 SHANK2Q9UPX8 1470 aa15.94■□□□□ 0.14
LDLRAD3-201ENST00000315571 ROCK1Q13464 1354 aa15.93■□□□□ 0.14
LDLRAD3-201ENST00000315571 RAPGEF3O95398 923 aa15.92■□□□□ 0.14
LDLRAD3-201ENST00000315571 ZNF518AQ6AHZ1 1483 aa15.92■□□□□ 0.14
LDLRAD3-201ENST00000315571 DDX10Q13206 875 aaKnown RBP15.92■□□□□ 0.14
LDLRAD3-201ENST00000315571 SETD5Q9C0A6 1442 aa15.92■□□□□ 0.14
LDLRAD3-201ENST00000315571 LAS1LQ9Y4W2 734 aaKnown RBP15.92■□□□□ 0.14
LDLRAD3-201ENST00000315571 POGZQ7Z3K3 1410 aa15.92■□□□□ 0.14
LDLRAD3-201ENST00000315571 DAXXQ9UER7 740 aaPredicted RBP15.91■□□□□ 0.14
LDLRAD3-201ENST00000315571 HFM1A2PYH4 1435 aa15.9■□□□□ 0.14
LDLRAD3-201ENST00000315571 CROCC2H7BZ55 1655 aa15.9■□□□□ 0.14
LDLRAD3-201ENST00000315571 PAK3O75914 559 aaPredicted RBP15.9■□□□□ 0.14
LDLRAD3-201ENST00000315571 PPRC1Q5VV67 1664 aaKnown RBP15.9■□□□□ 0.14
LDLRAD3-201ENST00000315571 NCOA1Q15788 1441 aa15.9■□□□□ 0.14
LDLRAD3-201ENST00000315571 KIF15Q9NS87 1388 aa15.89■□□□□ 0.13
LDLRAD3-201ENST00000315571 NAIPQ13075 1403 aa15.89■□□□□ 0.13
LDLRAD3-201ENST00000315571 ADGRL2O95490 1459 aa15.89■□□□□ 0.13
LDLRAD3-201ENST00000315571 RAB3GAP2Q9H2M9 1393 aa15.88■□□□□ 0.13
LDLRAD3-201ENST00000315571 RTEL1-TNFRSF6BF6WH68 1400 aa15.86■□□□□ 0.13
LDLRAD3-201ENST00000315571 MAST1Q9Y2H9 1570 aa15.86■□□□□ 0.13
LDLRAD3-201ENST00000315571 ADGBQ8N7X0 1667 aa15.86■□□□□ 0.13
LDLRAD3-201ENST00000315571 ATP7AQ04656 1500 aa15.84■□□□□ 0.13
LDLRAD3-201ENST00000315571 ZMYND15Q9H091 742 aa15.84■□□□□ 0.13
LDLRAD3-201ENST00000315571 ANP32CO43423 234 aa15.84■□□□□ 0.13
LDLRAD3-201ENST00000315571 ZFYVE16Q7Z3T8 1539 aa15.83■□□□□ 0.13
LDLRAD3-201ENST00000315571 ANKRD50Q9ULJ7 1429 aa15.83■□□□□ 0.12
LDLRAD3-201ENST00000315571 B4GALNT3Q6L9W6 998 aa15.83■□□□□ 0.12
LDLRAD3-201ENST00000315571 HNRNPUQ00839 825 aaKnown RBP eCLIP15.83■□□□□ 0.12
LDLRAD3-201ENST00000315571 BRPF3Q9ULD4 1205 aa15.82■□□□□ 0.12
LDLRAD3-201ENST00000315571 KDM5CP41229 1560 aa15.82■□□□□ 0.12
LDLRAD3-201ENST00000315571 MLH3Q9UHC1 1453 aa15.82■□□□□ 0.12
LDLRAD3-201ENST00000315571 HECW2Q9P2P5 1572 aa15.81■□□□□ 0.12
LDLRAD3-201ENST00000315571 GCC2Q8IWJ2 1684 aa15.8■□□□□ 0.12
LDLRAD3-201ENST00000315571 PLXNC1O60486 1568 aa15.8■□□□□ 0.12
LDLRAD3-201ENST00000315571 INO80Q9ULG1 1556 aaPredicted RBP15.8■□□□□ 0.12
LDLRAD3-201ENST00000315571 COL17A1Q9UMD9 1497 aaPredicted RBP15.8■□□□□ 0.12
LDLRAD3-201ENST00000315571 RICTORQ6R327 1708 aa15.79■□□□□ 0.12
LDLRAD3-201ENST00000315571 DUOX2Q9NRD8 1548 aa15.79■□□□□ 0.12
LDLRAD3-201ENST00000315571 RSPH6AQ9H0K4 717 aa15.78■□□□□ 0.12
LDLRAD3-201ENST00000315571 FRMPD1Q5SYB0 1578 aa15.78■□□□□ 0.12
LDLRAD3-201ENST00000315571 MAGI2Q86UL8 1455 aa15.76■□□□□ 0.11
LDLRAD3-201ENST00000315571 KIDINS220Q9ULH0 1771 aa15.76■□□□□ 0.11
LDLRAD3-201ENST00000315571 YEATS2Q9ULM3 1422 aa15.76■□□□□ 0.11
LDLRAD3-201ENST00000315571 ZMYM4Q5VZL5 1548 aa15.76■□□□□ 0.11
LDLRAD3-201ENST00000315571 ERBINQ96RT1 1412 aa15.76■□□□□ 0.11
LDLRAD3-201ENST00000315571 DHX29Q7Z478 1369 aaKnown RBP15.76■□□□□ 0.11
LDLRAD3-201ENST00000315571 KDM6BO15054 1643 aa15.75■□□□□ 0.11
LDLRAD3-201ENST00000315571 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.75■□□□□ 0.11
LDLRAD3-201ENST00000315571 A2MP01023 1474 aa15.75■□□□□ 0.11
LDLRAD3-201ENST00000315571 KIF3BO15066 747 aa15.75■□□□□ 0.11
LDLRAD3-201ENST00000315571 PPP4R2Q9NY27 417 aa15.73■□□□□ 0.11
LDLRAD3-201ENST00000315571 NAP1L5Q96NT1 182 aaPredicted RBP15.73■□□□□ 0.11
LDLRAD3-201ENST00000315571 IPO9Q96P70 1041 aaKnown RBP15.73■□□□□ 0.11
LDLRAD3-201ENST00000315571 NUP155O75694 1391 aa15.72■□□□□ 0.11
LDLRAD3-201ENST00000315571 ABCA6Q8N139 1617 aa15.72■□□□□ 0.11
LDLRAD3-201ENST00000315571 DIP2CQ9Y2E4 1556 aa15.71■□□□□ 0.11
LDLRAD3-201ENST00000315571 ATP10AO60312 1499 aa15.7■□□□□ 0.1
LDLRAD3-201ENST00000315571 DHX57Q6P158 1386 aaKnown RBP15.7■□□□□ 0.1
LDLRAD3-201ENST00000315571 SLC4A1APQ9BWU0 796 aaKnown RBP15.7■□□□□ 0.1
LDLRAD3-201ENST00000315571 HIRIP3Q9BW71 556 aaPredicted RBP15.69■□□□□ 0.1
LDLRAD3-201ENST00000315571 GGT6Q6P531 493 aa15.69■□□□□ 0.1
LDLRAD3-201ENST00000315571 HSP90AA2PQ14568 343 aaPredicted RBP15.68■□□□□ 0.1
LDLRAD3-201ENST00000315571 MPHOSPH9Q99550 1183 aa15.68■□□□□ 0.1
LDLRAD3-201ENST00000315571 KANK1Q14678 1352 aa15.67■□□□□ 0.1
LDLRAD3-201ENST00000315571 ARHGEF40Q8TER5 1519 aa15.67■□□□□ 0.1
LDLRAD3-201ENST00000315571 ARID4BQ4LE39 1312 aaPredicted RBP15.67■□□□□ 0.1
LDLRAD3-201ENST00000315571 ARXQ96QS3 562 aa15.67■□□□□ 0.1
LDLRAD3-201ENST00000315571 EIF2AK4Q9P2K8 1649 aaKnown RBP15.64■□□□□ 0.09
LDLRAD3-201ENST00000315571 MLECQ14165 292 aa15.63■□□□□ 0.09
LDLRAD3-201ENST00000315571 PPM1GO15355 546 aaPredicted RBP15.62■□□□□ 0.09
LDLRAD3-201ENST00000315571 PKD2Q13563 968 aa15.62■□□□□ 0.09
LDLRAD3-201ENST00000315571 UNC13BO14795 1591 aa15.62■□□□□ 0.09
LDLRAD3-201ENST00000315571 PZPP20742 1482 aa15.62■□□□□ 0.09
LDLRAD3-201ENST00000315571 FOXD1Q16676 465 aa15.61■□□□□ 0.09
LDLRAD3-201ENST00000315571 WASHC2CQ9Y4E1 1318 aa15.6■□□□□ 0.09
LDLRAD3-201ENST00000315571 FAM135AQ9P2D6 1515 aa15.6■□□□□ 0.09
LDLRAD3-201ENST00000315571 REREQ9P2R6 1566 aa15.6■□□□□ 0.09
LDLRAD3-201ENST00000315571 KDM5DQ9BY66 1539 aa15.6■□□□□ 0.09
LDLRAD3-201ENST00000315571 HSP90AA1P07900 732 aaKnown RBP15.6■□□□□ 0.09
LDLRAD3-201ENST00000315571 CNGB1Q14028 1251 aaPredicted RBP15.59■□□□□ 0.09
LDLRAD3-201ENST00000315571 ESF1Q9H501 851 aaKnown RBP15.59■□□□□ 0.09
LDLRAD3-201ENST00000315571 AGLP35573 1532 aa15.58■□□□□ 0.09
LDLRAD3-201ENST00000315571 GSE1Q14687 1217 aa15.58■□□□□ 0.08
LDLRAD3-201ENST00000315571 PRDM15P57071 1507 aaPredicted RBP15.57■□□□□ 0.08
LDLRAD3-201ENST00000315571 PDE4CQ08493 712 aa15.57■□□□□ 0.08
LDLRAD3-201ENST00000315571 DEPDC5O75140 1603 aa15.57■□□□□ 0.08
LDLRAD3-201ENST00000315571 RNF17Q9BXT8 1623 aaKnown RBP15.57■□□□□ 0.08
LDLRAD3-201ENST00000315571 IQGAP3Q86VI3 1631 aa15.56■□□□□ 0.08
LDLRAD3-201ENST00000315571 BCORL1Q5H9F3 1711 aa15.54■□□□□ 0.08
LDLRAD3-201ENST00000315571 MROH1Q8NDA8 1641 aa15.54■□□□□ 0.08
LDLRAD3-201ENST00000315571 USP35Q9P2H5 1018 aa15.54■□□□□ 0.08
LDLRAD3-201ENST00000315571 PPP6R1Q9UPN7 881 aa15.54■□□□□ 0.08
LDLRAD3-201ENST00000315571 SIN3AQ96ST3 1273 aa15.53■□□□□ 0.08
LDLRAD3-201ENST00000315571 VWDEQ8N2E2 1590 aa15.52■□□□□ 0.07
LDLRAD3-201ENST00000315571 ABCC3O15438 1527 aa15.51■□□□□ 0.07
LDLRAD3-201ENST00000315571 ANKRD30BQ9BXX2 1392 aa15.5■□□□□ 0.07
LDLRAD3-201ENST00000315571 FAM9BQ8IZU0 186 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms