RNA–Protein interactions for RNA: ENST00000315480.8

USP20-201, Transcript of ubiquitin specific peptidase 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP20, Length 4,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP20-201ENST00000315480 RCAN3Q9UKA8 241 aa16.43■□□□□ 0.22
USP20-201ENST00000315480 PRKCSHP14314 528 aaPredicted RBP16.43■□□□□ 0.22
USP20-201ENST00000315480 PDE3BQ13370 1112 aa16.43■□□□□ 0.22
USP20-201ENST00000315480 TAOK2Q9UL54 1235 aa16.43■□□□□ 0.22
USP20-201ENST00000315480 TEFQ10587 303 aa16.43■□□□□ 0.22
USP20-201ENST00000315480 ITPRIPQ8IWB1 547 aa16.43■□□□□ 0.22
USP20-201ENST00000315480 G3V3G9 751 aa16.43■□□□□ 0.22
USP20-201ENST00000315480 DCAF8Q5TAQ9 597 aa16.43■□□□□ 0.22
USP20-201ENST00000315480 CHMP3Q9Y3E7 222 aa16.43■□□□□ 0.22
USP20-201ENST00000315480 APBB1O00213 710 aa16.42■□□□□ 0.22
USP20-201ENST00000315480 GOLGA6L4A6NEF3 574 aa16.41■□□□□ 0.22
USP20-201ENST00000315480 DHX57Q6P158 1386 aaKnown RBP16.41■□□□□ 0.22
USP20-201ENST00000315480 TRIM44Q96DX7 344 aaPredicted RBP16.41■□□□□ 0.22
USP20-201ENST00000315480 PANK3Q9H999 370 aa16.41■□□□□ 0.22
USP20-201ENST00000315480 TULP1O00294 542 aaPredicted RBP16.41■□□□□ 0.22
USP20-201ENST00000315480 AFAP1Q8N556 730 aa16.41■□□□□ 0.22
USP20-201ENST00000315480 GPATCH3Q96I76 525 aa16.41■□□□□ 0.22
USP20-201ENST00000315480 RBM19Q9Y4C8 960 aaKnown RBP16.41■□□□□ 0.22
USP20-201ENST00000315480 B4GALNT3Q6L9W6 998 aa16.39■□□□□ 0.21
USP20-201ENST00000315480 ZNF644Q9H582 1327 aaPredicted RBP16.38■□□□□ 0.21
USP20-201ENST00000315480 SLC4A10Q6U841 1118 aa16.38■□□□□ 0.21
USP20-201ENST00000315480 HSCBQ8IWL3 235 aa16.38■□□□□ 0.21
USP20-201ENST00000315480 CENPJQ9HC77 1338 aaPredicted RBP16.38■□□□□ 0.21
USP20-201ENST00000315480 ERICH6BQ5W0A0 696 aa16.37■□□□□ 0.21
USP20-201ENST00000315480 CUX1P39880 1505 aa16.37■□□□□ 0.21
USP20-201ENST00000315480 FGD6Q6ZV73 1430 aa16.37■□□□□ 0.21
USP20-201ENST00000315480 ANKRD50Q9ULJ7 1429 aa16.37■□□□□ 0.21
USP20-201ENST00000315480 MEX3CQ5U5Q3 659 aaKnown RBP16.37■□□□□ 0.21
USP20-201ENST00000315480 NESP48681 1621 aa16.37■□□□□ 0.21
USP20-201ENST00000315480 PTMAP06454 111 aaKnown RBP16.37■□□□□ 0.21
USP20-201ENST00000315480 CC2D2AQ9P2K1 1620 aa16.36■□□□□ 0.21
USP20-201ENST00000315480 TTC5Q8N0Z6 440 aa16.36■□□□□ 0.21
USP20-201ENST00000315480 THEMISQ8N1K5 641 aaPredicted RBP16.36■□□□□ 0.21
USP20-201ENST00000315480 PMFBP1Q8TBY8 1022 aa16.36■□□□□ 0.21
USP20-201ENST00000315480 HMGXB3Q12766 1538 aa16.35■□□□□ 0.21
USP20-201ENST00000315480 MYBBP1AQ9BQG0 1328 aaKnown RBP16.35■□□□□ 0.21
USP20-201ENST00000315480 CASKIN1Q8WXD9 1431 aa16.35■□□□□ 0.21
USP20-201ENST00000315480 FRAT2O75474 233 aaPredicted RBP16.34■□□□□ 0.21
USP20-201ENST00000315480 NRDCO43847 1150 aa16.34■□□□□ 0.21
USP20-201ENST00000315480 TPRNQ4KMQ1 711 aa16.34■□□□□ 0.21
USP20-201ENST00000315480 TXNDC2Q86VQ3 553 aa16.34■□□□□ 0.21
USP20-201ENST00000315480 CCDC146Q8IYE0 955 aa16.33■□□□□ 0.21
USP20-201ENST00000315480 USP47Q96K76 1375 aa16.33■□□□□ 0.21
USP20-201ENST00000315480 NGEFQ8N5V2 710 aa16.33■□□□□ 0.2
USP20-201ENST00000315480 DEKP35659 375 aaKnown RBP16.33■□□□□ 0.2
USP20-201ENST00000315480 GNL2Q13823 731 aaKnown RBP16.32■□□□□ 0.2
USP20-201ENST00000315480 ARHGAP5Q13017 1502 aa16.32■□□□□ 0.2
USP20-201ENST00000315480 FYCO1Q9BQS8 1478 aa16.31■□□□□ 0.2
USP20-201ENST00000315480 TOPBP1Q92547 1522 aa16.31■□□□□ 0.2
USP20-201ENST00000315480 NEXNQ0ZGT2 675 aa16.31■□□□□ 0.2
USP20-201ENST00000315480 RAPGEF4Q8WZA2 1011 aa16.31■□□□□ 0.2
USP20-201ENST00000315480 DIAPH1O60610 1272 aaKnown RBP16.31■□□□□ 0.2
USP20-201ENST00000315480 PLEKHH2Q8IVE3 1493 aa16.31■□□□□ 0.2
USP20-201ENST00000315480 PRDM2Q13029 1718 aa16.3■□□□□ 0.2
USP20-201ENST00000315480 MSH5O43196 834 aa16.3■□□□□ 0.2
USP20-201ENST00000315480 PROSER2Q86WR7 435 aaPredicted RBP16.3■□□□□ 0.2
USP20-201ENST00000315480 GOLGA6L6A8MZA4 724 aa16.29■□□□□ 0.2
USP20-201ENST00000315480 SLC52A1Q9NWF4 448 aa16.29■□□□□ 0.2
USP20-201ENST00000315480 CLUAP1Q96AJ1 413 aa16.29■□□□□ 0.2
USP20-201ENST00000315480 POGZQ7Z3K3 1410 aa16.28■□□□□ 0.2
USP20-201ENST00000315480 MIA2Q96PC5 1412 aa16.28■□□□□ 0.2
USP20-201ENST00000315480 RTN4Q9NQC3 1192 aaKnown RBP16.27■□□□□ 0.19
USP20-201ENST00000315480 GPRASP1Q5JY77 1395 aa16.26■□□□□ 0.19
USP20-201ENST00000315480 POLA1P09884 1462 aaPredicted RBP16.26■□□□□ 0.19
USP20-201ENST00000315480 NCOA2Q15596 1464 aa16.26■□□□□ 0.19
USP20-201ENST00000315480 LRRC9Q6ZRR7 1453 aa16.25■□□□□ 0.19
USP20-201ENST00000315480 TRIM6-TRIM34B2RNG4 842 aa16.25■□□□□ 0.19
USP20-201ENST00000315480 SYTL4Q96C24 671 aaPredicted RBP16.25■□□□□ 0.19
USP20-201ENST00000315480 PLCB2Q00722 1185 aa16.25■□□□□ 0.19
USP20-201ENST00000315480 NLRP6P59044 892 aa16.25■□□□□ 0.19
USP20-201ENST00000315480 RRP7AQ9Y3A4 280 aaKnown RBP16.25■□□□□ 0.19
USP20-201ENST00000315480 DDX58O95786 925 aaKnown RBP16.24■□□□□ 0.19
USP20-201ENST00000315480 E9PSI1 815 aa16.24■□□□□ 0.19
USP20-201ENST00000315480 HTATSF1O43719 755 aaKnown RBP16.24■□□□□ 0.19
USP20-201ENST00000315480 SNAPC4Q5SXM2 1469 aa16.24■□□□□ 0.19
USP20-201ENST00000315480 ELL2O00472 640 aaPredicted RBP16.24■□□□□ 0.19
USP20-201ENST00000315480 NLRP2Q9NX02 1062 aa16.23■□□□□ 0.19
USP20-201ENST00000315480 NOP58Q9Y2X3 529 aaKnown RBP16.23■□□□□ 0.19
USP20-201ENST00000315480 ERICH3Q5RHP9 1530 aa16.23■□□□□ 0.19
USP20-201ENST00000315480 SCAPERQ9BY12 1400 aa16.23■□□□□ 0.19
USP20-201ENST00000315480 TROQ12816 1431 aaPredicted RBP16.23■□□□□ 0.19
USP20-201ENST00000315480 RRBP1Q9P2E9 1410 aaKnown RBP16.23■□□□□ 0.19
USP20-201ENST00000315480 ANKLE2Q86XL3 938 aa16.22■□□□□ 0.19
USP20-201ENST00000315480 CCDC34Q96HJ3 373 aa16.22■□□□□ 0.19
USP20-201ENST00000315480 LRRFIP1Q32MZ4 808 aaKnown RBP16.22■□□□□ 0.19
USP20-201ENST00000315480 PRKRIP1Q9H875 184 aaPredicted RBP16.22■□□□□ 0.19
USP20-201ENST00000315480 HFM1A2PYH4 1435 aa16.21■□□□□ 0.18
USP20-201ENST00000315480 TCERG1O14776 1098 aaKnown RBP16.2■□□□□ 0.18
USP20-201ENST00000315480 TMEM132EQ6IEE7 984 aa16.2■□□□□ 0.18
USP20-201ENST00000315480 EFCAB5A4FU69 1503 aa16.2■□□□□ 0.18
USP20-201ENST00000315480 RAPGEF3O95398 923 aa16.19■□□□□ 0.18
USP20-201ENST00000315480 ZKSCAN2Q63HK3 967 aa16.19■□□□□ 0.18
USP20-201ENST00000315480 C9orf78Q9NZ63 289 aaPredicted RBP16.19■□□□□ 0.18
USP20-201ENST00000315480 EIF2S2P20042 333 aaKnown RBP16.19■□□□□ 0.18
USP20-201ENST00000315480 KIF21BO75037 1637 aa16.19■□□□□ 0.18
USP20-201ENST00000315480 CLSTN1O94985 981 aa16.18■□□□□ 0.18
USP20-201ENST00000315480 DNTTIP2Q5QJE6 756 aaKnown RBP16.18■□□□□ 0.18
USP20-201ENST00000315480 KIAA0586Q9BVV6 1533 aa16.18■□□□□ 0.18
USP20-201ENST00000315480 TOMM22Q9NS69 142 aa16.18■□□□□ 0.18
USP20-201ENST00000315480 APAF1O14727 1248 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms