RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 PANK3Q9H999 370 aa15.01□□□□□ -0.01
AMBRA1-201ENST00000314845 CGNL1Q0VF96 1302 aa15.01□□□□□ -0.01
AMBRA1-201ENST00000314845 SLC4A10Q6U841 1118 aa15.01□□□□□ -0.01
AMBRA1-201ENST00000314845 COG3Q96JB2 828 aa15□□□□□ -0.01
AMBRA1-201ENST00000314845 CLUAP1Q96AJ1 413 aa15□□□□□ -0.01
AMBRA1-201ENST00000314845 HTATSF1O43719 755 aaKnown RBP15□□□□□ -0.01
AMBRA1-201ENST00000314845 GBP4Q96PP9 640 aa15□□□□□ -0.01
AMBRA1-201ENST00000314845 IGF1RP08069 1367 aa14.99□□□□□ -0.01
AMBRA1-201ENST00000314845 PTMSP20962 102 aa14.99□□□□□ -0.01
AMBRA1-201ENST00000314845 L1TD1Q5T7N2 865 aaKnown RBP14.99□□□□□ -0.01
AMBRA1-201ENST00000314845 SPRYD3Q8NCJ5 442 aa14.99□□□□□ -0.01
AMBRA1-201ENST00000314845 DHX57Q6P158 1386 aaKnown RBP14.98□□□□□ -0.01
AMBRA1-201ENST00000314845 MYOM3Q5VTT5 1437 aa14.98□□□□□ -0.01
AMBRA1-201ENST00000314845 RUSC2Q8N2Y8 1516 aa14.98□□□□□ -0.01
AMBRA1-201ENST00000314845 STAC3Q96MF2 364 aa14.97□□□□□ -0.01
AMBRA1-201ENST00000314845 FGD5Q6ZNL6 1462 aa14.97□□□□□ -0.01
AMBRA1-201ENST00000314845 TRIM6-TRIM34B2RNG4 842 aa14.96□□□□□ -0.01
AMBRA1-201ENST00000314845 GTF2E1P29083 439 aaPredicted RBP14.95□□□□□ -0.02
AMBRA1-201ENST00000314845 RBM19Q9Y4C8 960 aaKnown RBP14.95□□□□□ -0.02
AMBRA1-201ENST00000314845 CHAF1AQ13111 956 aaPredicted RBP14.95□□□□□ -0.02
AMBRA1-201ENST00000314845 USP47Q96K76 1375 aa14.94□□□□□ -0.02
AMBRA1-201ENST00000314845 NAP1L5Q96NT1 182 aaPredicted RBP14.94□□□□□ -0.02
AMBRA1-201ENST00000314845 MINK1Q8N4C8 1332 aaPredicted RBP14.94□□□□□ -0.02
AMBRA1-201ENST00000314845 C1orf141Q5JVX7 400 aa14.93□□□□□ -0.02
AMBRA1-201ENST00000314845 TEFQ10587 303 aa14.93□□□□□ -0.02
AMBRA1-201ENST00000314845 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.93□□□□□ -0.02
AMBRA1-201ENST00000314845 CCDC34Q96HJ3 373 aa14.93□□□□□ -0.02
AMBRA1-201ENST00000314845 DRC7Q8IY82 874 aa14.92□□□□□ -0.02
AMBRA1-201ENST00000314845 MFAP1P55081 439 aaKnown RBP14.92□□□□□ -0.02
AMBRA1-201ENST00000314845 NGEFQ8N5V2 710 aa14.92□□□□□ -0.02
AMBRA1-201ENST00000314845 PRKRIP1Q9H875 184 aaPredicted RBP14.92□□□□□ -0.02
AMBRA1-201ENST00000314845 RRP7AQ9Y3A4 280 aaKnown RBP14.92□□□□□ -0.02
AMBRA1-201ENST00000314845 E9PSI1 815 aa14.91□□□□□ -0.02
AMBRA1-201ENST00000314845 FAM69CQ0P6D2 419 aa14.91□□□□□ -0.02
AMBRA1-201ENST00000314845 CLSTN1O94985 981 aa14.91□□□□□ -0.02
AMBRA1-201ENST00000314845 MSNP26038 577 aaKnown RBP14.91□□□□□ -0.02
AMBRA1-201ENST00000314845 SYAP1Q96A49 352 aaPredicted RBP14.91□□□□□ -0.02
AMBRA1-201ENST00000314845 G3V3G9 751 aa14.9□□□□□ -0.02
AMBRA1-201ENST00000314845 DCAF8Q5TAQ9 597 aa14.9□□□□□ -0.02
AMBRA1-201ENST00000314845 SLKQ9H2G2 1235 aaPredicted RBP14.9□□□□□ -0.02
AMBRA1-201ENST00000314845 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
AMBRA1-201ENST00000314845 RAD54L2Q9Y4B4 1467 aa14.89□□□□□ -0.03
AMBRA1-201ENST00000314845 FRAT2O75474 233 aaPredicted RBP14.89□□□□□ -0.03
AMBRA1-201ENST00000314845 EVA1CP58658 441 aa14.89□□□□□ -0.03
AMBRA1-201ENST00000314845 ZKSCAN2Q63HK3 967 aa14.88□□□□□ -0.03
AMBRA1-201ENST00000314845 ELL2O00472 640 aaPredicted RBP14.88□□□□□ -0.03
AMBRA1-201ENST00000314845 KIF3AQ9Y496 699 aa14.87□□□□□ -0.03
AMBRA1-201ENST00000314845 DIAPH1O60610 1272 aaKnown RBP14.87□□□□□ -0.03
AMBRA1-201ENST00000314845 HSP90B1P14625 803 aaKnown RBP14.87□□□□□ -0.03
AMBRA1-201ENST00000314845 FGD6Q6ZV73 1430 aa14.87□□□□□ -0.03
AMBRA1-201ENST00000314845 NEXNQ0ZGT2 675 aa14.86□□□□□ -0.03
AMBRA1-201ENST00000314845 CSPP1Q1MSJ5 1256 aa14.85□□□□□ -0.03
AMBRA1-201ENST00000314845 TTC5Q8N0Z6 440 aa14.85□□□□□ -0.03
AMBRA1-201ENST00000314845 ST18O60284 1047 aa14.85□□□□□ -0.03
AMBRA1-201ENST00000314845 PSME1Q06323 249 aa14.85□□□□□ -0.03
AMBRA1-201ENST00000314845 APAF1O14727 1248 aa14.84□□□□□ -0.03
AMBRA1-201ENST00000314845 TOMM22Q9NS69 142 aa14.84□□□□□ -0.03
AMBRA1-201ENST00000314845 CUX1P39880 1505 aa14.83□□□□□ -0.03
AMBRA1-201ENST00000314845 CENPQQ7L2Z9 268 aaPredicted RBP14.83□□□□□ -0.03
AMBRA1-201ENST00000314845 ZNF644Q9H582 1327 aaPredicted RBP14.83□□□□□ -0.04
AMBRA1-201ENST00000314845 BCL2L13Q9BXK5 485 aa14.83□□□□□ -0.04
AMBRA1-201ENST00000314845 AQRO60306 1485 aaKnown RBP eCLIP14.83□□□□□ -0.043e-7■■■■■ 29
AMBRA1-201ENST00000314845 KIAA2012Q0VF49 1180 aa14.83□□□□□ -0.04
AMBRA1-201ENST00000314845 CHMP4CQ96CF2 233 aa14.83□□□□□ -0.04
AMBRA1-201ENST00000314845 TPM4P67936 248 aa14.82□□□□□ -0.04
AMBRA1-201ENST00000314845 ZBED9Q6R2W3 1325 aa14.82□□□□□ -0.04
AMBRA1-201ENST00000314845 KIF16BQ96L93 1317 aa14.82□□□□□ -0.04
AMBRA1-201ENST00000314845 ANKRD50Q9ULJ7 1429 aa14.82□□□□□ -0.04
AMBRA1-201ENST00000314845 LRRFIP1Q32MZ4 808 aaKnown RBP14.81□□□□□ -0.04
AMBRA1-201ENST00000314845 API5Q9BZZ5 524 aaKnown RBP14.81□□□□□ -0.04
AMBRA1-201ENST00000314845 GRIN2BQ13224 1484 aa14.8□□□□□ -0.04
AMBRA1-201ENST00000314845 RTN4Q9NQC3 1192 aaKnown RBP14.8□□□□□ -0.04
AMBRA1-201ENST00000314845 ANKRD45Q5TZF3 282 aa14.8□□□□□ -0.04
AMBRA1-201ENST00000314845 IPO9Q96P70 1041 aaKnown RBP14.79□□□□□ -0.04
AMBRA1-201ENST00000314845 C9orf78Q9NZ63 289 aaPredicted RBP14.79□□□□□ -0.04
AMBRA1-201ENST00000314845 DDX58O95786 925 aaKnown RBP14.79□□□□□ -0.04
AMBRA1-201ENST00000314845 RASSF8Q8NHQ8 419 aa14.79□□□□□ -0.04
AMBRA1-201ENST00000314845 GZF1Q9H116 711 aaPredicted RBP14.79□□□□□ -0.04
AMBRA1-201ENST00000314845 RIPK4P57078 832 aa14.78□□□□□ -0.04
AMBRA1-201ENST00000314845 DDX19BQ9UMR2 479 aa14.78□□□□□ -0.04
AMBRA1-201ENST00000314845 RRP1P56182 461 aaKnown RBP14.78□□□□□ -0.04
AMBRA1-201ENST00000314845 EIF2S2P20042 333 aaKnown RBP14.78□□□□□ -0.04
AMBRA1-201ENST00000314845 NOL8Q76FK4 1167 aaKnown RBP14.77□□□□□ -0.04
AMBRA1-201ENST00000314845 RILPL2Q969X0 211 aa14.77□□□□□ -0.04
AMBRA1-201ENST00000314845 CASKIN1Q8WXD9 1431 aa14.77□□□□□ -0.04
AMBRA1-201ENST00000314845 MIA2Q96PC5 1412 aa14.77□□□□□ -0.04
AMBRA1-201ENST00000314845 ATF3P18847 181 aa14.77□□□□□ -0.05
AMBRA1-201ENST00000314845 DEKP35659 375 aaKnown RBP14.77□□□□□ -0.05
AMBRA1-201ENST00000314845 FYCO1Q9BQS8 1478 aa14.77□□□□□ -0.05
AMBRA1-201ENST00000314845 COG6Q9Y2V7 657 aa14.77□□□□□ -0.05
AMBRA1-201ENST00000314845 RUNDC1Q96C34 613 aa14.76□□□□□ -0.05
AMBRA1-201ENST00000314845 RAPGEF4Q8WZA2 1011 aa14.76□□□□□ -0.05
AMBRA1-201ENST00000314845 LRRC9Q6ZRR7 1453 aa14.76□□□□□ -0.05
AMBRA1-201ENST00000314845 SF3A1Q15459 793 aaKnown RBP14.75□□□□□ -0.05
AMBRA1-201ENST00000314845 RUFY2Q8WXA3 655 aa14.75□□□□□ -0.05
AMBRA1-201ENST00000314845 GNAI1P63096 354 aa14.75□□□□□ -0.05
AMBRA1-201ENST00000314845 AFAP1Q8N556 730 aa14.75□□□□□ -0.05
AMBRA1-201ENST00000314845 FAM161AQ3B820 660 aa14.75□□□□□ -0.05
AMBRA1-201ENST00000314845 DIAPH3Q9NSV4 1193 aa14.75□□□□□ -0.05
AMBRA1-201ENST00000314845 ROCK1Q13464 1354 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms