RNA–Protein interactions for RNA: ENST00000313050.11

SEC16A-203, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SEC16A, Length 8,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-203ENST00000313050 CCER2I3L3R5 266 aa12.88□□□□□ -0.35
SEC16A-203ENST00000313050 HOOK1Q9UJC3 728 aaKnown RBP12.88□□□□□ -0.35
SEC16A-203ENST00000313050 RBM10P98175 930 aaKnown RBP12.87□□□□□ -0.35
SEC16A-203ENST00000313050 H3BQV1 296 aa12.87□□□□□ -0.35
SEC16A-203ENST00000313050 IFFO2Q5TF58 517 aa12.87□□□□□ -0.35
SEC16A-203ENST00000313050 BCCIPQ9P287 314 aaKnown RBP eCLIP12.87□□□□□ -0.35
SEC16A-203ENST00000313050 CALCOCO1Q9P1Z2 691 aa12.87□□□□□ -0.35
SEC16A-203ENST00000313050 P3H3Q8IVL6 736 aa12.87□□□□□ -0.35
SEC16A-203ENST00000313050 EIF3JO75822 258 aaKnown RBP12.86□□□□□ -0.35
SEC16A-203ENST00000313050 MRE11P49959 708 aa12.86□□□□□ -0.35
SEC16A-203ENST00000313050 CCP110O43303 1012 aa12.86□□□□□ -0.35
SEC16A-203ENST00000313050 FOXD4L1Q9NU39 408 aa12.86□□□□□ -0.35
SEC16A-203ENST00000313050 RCAN3Q9UKA8 241 aa12.86□□□□□ -0.35
SEC16A-203ENST00000313050 CENPHQ9H3R5 247 aa12.85□□□□□ -0.35
SEC16A-203ENST00000313050 RBM25P49756 843 aaKnown RBP12.85□□□□□ -0.35
SEC16A-203ENST00000313050 ERICH4A6NGS2 130 aa12.85□□□□□ -0.35
SEC16A-203ENST00000313050 NPHP1O15259 732 aa12.85□□□□□ -0.35
SEC16A-203ENST00000313050 CHMP4CQ96CF2 233 aa12.84□□□□□ -0.35
SEC16A-203ENST00000313050 SPATA24Q86W54 205 aa12.84□□□□□ -0.35
SEC16A-203ENST00000313050 BBXQ8WY36 941 aaPredicted RBP12.84□□□□□ -0.35
SEC16A-203ENST00000313050 PCMTD1Q96MG8 357 aaPredicted RBP12.83□□□□□ -0.35
SEC16A-203ENST00000313050 EEA1Q15075 1411 aa12.83□□□□□ -0.35
SEC16A-203ENST00000313050 SKIDA1Q1XH10 827 aa12.83□□□□□ -0.36
SEC16A-203ENST00000313050 FOXD4L5Q5VV16 416 aaPredicted RBP12.83□□□□□ -0.36
SEC16A-203ENST00000313050 FOXD4L4Q8WXT5 416 aaPredicted RBP12.83□□□□□ -0.36
SEC16A-203ENST00000313050 TRIM6-TRIM34B2RNG4 842 aa12.82□□□□□ -0.36
SEC16A-203ENST00000313050 NF2P35240 595 aa12.82□□□□□ -0.36
SEC16A-203ENST00000313050 DNAJC2Q99543 621 aaKnown RBP12.82□□□□□ -0.36
SEC16A-203ENST00000313050 NAT10Q9H0A0 1025 aaKnown RBP12.82□□□□□ -0.36
SEC16A-203ENST00000313050 NAP1L1P55209 391 aaKnown RBP12.82□□□□□ -0.36
SEC16A-203ENST00000313050 CLGNO14967 610 aa12.82□□□□□ -0.36
SEC16A-203ENST00000313050 FAM107BQ9H098 131 aa12.82□□□□□ -0.36
SEC16A-203ENST00000313050 UQCRHLA0A096LP55 91 aa12.82□□□□□ -0.36
SEC16A-203ENST00000313050 UQCRHP07919 91 aa12.82□□□□□ -0.36
SEC16A-203ENST00000313050 CCAR1Q8IX12 1150 aaKnown RBP12.81□□□□□ -0.36
SEC16A-203ENST00000313050 FAM161AQ3B820 660 aa12.81□□□□□ -0.36
SEC16A-203ENST00000313050 CAVIN1Q6NZI2 390 aaKnown RBP12.81□□□□□ -0.36
SEC16A-203ENST00000313050 TICAM2Q86XR7 235 aa12.8□□□□□ -0.36
SEC16A-203ENST00000313050 IPO4Q8TEX9 1081 aaKnown RBP12.8□□□□□ -0.36
SEC16A-203ENST00000313050 SASS6Q6UVJ0 657 aa12.8□□□□□ -0.36
SEC16A-203ENST00000313050 GTF2A1P52655 376 aaPredicted RBP12.8□□□□□ -0.36
SEC16A-203ENST00000313050 ENOX2Q16206 610 aaKnown RBP12.8□□□□□ -0.36
SEC16A-203ENST00000313050 PDIA4P13667 645 aaKnown RBP12.79□□□□□ -0.36
SEC16A-203ENST00000313050 ERLIN2O94905 339 aa12.79□□□□□ -0.36
SEC16A-203ENST00000313050 TNNT1P13805 278 aa12.79□□□□□ -0.36
SEC16A-203ENST00000313050 ITPRIPQ8IWB1 547 aa12.79□□□□□ -0.36
SEC16A-203ENST00000313050 PDCL2Q8N4E4 241 aa12.78□□□□□ -0.36
SEC16A-203ENST00000313050 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.78□□□□□ -0.362e-6■■□□□ 11.6
SEC16A-203ENST00000313050 ZMYND15Q9H091 742 aa12.78□□□□□ -0.36
SEC16A-203ENST00000313050 ANKRD18AQ8IVF6 992 aa12.78□□□□□ -0.36
SEC16A-203ENST00000313050 APBB1O00213 710 aa12.78□□□□□ -0.36
SEC16A-203ENST00000313050 NOL8Q76FK4 1167 aaKnown RBP12.78□□□□□ -0.36
SEC16A-203ENST00000313050 CGNQ9P2M7 1197 aaKnown RBP12.78□□□□□ -0.36
SEC16A-203ENST00000313050 EZRP15311 586 aaKnown RBP12.77□□□□□ -0.36
SEC16A-203ENST00000313050 ODF2Q5BJF6 829 aa12.77□□□□□ -0.36
SEC16A-203ENST00000313050 BCL11BQ9C0K0 894 aaPredicted RBP12.77□□□□□ -0.36
SEC16A-203ENST00000313050 FAM184AQ8NB25 1140 aa12.77□□□□□ -0.36
SEC16A-203ENST00000313050 SEPT7Q16181 437 aaKnown RBP12.77□□□□□ -0.37
SEC16A-203ENST00000313050 TMCO5BA8MYB1 307 aa12.77□□□□□ -0.37
SEC16A-203ENST00000313050 E9PSI1 815 aa12.77□□□□□ -0.37
SEC16A-203ENST00000313050 ERLIN1O75477 346 aa12.77□□□□□ -0.37
SEC16A-203ENST00000313050 SETSIPP0DME0 302 aa12.77□□□□□ -0.37
SEC16A-203ENST00000313050 CHMP4AQ9BY43 222 aa12.77□□□□□ -0.37
SEC16A-203ENST00000313050 RABEP1Q15276 862 aa12.76□□□□□ -0.37
SEC16A-203ENST00000313050 HSP90AB2PQ58FF8 381 aa12.76□□□□□ -0.37
SEC16A-203ENST00000313050 PDCL3Q9H2J4 239 aa12.76□□□□□ -0.37
SEC16A-203ENST00000313050 GOLGA6L10A0A0M3HER8 536 aa12.76□□□□□ -0.37
SEC16A-203ENST00000313050 IL27Q8NEV9 243 aa12.76□□□□□ -0.37
SEC16A-203ENST00000313050 RNF20Q5VTR2 975 aa12.76□□□□□ -0.37
SEC16A-203ENST00000313050 CCDC146Q8IYE0 955 aa12.76□□□□□ -0.37
SEC16A-203ENST00000313050 CT47A1Q5JQC4 288 aaPredicted RBP12.75□□□□□ -0.37
SEC16A-203ENST00000313050 CFAP57Q96MR6 1250 aa12.75□□□□□ -0.37
SEC16A-203ENST00000313050 DHX8Q14562 1220 aaKnown RBP12.75□□□□□ -0.37
SEC16A-203ENST00000313050 LRRCC1Q9C099 1032 aa12.75□□□□□ -0.37
SEC16A-203ENST00000313050 SLC26A8Q96RN1 970 aa12.75□□□□□ -0.37
SEC16A-203ENST00000313050 PLEKHG5O94827 1062 aa12.75□□□□□ -0.37
SEC16A-203ENST00000313050 LETM1O95202 739 aaPredicted RBP12.75□□□□□ -0.37
SEC16A-203ENST00000313050 BRPF3Q9ULD4 1205 aa12.75□□□□□ -0.37
SEC16A-203ENST00000313050 PDE4AP27815 886 aa12.74□□□□□ -0.37
SEC16A-203ENST00000313050 HOMEZQ8IX15 550 aa12.74□□□□□ -0.37
SEC16A-203ENST00000313050 CHMP5Q9NZZ3 219 aa12.74□□□□□ -0.37
SEC16A-203ENST00000313050 KAT6BQ8WYB5 2073 aa12.74□□□□□ -0.37
SEC16A-203ENST00000313050 CENPQQ7L2Z9 268 aaPredicted RBP12.74□□□□□ -0.37
SEC16A-203ENST00000313050 FOXD4L6Q3SYB3 417 aaPredicted RBP12.74□□□□□ -0.37
SEC16A-203ENST00000313050 FOXD4L3Q6VB84 417 aaPredicted RBP12.74□□□□□ -0.37
SEC16A-203ENST00000313050 PAIP2Q9BPZ3 127 aaKnown RBP12.73□□□□□ -0.37
SEC16A-203ENST00000313050 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.73□□□□□ -0.371e-6■■■■■ 55.4
SEC16A-203ENST00000313050 CPSF2Q9P2I0 782 aaKnown RBP12.73□□□□□ -0.37
SEC16A-203ENST00000313050 SHTN1A0MZ66 631 aa12.73□□□□□ -0.37
SEC16A-203ENST00000313050 RBM33Q96EV2 1170 aaKnown RBP12.73□□□□□ -0.37
SEC16A-203ENST00000313050 GORABQ5T7V8 394 aa12.73□□□□□ -0.37
SEC16A-203ENST00000313050 CHIC2Q9UKJ5 165 aa12.73□□□□□ -0.37
SEC16A-203ENST00000313050 CGNL1Q0VF96 1302 aa12.73□□□□□ -0.37
SEC16A-203ENST00000313050 CCDC47Q96A33 483 aaKnown RBP12.73□□□□□ -0.37
SEC16A-203ENST00000313050 TTLL5Q6EMB2 1281 aa12.72□□□□□ -0.37
SEC16A-203ENST00000313050 NFKBIBQ15653 356 aa12.72□□□□□ -0.37
SEC16A-203ENST00000313050 TIGD1Q96MW7 591 aa12.72□□□□□ -0.37
SEC16A-203ENST00000313050 SEPT11Q9NVA2 429 aaKnown RBP12.72□□□□□ -0.37
SEC16A-203ENST00000313050 NUCB2P80303 420 aa12.72□□□□□ -0.37
SEC16A-203ENST00000313050 SEPT6Q14141 434 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms