RNA–Protein interactions for RNA: ENST00000311637.9

ATP9A-201, Transcript of ATPase phospholipid transporting 9A (putative), humanhuman

TSL 1 (best) BASIC

Gene ATP9A, Length 7,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP9A-201ENST00000311637 CUX2O14529 1486 aa12.31□□□□□ -0.44
ATP9A-201ENST00000311637 PES1O00541 588 aaKnown RBP12.31□□□□□ -0.44
ATP9A-201ENST00000311637 EIF2S2P20042 333 aaKnown RBP12.3□□□□□ -0.44
ATP9A-201ENST00000311637 IKQ13123 557 aaPredicted RBP12.3□□□□□ -0.44
ATP9A-201ENST00000311637 B4GALNT3Q6L9W6 998 aa12.29□□□□□ -0.44
ATP9A-201ENST00000311637 R3HCC1Q9Y3T6 440 aaKnown RBP12.29□□□□□ -0.44
ATP9A-201ENST00000311637 TMEM132AQ24JP5 1023 aa12.29□□□□□ -0.44
ATP9A-201ENST00000311637 HSCBQ8IWL3 235 aa12.29□□□□□ -0.44
ATP9A-201ENST00000311637 COG3Q96JB2 828 aa12.29□□□□□ -0.44
ATP9A-201ENST00000311637 FYB1O15117 783 aa12.28□□□□□ -0.44
ATP9A-201ENST00000311637 TDRD9Q8NDG6 1382 aaKnown RBP12.28□□□□□ -0.44
ATP9A-201ENST00000311637 NLRP2Q9NX02 1062 aa12.28□□□□□ -0.44
ATP9A-201ENST00000311637 APPP05067 770 aa12.28□□□□□ -0.44
ATP9A-201ENST00000311637 PROSER2Q86WR7 435 aaPredicted RBP12.28□□□□□ -0.44
ATP9A-201ENST00000311637 CARMIL1Q5VZK9 1371 aa12.27□□□□□ -0.44
ATP9A-201ENST00000311637 IBSPP21815 317 aaPredicted RBP12.27□□□□□ -0.44
ATP9A-201ENST00000311637 NUTM2GQ5VZR2 741 aa12.27□□□□□ -0.44
ATP9A-201ENST00000311637 WWC2Q6AWC2 1192 aa12.27□□□□□ -0.44
ATP9A-201ENST00000311637 NEXNQ0ZGT2 675 aa12.27□□□□□ -0.45
ATP9A-201ENST00000311637 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.27□□□□□ -0.456e-9■■■■■ 134.6
ATP9A-201ENST00000311637 ROCK2O75116 1388 aaKnown RBP12.27□□□□□ -0.45
ATP9A-201ENST00000311637 RAPGEF4Q8WZA2 1011 aa12.27□□□□□ -0.45
ATP9A-201ENST00000311637 SIN3AQ96ST3 1273 aa12.26□□□□□ -0.45
ATP9A-201ENST00000311637 EIF3AQ14152 1382 aaKnown RBP12.26□□□□□ -0.45
ATP9A-201ENST00000311637 HTATSF1O43719 755 aaKnown RBP12.26□□□□□ -0.45
ATP9A-201ENST00000311637 GOLGA3Q08378 1498 aa12.26□□□□□ -0.45
ATP9A-201ENST00000311637 NECTIN2Q92692 538 aa12.25□□□□□ -0.45
ATP9A-201ENST00000311637 NUP155O75694 1391 aa12.25□□□□□ -0.45
ATP9A-201ENST00000311637 SYNE3Q6ZMZ3 975 aa12.25□□□□□ -0.45
ATP9A-201ENST00000311637 CCDC27Q2M243 656 aa12.25□□□□□ -0.45
ATP9A-201ENST00000311637 MTMR7Q9Y216 660 aa12.25□□□□□ -0.45
ATP9A-201ENST00000311637 NOL8Q76FK4 1167 aaKnown RBP12.25□□□□□ -0.45
ATP9A-201ENST00000311637 RBM42Q9BTD8 480 aaKnown RBP12.24□□□□□ -0.45
ATP9A-201ENST00000311637 HMMRO75330 724 aa12.24□□□□□ -0.45
ATP9A-201ENST00000311637 LMOD3Q0VAK6 560 aa12.24□□□□□ -0.45
ATP9A-201ENST00000311637 PDE3BQ13370 1112 aa12.24□□□□□ -0.45
ATP9A-201ENST00000311637 MINK1Q8N4C8 1332 aaPredicted RBP12.24□□□□□ -0.45
ATP9A-201ENST00000311637 SOGA1O94964 1423 aa12.24□□□□□ -0.45
ATP9A-201ENST00000311637 TPM4P67936 248 aa12.23□□□□□ -0.45
ATP9A-201ENST00000311637 PPM1FP49593 454 aaPredicted RBP12.23□□□□□ -0.45
ATP9A-201ENST00000311637 WDR70Q9NW82 654 aa12.23□□□□□ -0.45
ATP9A-201ENST00000311637 MYCNP04198 464 aaPredicted RBP12.23□□□□□ -0.45
ATP9A-201ENST00000311637 PLIN1O60240 522 aa12.23□□□□□ -0.45
ATP9A-201ENST00000311637 TPD52L1Q16890 204 aaPredicted RBP12.22□□□□□ -0.45
ATP9A-201ENST00000311637 JPH4Q96JJ6 628 aa12.22□□□□□ -0.45
ATP9A-201ENST00000311637 RBM5P52756 815 aaKnown RBP eCLIP12.22□□□□□ -0.45
ATP9A-201ENST00000311637 ESCO1Q5FWF5 840 aa12.22□□□□□ -0.45
ATP9A-201ENST00000311637 SPDYE4A6NLX3 237 aa12.21□□□□□ -0.45
ATP9A-201ENST00000311637 SMC4Q9NTJ3 1288 aa12.21□□□□□ -0.45
ATP9A-201ENST00000311637 C9orf78Q9NZ63 289 aaPredicted RBP12.21□□□□□ -0.45
ATP9A-201ENST00000311637 GRM1Q13255 1194 aa12.21□□□□□ -0.45
ATP9A-201ENST00000311637 VSIG10Q8N0Z9 540 aa12.21□□□□□ -0.45
ATP9A-201ENST00000311637 WDHD1O75717 1129 aaPredicted RBP12.21□□□□□ -0.45
ATP9A-201ENST00000311637 SF3A1Q15459 793 aaKnown RBP12.21□□□□□ -0.46
ATP9A-201ENST00000311637 FHAD1B1AJZ9 1412 aa12.2□□□□□ -0.46
ATP9A-201ENST00000311637 TCERG1O14776 1098 aaKnown RBP12.19□□□□□ -0.46
ATP9A-201ENST00000311637 EEA1Q15075 1411 aa12.19□□□□□ -0.46
ATP9A-201ENST00000311637 ELL2O00472 640 aaPredicted RBP12.19□□□□□ -0.46
ATP9A-201ENST00000311637 TTLL12Q14166 644 aaPredicted RBP12.19□□□□□ -0.46
ATP9A-201ENST00000311637 ANKRD30AQ9BXX3 1397 aa12.18□□□□□ -0.46
ATP9A-201ENST00000311637 VGFO15240 615 aaPredicted RBP12.18□□□□□ -0.46
ATP9A-201ENST00000311637 C16orf71Q8IYS4 520 aaPredicted RBP12.18□□□□□ -0.46
ATP9A-201ENST00000311637 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.17□□□□□ -0.46
ATP9A-201ENST00000311637 SUPT16HQ9Y5B9 1047 aaKnown RBP12.17□□□□□ -0.46
ATP9A-201ENST00000311637 KTN1Q86UP2 1357 aaKnown RBP12.17□□□□□ -0.46
ATP9A-201ENST00000311637 LRRFIP1Q32MZ4 808 aaKnown RBP12.17□□□□□ -0.46
ATP9A-201ENST00000311637 CCDC146Q8IYE0 955 aa12.17□□□□□ -0.46
ATP9A-201ENST00000311637 TMEM87AQ8NBN3 555 aa12.17□□□□□ -0.46
ATP9A-201ENST00000311637 NACADO15069 1562 aa12.16□□□□□ -0.46
ATP9A-201ENST00000311637 CEP164Q9UPV0 1460 aa12.16□□□□□ -0.46
ATP9A-201ENST00000311637 AIMP1Q12904 312 aaKnown RBP12.16□□□□□ -0.46
ATP9A-201ENST00000311637 DDX58O95786 925 aaKnown RBP12.16□□□□□ -0.46
ATP9A-201ENST00000311637 ATP2B2Q01814 1243 aa12.15□□□□□ -0.46
ATP9A-201ENST00000311637 SMARCA2P51531 1590 aa12.15□□□□□ -0.46
ATP9A-201ENST00000311637 TPM2P07951 284 aa12.15□□□□□ -0.46
ATP9A-201ENST00000311637 RILPL2Q969X0 211 aa12.15□□□□□ -0.46
ATP9A-201ENST00000311637 ERICH2A1L162 156 aa12.15□□□□□ -0.46
ATP9A-201ENST00000311637 CHMP4BP1P59074 171 aa12.15□□□□□ -0.46
ATP9A-201ENST00000311637 H3BQV1 296 aa12.15□□□□□ -0.47
ATP9A-201ENST00000311637 IFFO2Q5TF58 517 aa12.15□□□□□ -0.47
ATP9A-201ENST00000311637 DDX54Q8TDD1 881 aaKnown RBP12.15□□□□□ -0.47
ATP9A-201ENST00000311637 NFXL1Q6ZNB6 911 aa12.14□□□□□ -0.47
ATP9A-201ENST00000311637 TOM1L2Q6ZVM7 507 aa12.14□□□□□ -0.47
ATP9A-201ENST00000311637 KIF6Q6ZMV9 814 aa12.14□□□□□ -0.47
ATP9A-201ENST00000311637 PCMTD1Q96MG8 357 aaPredicted RBP12.14□□□□□ -0.47
ATP9A-201ENST00000311637 FAM184AQ8NB25 1140 aa12.13□□□□□ -0.47
ATP9A-201ENST00000311637 TPM3P06753 285 aa12.13□□□□□ -0.47
ATP9A-201ENST00000311637 TRIM29Q14134 588 aa12.13□□□□□ -0.47
ATP9A-201ENST00000311637 KIF16BQ96L93 1317 aa12.13□□□□□ -0.47
ATP9A-201ENST00000311637 GPRASP1Q5JY77 1395 aa12.13□□□□□ -0.47
ATP9A-201ENST00000311637 RIC3Q7Z5B4 369 aa12.12□□□□□ -0.47
ATP9A-201ENST00000311637 CLUAP1Q96AJ1 413 aa12.12□□□□□ -0.47
ATP9A-201ENST00000311637 KIF3AQ9Y496 699 aa12.12□□□□□ -0.47
ATP9A-201ENST00000311637 TSR1Q2NL82 804 aaKnown RBP12.12□□□□□ -0.47
ATP9A-201ENST00000311637 CEP162Q5TB80 1403 aa12.12□□□□□ -0.47
ATP9A-201ENST00000311637 ODF2Q5BJF6 829 aa12.12□□□□□ -0.47
ATP9A-201ENST00000311637 TXNDC2Q86VQ3 553 aa12.11□□□□□ -0.47
ATP9A-201ENST00000311637 ADAMTS2O95450 1211 aa12.11□□□□□ -0.47
ATP9A-201ENST00000311637 TRDNQ13061 729 aa12.11□□□□□ -0.47
ATP9A-201ENST00000311637 EVC2Q86UK5 1308 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms