RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 ATP7AQ04656 1500 aa12.07□□□□□ -0.48
CDC42-201ENST00000315554 ARHGEF5Q12774 1597 aa12.06□□□□□ -0.48
CDC42-201ENST00000315554 ATP10AO60312 1499 aa12.06□□□□□ -0.48
CDC42-201ENST00000315554 TSPY4P0CV99 314 aa12.06□□□□□ -0.48
CDC42-201ENST00000315554 TSPY10P0CW01 314 aa12.06□□□□□ -0.48
CDC42-201ENST00000315554 ABCC5O15440 1437 aa12.06□□□□□ -0.48
CDC42-201ENST00000315554 INO80Q9ULG1 1556 aaPredicted RBP12.06□□□□□ -0.48
CDC42-201ENST00000315554 SIGLEC1Q9BZZ2 1709 aa12.06□□□□□ -0.48
CDC42-201ENST00000315554 ITGAEP38570 1179 aa12.05□□□□□ -0.48
CDC42-201ENST00000315554 MLECQ14165 292 aa12.05□□□□□ -0.48
CDC42-201ENST00000315554 CHIC2Q9UKJ5 165 aa12.05□□□□□ -0.48
CDC42-201ENST00000315554 DAPK1P53355 1430 aa12.04□□□□□ -0.48
CDC42-201ENST00000315554 C9orf84Q5VXU9 1444 aa12.04□□□□□ -0.48
CDC42-201ENST00000315554 RSPH4AQ5TD94 716 aa12.04□□□□□ -0.48
CDC42-201ENST00000315554 DNMT1P26358 1616 aaKnown RBP12.03□□□□□ -0.48
CDC42-201ENST00000315554 KDM4FA0A1W2PPD8 638 aa12.02□□□□□ -0.49
CDC42-201ENST00000315554 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.49
CDC42-201ENST00000315554 RTEL1-TNFRSF6BF6WH68 1400 aa12.01□□□□□ -0.49
CDC42-201ENST00000315554 CROCC2H7BZ55 1655 aa12.01□□□□□ -0.49
CDC42-201ENST00000315554 PTPRKQ15262 1439 aa12□□□□□ -0.49
CDC42-201ENST00000315554 RRBP1Q9P2E9 1410 aaKnown RBP12□□□□□ -0.49
CDC42-201ENST00000315554 A2MP01023 1474 aa12□□□□□ -0.49
CDC42-201ENST00000315554 RRP7BPQ9NSQ0 103 aa12□□□□□ -0.49
CDC42-201ENST00000315554 MAST1Q9Y2H9 1570 aa11.99□□□□□ -0.49
CDC42-201ENST00000315554 ADGBQ8N7X0 1667 aa11.99□□□□□ -0.49
CDC42-201ENST00000315554 SHANK2Q9UPX8 1470 aa11.99□□□□□ -0.49
CDC42-201ENST00000315554 BCORL1Q5H9F3 1711 aa11.97□□□□□ -0.49
CDC42-201ENST00000315554 REREQ9P2R6 1566 aa11.97□□□□□ -0.49
CDC42-201ENST00000315554 DHX29Q7Z478 1369 aaKnown RBP11.97□□□□□ -0.49
CDC42-201ENST00000315554 KIF15Q9NS87 1388 aa11.97□□□□□ -0.49
CDC42-201ENST00000315554 PLXNC1O60486 1568 aa11.96□□□□□ -0.5
CDC42-201ENST00000315554 KIF3BO15066 747 aa11.95□□□□□ -0.5
CDC42-201ENST00000315554 GGT6Q6P531 493 aa11.95□□□□□ -0.5
CDC42-201ENST00000315554 ANKRD30AQ9BXX3 1397 aa11.95□□□□□ -0.5
CDC42-201ENST00000315554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.95□□□□□ -0.58e-13■■□□□ 13.2
CDC42-201ENST00000315554 MADDQ8WXG6 1647 aa11.95□□□□□ -0.5
CDC42-201ENST00000315554 AGLP35573 1532 aa11.95□□□□□ -0.5
CDC42-201ENST00000315554 LHX8Q68G74 356 aa11.95□□□□□ -0.5
CDC42-201ENST00000315554 ADAMTSL3P82987 1691 aa11.94□□□□□ -0.5
CDC42-201ENST00000315554 NCOA1Q15788 1441 aa11.94□□□□□ -0.5
CDC42-201ENST00000315554 ADGRL2O95490 1459 aa11.93□□□□□ -0.5
CDC42-201ENST00000315554 DUOX2Q9NRD8 1548 aa11.92□□□□□ -0.5
CDC42-201ENST00000315554 RIMS1Q86UR5 1692 aaKnown RBP11.92□□□□□ -0.5
CDC42-201ENST00000315554 C19orf67A6NJJ6 358 aa11.92□□□□□ -0.5
CDC42-201ENST00000315554 FER1L4A9Z1Z3 1794 aa11.9□□□□□ -0.5
CDC42-201ENST00000315554 ESF1Q9H501 851 aaKnown RBP11.9□□□□□ -0.5
CDC42-201ENST00000315554 CEBPAP49715 358 aaPredicted RBP11.89□□□□□ -0.51
CDC42-201ENST00000315554 PTPRMP28827 1452 aa11.89□□□□□ -0.51
CDC42-201ENST00000315554 ROCK1Q13464 1354 aa11.89□□□□□ -0.51
CDC42-201ENST00000315554 ERBINQ96RT1 1412 aa11.88□□□□□ -0.51
CDC42-201ENST00000315554 ANKRD50Q9ULJ7 1429 aa11.88□□□□□ -0.51
CDC42-201ENST00000315554 EIF2AK4Q9P2K8 1649 aaKnown RBP11.87□□□□□ -0.51
CDC42-201ENST00000315554 PRKAR2AP13861 404 aaKnown RBP11.87□□□□□ -0.51
CDC42-201ENST00000315554 CLTCQ00610 1675 aaKnown RBP11.86□□□□□ -0.51
CDC42-201ENST00000315554 GABBR2O75899 941 aa11.86□□□□□ -0.51
CDC42-201ENST00000315554 MROH1Q8NDA8 1641 aa11.86□□□□□ -0.51
CDC42-201ENST00000315554 WASHC2CQ9Y4E1 1318 aa11.85□□□□□ -0.51
CDC42-201ENST00000315554 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
CDC42-201ENST00000315554 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
CDC42-201ENST00000315554 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
CDC42-201ENST00000315554 RNF17Q9BXT8 1623 aaKnown RBP11.85□□□□□ -0.51
CDC42-201ENST00000315554 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
CDC42-201ENST00000315554 NAIPQ13075 1403 aa11.83□□□□□ -0.52
CDC42-201ENST00000315554 ZMYM3Q14202 1370 aa11.83□□□□□ -0.52
CDC42-201ENST00000315554 KDM5DQ9BY66 1539 aa11.83□□□□□ -0.52
CDC42-201ENST00000315554 CNTLNQ9NXG0 1405 aa11.83□□□□□ -0.52
CDC42-201ENST00000315554 ABCC3O15438 1527 aa11.82□□□□□ -0.52
CDC42-201ENST00000315554 C3P01024 1663 aa11.82□□□□□ -0.52
CDC42-201ENST00000315554 PRDM15P57071 1507 aaPredicted RBP11.82□□□□□ -0.52
CDC42-201ENST00000315554 CEP152O94986 1710 aa11.81□□□□□ -0.52
CDC42-201ENST00000315554 HFM1A2PYH4 1435 aa11.81□□□□□ -0.52
CDC42-201ENST00000315554 DEPDC5O75140 1603 aa11.81□□□□□ -0.52
CDC42-201ENST00000315554 KANK1Q14678 1352 aa11.81□□□□□ -0.52
CDC42-201ENST00000315554 GCC2Q8IWJ2 1684 aa11.8□□□□□ -0.52
CDC42-201ENST00000315554 FBXO31Q5XUX0 539 aaPredicted RBP11.8□□□□□ -0.52
CDC42-201ENST00000315554 MROH2AA6NES4 1674 aa11.79□□□□□ -0.52
CDC42-201ENST00000315554 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
CDC42-201ENST00000315554 UNC13BO14795 1591 aa11.78□□□□□ -0.52
CDC42-201ENST00000315554 NUP155O75694 1391 aa11.78□□□□□ -0.52
CDC42-201ENST00000315554 TRIM52Q96A61 297 aa11.78□□□□□ -0.52
CDC42-201ENST00000315554 CAMSAP1Q5T5Y3 1602 aa11.77□□□□□ -0.52
CDC42-201ENST00000315554 VWDEQ8N2E2 1590 aa11.77□□□□□ -0.53
CDC42-201ENST00000315554 FAM135AQ9P2D6 1515 aa11.77□□□□□ -0.53
CDC42-201ENST00000315554 ZC3H13Q5T200 1668 aaKnown RBP11.76□□□□□ -0.53
CDC42-201ENST00000315554 SETD5Q9C0A6 1442 aa11.76□□□□□ -0.53
CDC42-201ENST00000315554 PZPP20742 1482 aa11.75□□□□□ -0.53
CDC42-201ENST00000315554 LMTK2Q8IWU2 1503 aa11.74□□□□□ -0.53
CDC42-201ENST00000315554 NPATQ14207 1427 aa11.74□□□□□ -0.53
CDC42-201ENST00000315554 HSPA2P54652 639 aa11.74□□□□□ -0.53
CDC42-201ENST00000315554 TNRQ92752 1358 aa11.73□□□□□ -0.53
CDC42-201ENST00000315554 RAB3GAP2Q9H2M9 1393 aa11.73□□□□□ -0.53
CDC42-201ENST00000315554 EFCAB6Q5THR3 1501 aa11.73□□□□□ -0.53
CDC42-201ENST00000315554 IQGAP3Q86VI3 1631 aa11.73□□□□□ -0.53
CDC42-201ENST00000315554 CFAP65Q6ZU64 1925 aaKnown RBP11.73□□□□□ -0.53
CDC42-201ENST00000315554 ERVK-7P63135 1459 aa11.72□□□□□ -0.53
CDC42-201ENST00000315554 TRIM26Q12899 539 aaPredicted RBP11.72□□□□□ -0.53
CDC42-201ENST00000315554 UHRF1BP1Q6BDS2 1440 aa11.72□□□□□ -0.53
CDC42-201ENST00000315554 LMTK3Q96Q04 1460 aa11.72□□□□□ -0.53
CDC42-201ENST00000315554 TET3O43151 1660 aa11.71□□□□□ -0.53
CDC42-201ENST00000315554 ARHGAP31Q2M1Z3 1444 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms