RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 ZFYVE16Q7Z3T8 1539 aa26.57■■□□□ 1.84
CD55-201ENST00000314754 USP47Q96K76 1375 aa26.57■■□□□ 1.84
CD55-201ENST00000314754 SPAG9O60271 1321 aaKnown RBP26.57■■□□□ 1.84
CD55-201ENST00000314754 KDM5CP41229 1560 aa26.56■■□□□ 1.84
CD55-201ENST00000314754 BCORL1Q5H9F3 1711 aa26.56■■□□□ 1.84
CD55-201ENST00000314754 PLA2R1Q13018 1463 aa26.55■■□□□ 1.84
CD55-201ENST00000314754 AFAP1Q8N556 730 aa26.55■■□□□ 1.84
CD55-201ENST00000314754 KIF7Q2M1P5 1343 aa26.54■■□□□ 1.84
CD55-201ENST00000314754 ATP10AO60312 1499 aa26.52■■□□□ 1.84
CD55-201ENST00000314754 KDM2AQ9Y2K7 1162 aa26.51■■□□□ 1.83
CD55-201ENST00000314754 DCAF11Q8TEB1 546 aa26.5■■□□□ 1.83
CD55-201ENST00000314754 INO80Q9ULG1 1556 aaPredicted RBP26.49■■□□□ 1.83
CD55-201ENST00000314754 ATP7AQ04656 1500 aa26.47■■□□□ 1.83
CD55-201ENST00000314754 ADGRL1O94910 1474 aa26.47■■□□□ 1.83
CD55-201ENST00000314754 ARID4BQ4LE39 1312 aaPredicted RBP26.45■■□□□ 1.82
CD55-201ENST00000314754 NPM1P06748 294 aaKnown RBP eCLIP26.45■■□□□ 1.82
CD55-201ENST00000314754 CARD11Q9BXL7 1154 aa26.45■■□□□ 1.82
CD55-201ENST00000314754 SCAPERQ9BY12 1400 aa26.44■■□□□ 1.82
CD55-201ENST00000314754 DEPDC5O75140 1603 aa26.43■■□□□ 1.82
CD55-201ENST00000314754 PRAG1Q86YV5 1406 aa26.43■■□□□ 1.82
CD55-201ENST00000314754 E9PCH4 1651 aa26.42■■□□□ 1.82
CD55-201ENST00000314754 TRPM1Q7Z4N2 1603 aa26.41■■□□□ 1.82
CD55-201ENST00000314754 A2MP01023 1474 aa26.41■■□□□ 1.82
CD55-201ENST00000314754 RGL3Q3MIN7 710 aa26.39■■□□□ 1.82
CD55-201ENST00000314754 PRKRIP1Q9H875 184 aaPredicted RBP26.39■■□□□ 1.81
CD55-201ENST00000314754 ROCK2O75116 1388 aaKnown RBP26.38■■□□□ 1.81
CD55-201ENST00000314754 EIF2AK4Q9P2K8 1649 aaKnown RBP26.36■■□□□ 1.81
CD55-201ENST00000314754 KIDINS220Q9ULH0 1771 aa26.34■■□□□ 1.81
CD55-201ENST00000314754 VWDEQ8N2E2 1590 aa26.33■■□□□ 1.81
CD55-201ENST00000314754 TET3O43151 1660 aa26.33■■□□□ 1.81
CD55-201ENST00000314754 CFAP74Q9C0B2 1584 aa26.33■■□□□ 1.81
CD55-201ENST00000314754 DHX29Q7Z478 1369 aaKnown RBP26.33■■□□□ 1.81
CD55-201ENST00000314754 CCDC184Q52MB2 194 aa26.33■■□□□ 1.8
CD55-201ENST00000314754 ZNF518AQ6AHZ1 1483 aa26.32■■□□□ 1.8
CD55-201ENST00000314754 SPHKAPQ2M3C7 1700 aa26.32■■□□□ 1.8
CD55-201ENST00000314754 GPRASP1Q5JY77 1395 aa26.32■■□□□ 1.8
CD55-201ENST00000314754 TRPM2O94759 1503 aa26.32■■□□□ 1.8
CD55-201ENST00000314754 POLR3GLQ9BT43 218 aa26.31■■□□□ 1.8
CD55-201ENST00000314754 KANK1Q14678 1352 aa26.31■■□□□ 1.8
CD55-201ENST00000314754 LAMC1P11047 1609 aa26.31■■□□□ 1.8
CD55-201ENST00000314754 ST20-MTHFSA0A0A6YYL1 179 aa26.3■■□□□ 1.8
CD55-201ENST00000314754 PRDM15P57071 1507 aaPredicted RBP26.3■■□□□ 1.8
CD55-201ENST00000314754 CD109Q6YHK3 1445 aa26.3■■□□□ 1.8
CD55-201ENST00000314754 MYT1LQ9UL68 1186 aa26.3■■□□□ 1.8
CD55-201ENST00000314754 MROH1Q8NDA8 1641 aa26.29■■□□□ 1.8
CD55-201ENST00000314754 PTPRTO14522 1441 aa26.29■■□□□ 1.8
CD55-201ENST00000314754 NBPF1Q3BBV0 1214 aa26.27■■□□□ 1.8
CD55-201ENST00000314754 CEP152O94986 1710 aa26.26■■□□□ 1.79
CD55-201ENST00000314754 KIF3BO15066 747 aa26.26■■□□□ 1.79
CD55-201ENST00000314754 SUPT16HQ9Y5B9 1047 aaKnown RBP26.26■■□□□ 1.79
CD55-201ENST00000314754 CLTCL1P53675 1640 aa26.25■■□□□ 1.79
CD55-201ENST00000314754 POGZQ7Z3K3 1410 aa26.23■■□□□ 1.79
CD55-201ENST00000314754 HNRNPUQ00839 825 aaKnown RBP eCLIP26.2■■□□□ 1.78
CD55-201ENST00000314754 MRS2Q9HD23 443 aa26.2■■□□□ 1.78
CD55-201ENST00000314754 RNF17Q9BXT8 1623 aaKnown RBP26.19■■□□□ 1.78
CD55-201ENST00000314754 MLH3Q9UHC1 1453 aa26.18■■□□□ 1.78
CD55-201ENST00000314754 STAC3Q96MF2 364 aa26.18■■□□□ 1.78
CD55-201ENST00000314754 MADDQ8WXG6 1647 aa26.17■■□□□ 1.78
CD55-201ENST00000314754 CNGB1Q14028 1251 aaPredicted RBP26.16■■□□□ 1.78
CD55-201ENST00000314754 NEURL4Q96JN8 1562 aa26.15■■□□□ 1.78
CD55-201ENST00000314754 HECW2Q9P2P5 1572 aa26.15■■□□□ 1.78
CD55-201ENST00000314754 EFCAB6Q5THR3 1501 aa26.15■■□□□ 1.78
CD55-201ENST00000314754 NEO1Q92859 1461 aa26.15■■□□□ 1.78
CD55-201ENST00000314754 PPRC1Q5VV67 1664 aaKnown RBP26.14■■□□□ 1.78
CD55-201ENST00000314754 LMTK2Q8IWU2 1503 aa26.14■■□□□ 1.78
CD55-201ENST00000314754 FRMPD1Q5SYB0 1578 aa26.14■■□□□ 1.77
CD55-201ENST00000314754 UGGT1Q9NYU2 1555 aa26.13■■□□□ 1.77
CD55-201ENST00000314754 COL17A1Q9UMD9 1497 aaPredicted RBP26.11■■□□□ 1.77
CD55-201ENST00000314754 ABCA6Q8N139 1617 aa26.11■■□□□ 1.77
CD55-201ENST00000314754 FAM9BQ8IZU0 186 aa26.1■■□□□ 1.77
CD55-201ENST00000314754 TESK2Q96S53 571 aa26.08■■□□□ 1.77
CD55-201ENST00000314754 KTN1Q86UP2 1357 aaKnown RBP26.07■■□□□ 1.76
CD55-201ENST00000314754 CFAP65Q6ZU64 1925 aaKnown RBP26.06■■□□□ 1.76
CD55-201ENST00000314754 KIF1BO60333 1816 aa26.05■■□□□ 1.76
CD55-201ENST00000314754 IQGAP1P46940 1657 aa26.05■■□□□ 1.76
CD55-201ENST00000314754 DISP3Q9P2K9 1392 aa26.05■■□□□ 1.76
CD55-201ENST00000314754 MAP3K4Q9Y6R4 1608 aa26.04■■□□□ 1.76
CD55-201ENST00000314754 MROH2AA6NES4 1674 aa26.04■■□□□ 1.76
CD55-201ENST00000314754 RAPGEF3O95398 923 aa26.03■■□□□ 1.76
CD55-201ENST00000314754 RIMBP3CA6NJZ7 1639 aa26.02■■□□□ 1.76
CD55-201ENST00000314754 RIMBP3BA6NNM3 1639 aa26.02■■□□□ 1.76
CD55-201ENST00000314754 RIMBP3Q9UFD9 1639 aa26.02■■□□□ 1.76
CD55-201ENST00000314754 NEFLP07196 543 aa26.02■■□□□ 1.76
CD55-201ENST00000314754 CYB5RLQ6IPT4 315 aa26.02■■□□□ 1.76
CD55-201ENST00000314754 RICTORQ6R327 1708 aa26.01■■□□□ 1.75
CD55-201ENST00000314754 KIAA1210Q9ULL0 1709 aa26.01■■□□□ 1.75
CD55-201ENST00000314754 FKBP8Q14318 412 aa26■■□□□ 1.75
CD55-201ENST00000314754 ZBED9Q6R2W3 1325 aa26■■□□□ 1.75
CD55-201ENST00000314754 TMF1P82094 1093 aa26■■□□□ 1.75
CD55-201ENST00000314754 MYOM2P54296 1465 aa26■■□□□ 1.75
CD55-201ENST00000314754 IFT172Q9UG01 1749 aa25.99■■□□□ 1.75
CD55-201ENST00000314754 RALBP1Q15311 655 aa25.99■■□□□ 1.75
CD55-201ENST00000314754 GLI2P10070 1586 aa25.98■■□□□ 1.75
CD55-201ENST00000314754 SCAF11Q99590 1463 aaKnown RBP25.98■■□□□ 1.75
CD55-201ENST00000314754 DIP2CQ9Y2E4 1556 aa25.97■■□□□ 1.75
CD55-201ENST00000314754 NPATQ14207 1427 aa25.96■■□□□ 1.75
CD55-201ENST00000314754 GGT6Q6P531 493 aa25.96■■□□□ 1.75
CD55-201ENST00000314754 MYBBP1AQ9BQG0 1328 aaKnown RBP25.95■■□□□ 1.74
CD55-201ENST00000314754 ABCC3O15438 1527 aa25.94■■□□□ 1.74
CD55-201ENST00000314754 BCANQ96GW7 911 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms