RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 PREX2Q70Z35 1606 aa25.66■■□□□ 1.7
HERPUD2-201ENST00000311350 ARHGEF40Q8TER5 1519 aa25.65■■□□□ 1.7
HERPUD2-201ENST00000311350 PRKRIP1Q9H875 184 aaPredicted RBP25.64■■□□□ 1.7
HERPUD2-201ENST00000311350 CDC42BPBQ9Y5S2 1711 aa25.64■■□□□ 1.7
HERPUD2-201ENST00000311350 MAGI2Q86UL8 1455 aa25.64■■□□□ 1.69
HERPUD2-201ENST00000311350 ZFYVE16Q7Z3T8 1539 aa25.61■■□□□ 1.69
HERPUD2-201ENST00000311350 ZNF518AQ6AHZ1 1483 aa25.6■■□□□ 1.69
HERPUD2-201ENST00000311350 YEATS2Q9ULM3 1422 aa25.6■■□□□ 1.69
HERPUD2-201ENST00000311350 IL27Q8NEV9 243 aa25.6■■□□□ 1.69
HERPUD2-201ENST00000311350 GPATCH8Q9UKJ3 1502 aaKnown RBP25.6■■□□□ 1.69
HERPUD2-201ENST00000311350 CDC42BPAQ5VT25 1732 aa25.59■■□□□ 1.69
HERPUD2-201ENST00000311350 ZBED9Q6R2W3 1325 aa25.59■■□□□ 1.69
HERPUD2-201ENST00000311350 ADGRL2O95490 1459 aa25.59■■□□□ 1.69
HERPUD2-201ENST00000311350 ARID4BQ4LE39 1312 aaPredicted RBP25.58■■□□□ 1.69
HERPUD2-201ENST00000311350 NBPF8Q3BBV2 869 aa25.58■■□□□ 1.69
HERPUD2-201ENST00000311350 AFAP1Q8N556 730 aa25.58■■□□□ 1.69
HERPUD2-201ENST00000311350 ADGBQ8N7X0 1667 aa25.57■■□□□ 1.68
HERPUD2-201ENST00000311350 ITSN2Q9NZM3 1697 aa25.57■■□□□ 1.68
HERPUD2-201ENST00000311350 MBD5Q9P267 1494 aa25.57■■□□□ 1.68
HERPUD2-201ENST00000311350 C11orf95C9JLR9 678 aaPredicted RBP25.57■■□□□ 1.68
HERPUD2-201ENST00000311350 PZPP20742 1482 aa25.57■■□□□ 1.68
HERPUD2-201ENST00000311350 RTN4Q9NQC3 1192 aaKnown RBP25.57■■□□□ 1.68
HERPUD2-201ENST00000311350 ABCC1P33527 1531 aa25.56■■□□□ 1.68
HERPUD2-201ENST00000311350 CCDC136Q96JN2 1154 aa25.56■■□□□ 1.68
HERPUD2-201ENST00000311350 ZNF777Q9ULD5 760 aaPredicted RBP25.55■■□□□ 1.68
HERPUD2-201ENST00000311350 IPO9Q96P70 1041 aaKnown RBP25.54■■□□□ 1.68
HERPUD2-201ENST00000311350 ARHGEF12Q9NZN5 1544 aa25.54■■□□□ 1.68
HERPUD2-201ENST00000311350 KDM5CP41229 1560 aa25.54■■□□□ 1.68
HERPUD2-201ENST00000311350 MRS2Q9HD23 443 aa25.54■■□□□ 1.68
HERPUD2-201ENST00000311350 CFDP1Q9UEE9 299 aaPredicted RBP25.54■■□□□ 1.68
HERPUD2-201ENST00000311350 SLC4A1APQ9BWU0 796 aaKnown RBP25.53■■□□□ 1.68
HERPUD2-201ENST00000311350 KIF7Q2M1P5 1343 aa25.53■■□□□ 1.68
HERPUD2-201ENST00000311350 FOXD1Q16676 465 aa25.52■■□□□ 1.68
HERPUD2-201ENST00000311350 RTL5Q5HYW3 569 aaPredicted RBP25.52■■□□□ 1.68
HERPUD2-201ENST00000311350 CAMSAP2Q08AD1 1489 aa25.52■■□□□ 1.68
HERPUD2-201ENST00000311350 TRAPPC8Q9Y2L5 1435 aa25.52■■□□□ 1.68
HERPUD2-201ENST00000311350 CROCC2H7BZ55 1655 aa25.5■■□□□ 1.67
HERPUD2-201ENST00000311350 KIAA1107Q9UPP5 1409 aa25.49■■□□□ 1.67
HERPUD2-201ENST00000311350 SAMD9LQ8IVG5 1584 aa25.49■■□□□ 1.67
HERPUD2-201ENST00000311350 ANP32AP39687 249 aaKnown RBP25.49■■□□□ 1.67
HERPUD2-201ENST00000311350 ATP10AO60312 1499 aa25.49■■□□□ 1.67
HERPUD2-201ENST00000311350 ZBTB47Q9UFB7 747 aaPredicted RBP25.48■■□□□ 1.67
HERPUD2-201ENST00000311350 ADAMTSL3P82987 1691 aa25.48■■□□□ 1.67
HERPUD2-201ENST00000311350 BCORL1Q5H9F3 1711 aa25.48■■□□□ 1.67
HERPUD2-201ENST00000311350 HECW2Q9P2P5 1572 aa25.47■■□□□ 1.67
HERPUD2-201ENST00000311350 MLH3Q9UHC1 1453 aa25.47■■□□□ 1.67
HERPUD2-201ENST00000311350 ZNF644Q9H582 1327 aaPredicted RBP25.46■■□□□ 1.67
HERPUD2-201ENST00000311350 C9orf84Q5VXU9 1444 aa25.46■■□□□ 1.67
HERPUD2-201ENST00000311350 SYCP2Q9BX26 1530 aa25.45■■□□□ 1.66
HERPUD2-201ENST00000311350 PLEKHH2Q8IVE3 1493 aa25.45■■□□□ 1.66
HERPUD2-201ENST00000311350 SENP3-EIF4A1A0A087X0R7 540 aa25.44■■□□□ 1.66
HERPUD2-201ENST00000311350 HNRNPMP52272 730 aaKnown RBP eCLIP25.44■■□□□ 1.662e-6■■■■■ 28.7
HERPUD2-201ENST00000311350 SIGLEC1Q9BZZ2 1709 aa25.43■■□□□ 1.66
HERPUD2-201ENST00000311350 UHRF1BP1Q6BDS2 1440 aa25.42■■□□□ 1.66
HERPUD2-201ENST00000311350 DHX29Q7Z478 1369 aaKnown RBP25.42■■□□□ 1.66
HERPUD2-201ENST00000311350 PTPRMP28827 1452 aa25.4■■□□□ 1.66
HERPUD2-201ENST00000311350 SHANK2Q9UPX8 1470 aa25.4■■□□□ 1.66
HERPUD2-201ENST00000311350 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.4■■□□□ 1.66
HERPUD2-201ENST00000311350 ANKRD30AQ9BXX3 1397 aa25.4■■□□□ 1.66
HERPUD2-201ENST00000311350 DIP2CQ9Y2E4 1556 aa25.4■■□□□ 1.66
HERPUD2-201ENST00000311350 MADDQ8WXG6 1647 aa25.4■■□□□ 1.66
HERPUD2-201ENST00000311350 SMG6Q86US8 1419 aaKnown RBP25.39■■□□□ 1.65
HERPUD2-201ENST00000311350 MLECQ14165 292 aa25.38■■□□□ 1.65
HERPUD2-201ENST00000311350 CNGB1Q14028 1251 aaPredicted RBP25.38■■□□□ 1.65
HERPUD2-201ENST00000311350 ROCK2O75116 1388 aaKnown RBP25.37■■□□□ 1.65
HERPUD2-201ENST00000311350 SPAG9O60271 1321 aaKnown RBP25.37■■□□□ 1.65
HERPUD2-201ENST00000311350 KDM5DQ9BY66 1539 aa25.37■■□□□ 1.65
HERPUD2-201ENST00000311350 ABCA6Q8N139 1617 aa25.37■■□□□ 1.65
HERPUD2-201ENST00000311350 USP47Q96K76 1375 aa25.37■■□□□ 1.65
HERPUD2-201ENST00000311350 RALGAPBQ86X10 1494 aa25.35■■□□□ 1.65
HERPUD2-201ENST00000311350 REREQ9P2R6 1566 aa25.35■■□□□ 1.65
HERPUD2-201ENST00000311350 KIDINS220Q9ULH0 1771 aa25.34■■□□□ 1.65
HERPUD2-201ENST00000311350 NPM2Q86SE8 214 aaKnown RBP25.34■■□□□ 1.65
HERPUD2-201ENST00000311350 LAS1LQ9Y4W2 734 aaKnown RBP25.32■■□□□ 1.64
HERPUD2-201ENST00000311350 ANKRD50Q9ULJ7 1429 aa25.31■■□□□ 1.64
HERPUD2-201ENST00000311350 RNF123Q5XPI4 1314 aa25.3■■□□□ 1.64
HERPUD2-201ENST00000311350 RIMS1Q86UR5 1692 aaKnown RBP25.3■■□□□ 1.64
HERPUD2-201ENST00000311350 ATP7AQ04656 1500 aa25.29■■□□□ 1.64
HERPUD2-201ENST00000311350 AGLP35573 1532 aa25.28■■□□□ 1.64
HERPUD2-201ENST00000311350 PKD2Q13563 968 aa25.27■■□□□ 1.64
HERPUD2-201ENST00000311350 INO80Q9ULG1 1556 aaPredicted RBP25.26■■□□□ 1.63
HERPUD2-201ENST00000311350 NUDCQ9Y266 331 aa25.26■■□□□ 1.63
HERPUD2-201ENST00000311350 KTN1Q86UP2 1357 aaKnown RBP25.26■■□□□ 1.63
HERPUD2-201ENST00000311350 NEFMP07197 916 aa25.25■■□□□ 1.63
HERPUD2-201ENST00000311350 FER1L4A9Z1Z3 1794 aa25.24■■□□□ 1.63
HERPUD2-201ENST00000311350 RSPH4AQ5TD94 716 aa25.23■■□□□ 1.63
HERPUD2-201ENST00000311350 CCDC141Q6ZP82 1450 aa25.23■■□□□ 1.63
HERPUD2-201ENST00000311350 ARHGEF5Q12774 1597 aa25.22■■□□□ 1.63
HERPUD2-201ENST00000311350 PLPPR3Q6T4P5 718 aa25.21■■□□□ 1.63
HERPUD2-201ENST00000311350 RTEL1-TNFRSF6BF6WH68 1400 aa25.21■■□□□ 1.63
HERPUD2-201ENST00000311350 A2MP01023 1474 aa25.2■■□□□ 1.62
HERPUD2-201ENST00000311350 KIF15Q9NS87 1388 aa25.19■■□□□ 1.62
HERPUD2-201ENST00000311350 NUP155O75694 1391 aa25.16■■□□□ 1.62
HERPUD2-201ENST00000311350 PLXNC1O60486 1568 aa25.16■■□□□ 1.62
HERPUD2-201ENST00000311350 PNISRQ8TF01 805 aaKnown RBP25.15■■□□□ 1.62
HERPUD2-201ENST00000311350 LRPPRCP42704 1394 aaKnown RBP25.15■■□□□ 1.62
HERPUD2-201ENST00000311350 ESF1Q9H501 851 aaKnown RBP25.14■■□□□ 1.62
HERPUD2-201ENST00000311350 BRD4O60885 1362 aaPredicted RBP25.14■■□□□ 1.62
HERPUD2-201ENST00000311350 TSPY4P0CV99 314 aa25.13■■□□□ 1.61
HERPUD2-201ENST00000311350 TSPY10P0CW01 314 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms