RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 BRPF3Q9ULD4 1205 aa17.81■□□□□ 0.44
NPAS4-201ENST00000311034 C20orf194Q5TEA3 1177 aa17.81■□□□□ 0.44
NPAS4-201ENST00000311034 ANKRD30AQ9BXX3 1397 aa17.81■□□□□ 0.44
NPAS4-201ENST00000311034 EIF5BO60841 1220 aaKnown RBP17.8■□□□□ 0.44
NPAS4-201ENST00000311034 ANKRD50Q9ULJ7 1429 aa17.78■□□□□ 0.44
NPAS4-201ENST00000311034 ARID4BQ4LE39 1312 aaPredicted RBP17.77■□□□□ 0.44
NPAS4-201ENST00000311034 NUP153P49790 1475 aaKnown RBP17.77■□□□□ 0.44
NPAS4-201ENST00000311034 DDRGK1Q96HY6 314 aa17.77■□□□□ 0.44
NPAS4-201ENST00000311034 CAMSAP2Q08AD1 1489 aa17.77■□□□□ 0.43
NPAS4-201ENST00000311034 PANK3Q9H999 370 aa17.76■□□□□ 0.43
NPAS4-201ENST00000311034 DNMT1P26358 1616 aaKnown RBP17.75■□□□□ 0.43
NPAS4-201ENST00000311034 MS4A1P11836 297 aa17.75■□□□□ 0.43
NPAS4-201ENST00000311034 SPRYD3Q8NCJ5 442 aa17.75■□□□□ 0.43
NPAS4-201ENST00000311034 LRPPRCP42704 1394 aaKnown RBP17.75■□□□□ 0.43
NPAS4-201ENST00000311034 WDR43Q15061 677 aaKnown RBP eCLIP17.75■□□□□ 0.43
NPAS4-201ENST00000311034 PDE3BQ13370 1112 aa17.74■□□□□ 0.43
NPAS4-201ENST00000311034 TARBP1Q13395 1621 aaKnown RBP17.74■□□□□ 0.43
NPAS4-201ENST00000311034 KIF21AQ7Z4S6 1674 aa17.74■□□□□ 0.43
NPAS4-201ENST00000311034 NUTM2DQ5VT03 806 aaPredicted RBP17.74■□□□□ 0.43
NPAS4-201ENST00000311034 ZNF608Q9ULD9 1512 aaPredicted RBP17.74■□□□□ 0.43
NPAS4-201ENST00000311034 NFKBIBQ15653 356 aa17.73■□□□□ 0.43
NPAS4-201ENST00000311034 FRAT1Q92837 279 aaPredicted RBP17.73■□□□□ 0.43
NPAS4-201ENST00000311034 SAFB2Q14151 953 aaKnown RBP eCLIP17.73■□□□□ 0.43
NPAS4-201ENST00000311034 USP35Q9P2H5 1018 aa17.72■□□□□ 0.43
NPAS4-201ENST00000311034 PLB1Q6P1J6 1458 aa17.71■□□□□ 0.43
NPAS4-201ENST00000311034 KDM5CP41229 1560 aa17.71■□□□□ 0.43
NPAS4-201ENST00000311034 GSE1Q14687 1217 aa17.71■□□□□ 0.43
NPAS4-201ENST00000311034 TROQ12816 1431 aaPredicted RBP17.7■□□□□ 0.42
NPAS4-201ENST00000311034 ADAMTS8Q9UP79 889 aa17.7■□□□□ 0.42
NPAS4-201ENST00000311034 ADAMTS12P58397 1594 aa17.69■□□□□ 0.42
NPAS4-201ENST00000311034 DISP1Q96F81 1524 aa17.69■□□□□ 0.42
NPAS4-201ENST00000311034 MBD5Q9P267 1494 aa17.69■□□□□ 0.42
NPAS4-201ENST00000311034 JPH4Q96JJ6 628 aa17.68■□□□□ 0.42
NPAS4-201ENST00000311034 GPATCH8Q9UKJ3 1502 aaKnown RBP17.68■□□□□ 0.42
NPAS4-201ENST00000311034 KIF14Q15058 1648 aa17.68■□□□□ 0.42
NPAS4-201ENST00000311034 POLR1AO95602 1720 aaPredicted RBP17.68■□□□□ 0.42
NPAS4-201ENST00000311034 RALGAPBQ86X10 1494 aa17.67■□□□□ 0.42
NPAS4-201ENST00000311034 RRP7AQ9Y3A4 280 aaKnown RBP17.67■□□□□ 0.42
NPAS4-201ENST00000311034 PBRM1Q86U86 1689 aa17.67■□□□□ 0.42
NPAS4-201ENST00000311034 BCL2L13Q9BXK5 485 aa17.67■□□□□ 0.42
NPAS4-201ENST00000311034 KIAA0586Q9BVV6 1533 aa17.66■□□□□ 0.42
NPAS4-201ENST00000311034 KNSTRNQ9Y448 316 aa17.66■□□□□ 0.42
NPAS4-201ENST00000311034 FRAT2O75474 233 aaPredicted RBP17.64■□□□□ 0.41
NPAS4-201ENST00000311034 CLUAP1Q96AJ1 413 aa17.64■□□□□ 0.41
NPAS4-201ENST00000311034 C9orf84Q5VXU9 1444 aa17.63■□□□□ 0.41
NPAS4-201ENST00000311034 TMF1P82094 1093 aa17.63■□□□□ 0.41
NPAS4-201ENST00000311034 KIAA0556O60303 1618 aa17.63■□□□□ 0.41
NPAS4-201ENST00000311034 RAPGEF6Q8TEU7 1601 aa17.63■□□□□ 0.41
NPAS4-201ENST00000311034 DISP3Q9P2K9 1392 aa17.62■□□□□ 0.41
NPAS4-201ENST00000311034 PARD3Q8TEW0 1356 aa17.62■□□□□ 0.41
NPAS4-201ENST00000311034 PER1O15534 1290 aaPredicted RBP17.62■□□□□ 0.41
NPAS4-201ENST00000311034 FAM161AQ3B820 660 aa17.62■□□□□ 0.41
NPAS4-201ENST00000311034 CCDC144AA2RUR9 1427 aa17.61■□□□□ 0.41
NPAS4-201ENST00000311034 PLPPR3Q6T4P5 718 aa17.61■□□□□ 0.41
NPAS4-201ENST00000311034 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.6■□□□□ 0.41
NPAS4-201ENST00000311034 CENPQQ7L2Z9 268 aaPredicted RBP17.6■□□□□ 0.41
NPAS4-201ENST00000311034 SLKQ9H2G2 1235 aaPredicted RBP17.59■□□□□ 0.41
NPAS4-201ENST00000311034 UHRF1BP1Q6BDS2 1440 aa17.58■□□□□ 0.41
NPAS4-201ENST00000311034 GOLGA2Q08379 1002 aa17.58■□□□□ 0.41
NPAS4-201ENST00000311034 MRC2Q9UBG0 1479 aa17.58■□□□□ 0.4
NPAS4-201ENST00000311034 WASHC2CQ9Y4E1 1318 aa17.56■□□□□ 0.4
NPAS4-201ENST00000311034 GRIN2AQ12879 1464 aa17.56■□□□□ 0.4
NPAS4-201ENST00000311034 BCAR3O75815 825 aa17.55■□□□□ 0.4
NPAS4-201ENST00000311034 APAF1O14727 1248 aa17.54■□□□□ 0.4
NPAS4-201ENST00000311034 C8orf34Q49A92 452 aa17.54■□□□□ 0.4
NPAS4-201ENST00000311034 PPP2R1AP30153 589 aa17.53■□□□□ 0.4
NPAS4-201ENST00000311034 DUSP27Q5VZP5 1158 aa17.53■□□□□ 0.4
NPAS4-201ENST00000311034 ADGRL2O95490 1459 aa17.53■□□□□ 0.4
NPAS4-201ENST00000311034 PLEKHH1Q9ULM0 1364 aa17.53■□□□□ 0.4
NPAS4-201ENST00000311034 TESK2Q96S53 571 aa17.52■□□□□ 0.4
NPAS4-201ENST00000311034 CARMIL2Q6F5E8 1435 aa17.52■□□□□ 0.39
NPAS4-201ENST00000311034 IFT140Q96RY7 1462 aa17.51■□□□□ 0.39
NPAS4-201ENST00000311034 PLEKHG5O94827 1062 aa17.51■□□□□ 0.39
NPAS4-201ENST00000311034 ERBINQ96RT1 1412 aa17.51■□□□□ 0.39
NPAS4-201ENST00000311034 PRAG1Q86YV5 1406 aa17.5■□□□□ 0.39
NPAS4-201ENST00000311034 KDM2BQ8NHM5 1336 aa17.5■□□□□ 0.39
NPAS4-201ENST00000311034 ADGBQ8N7X0 1667 aa17.5■□□□□ 0.39
NPAS4-201ENST00000311034 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
NPAS4-201ENST00000311034 COG6Q9Y2V7 657 aa17.49■□□□□ 0.39
NPAS4-201ENST00000311034 ARHGEF12Q9NZN5 1544 aa17.48■□□□□ 0.39
NPAS4-201ENST00000311034 GZF1Q9H116 711 aaPredicted RBP17.48■□□□□ 0.39
NPAS4-201ENST00000311034 ITSN2Q9NZM3 1697 aa17.48■□□□□ 0.39
NPAS4-201ENST00000311034 PANK1Q8TE04 598 aa17.47■□□□□ 0.39
NPAS4-201ENST00000311034 STK26Q9P289 416 aa17.47■□□□□ 0.39
NPAS4-201ENST00000311034 ERCC6Q03468 1493 aa17.46■□□□□ 0.39
NPAS4-201ENST00000311034 GGT6Q6P531 493 aa17.46■□□□□ 0.39
NPAS4-201ENST00000311034 AFAP1Q8N556 730 aa17.46■□□□□ 0.39
NPAS4-201ENST00000311034 POGKQ9P215 609 aa17.46■□□□□ 0.38
NPAS4-201ENST00000311034 TRAK1Q9UPV9 953 aa17.46■□□□□ 0.38
NPAS4-201ENST00000311034 MAGI1Q96QZ7 1491 aaPredicted RBP17.45■□□□□ 0.38
NPAS4-201ENST00000311034 SLC24A1O60721 1099 aa17.45■□□□□ 0.38
NPAS4-201ENST00000311034 BLMP54132 1417 aaPredicted RBP17.45■□□□□ 0.38
NPAS4-201ENST00000311034 IGHDP01880 384 aa17.45■□□□□ 0.38
NPAS4-201ENST00000311034 U2SURPO15042 1029 aaKnown RBP17.44■□□□□ 0.38
NPAS4-201ENST00000311034 ATP10BO94823 1461 aa17.44■□□□□ 0.38
NPAS4-201ENST00000311034 SEC24BO95487 1268 aa17.43■□□□□ 0.38
NPAS4-201ENST00000311034 SLFN5Q08AF3 891 aa17.43■□□□□ 0.38
NPAS4-201ENST00000311034 COL17A1Q9UMD9 1497 aaPredicted RBP17.42■□□□□ 0.38
NPAS4-201ENST00000311034 KIF3BO15066 747 aa17.42■□□□□ 0.38
NPAS4-201ENST00000311034 FAM135AQ9P2D6 1515 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms