RNA–Protein interactions for RNA: ENST00000310325.9

CTSF-201, Transcript of cathepsin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSF, Length 2,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-201ENST00000310325 USP47Q96K76 1375 aa31.94■■■□□ 2.7
CTSF-201ENST00000310325 SPAG9O60271 1321 aaKnown RBP31.94■■■□□ 2.7
CTSF-201ENST00000310325 PLA2R1Q13018 1463 aa31.92■■■□□ 2.7
CTSF-201ENST00000310325 KIF7Q2M1P5 1343 aa31.9■■■□□ 2.7
CTSF-201ENST00000310325 INO80Q9ULG1 1556 aaPredicted RBP31.89■■■□□ 2.7
CTSF-201ENST00000310325 BCORL1Q5H9F3 1711 aa31.87■■■□□ 2.69
CTSF-201ENST00000310325 AFAP1Q8N556 730 aa31.87■■■□□ 2.69
CTSF-201ENST00000310325 ATP10AO60312 1499 aa31.87■■■□□ 2.69
CTSF-201ENST00000310325 ATP7AQ04656 1500 aa31.86■■■□□ 2.69
CTSF-201ENST00000310325 DCAF11Q8TEB1 546 aa31.85■■■□□ 2.69
CTSF-201ENST00000310325 ADGRL1O94910 1474 aa31.84■■■□□ 2.69
CTSF-201ENST00000310325 KDM2AQ9Y2K7 1162 aa31.83■■■□□ 2.69
CTSF-201ENST00000310325 DEPDC5O75140 1603 aa31.82■■■□□ 2.69
CTSF-201ENST00000310325 TRPM1Q7Z4N2 1603 aa31.79■■■□□ 2.68
CTSF-201ENST00000310325 CARD11Q9BXL7 1154 aa31.79■■■□□ 2.68
CTSF-201ENST00000310325 SCAPERQ9BY12 1400 aa31.79■■■□□ 2.68
CTSF-201ENST00000310325 NPM1P06748 294 aaKnown RBP eCLIP31.78■■■□□ 2.68
CTSF-201ENST00000310325 PRAG1Q86YV5 1406 aa31.77■■■□□ 2.68
CTSF-201ENST00000310325 E9PCH4 1651 aa31.77■■■□□ 2.68
CTSF-201ENST00000310325 ARID4BQ4LE39 1312 aaPredicted RBP31.77■■■□□ 2.68
CTSF-201ENST00000310325 A2MP01023 1474 aa31.76■■■□□ 2.68
CTSF-201ENST00000310325 EIF2AK4Q9P2K8 1649 aaKnown RBP31.74■■■□□ 2.67
CTSF-201ENST00000310325 ROCK2O75116 1388 aaKnown RBP31.71■■■□□ 2.67
CTSF-201ENST00000310325 CFAP74Q9C0B2 1584 aa31.71■■■□□ 2.67
CTSF-201ENST00000310325 PRKRIP1Q9H875 184 aaPredicted RBP31.71■■■□□ 2.67
CTSF-201ENST00000310325 TET3O43151 1660 aa31.7■■■□□ 2.67
CTSF-201ENST00000310325 RGL3Q3MIN7 710 aa31.69■■■□□ 2.66
CTSF-201ENST00000310325 SPHKAPQ2M3C7 1700 aa31.68■■■□□ 2.66
CTSF-201ENST00000310325 VWDEQ8N2E2 1590 aa31.68■■■□□ 2.66
CTSF-201ENST00000310325 LAMC1P11047 1609 aa31.67■■■□□ 2.66
CTSF-201ENST00000310325 TRPM2O94759 1503 aa31.66■■■□□ 2.66
CTSF-201ENST00000310325 KIDINS220Q9ULH0 1771 aa31.66■■■□□ 2.66
CTSF-201ENST00000310325 ZNF518AQ6AHZ1 1483 aa31.65■■■□□ 2.66
CTSF-201ENST00000310325 DHX29Q7Z478 1369 aaKnown RBP31.64■■■□□ 2.66
CTSF-201ENST00000310325 PRDM15P57071 1507 aaPredicted RBP31.64■■■□□ 2.66
CTSF-201ENST00000310325 KANK1Q14678 1352 aa31.63■■■□□ 2.65
CTSF-201ENST00000310325 CEP152O94986 1710 aa31.63■■■□□ 2.65
CTSF-201ENST00000310325 GPRASP1Q5JY77 1395 aa31.63■■■□□ 2.65
CTSF-201ENST00000310325 CD109Q6YHK3 1445 aa31.62■■■□□ 2.65
CTSF-201ENST00000310325 MYT1LQ9UL68 1186 aa31.62■■■□□ 2.65
CTSF-201ENST00000310325 ST20-MTHFSA0A0A6YYL1 179 aa31.61■■■□□ 2.65
CTSF-201ENST00000310325 MROH1Q8NDA8 1641 aa31.61■■■□□ 2.65
CTSF-201ENST00000310325 PTPRTO14522 1441 aa31.6■■■□□ 2.65
CTSF-201ENST00000310325 POLR3GLQ9BT43 218 aa31.58■■■□□ 2.65
CTSF-201ENST00000310325 KIF3BO15066 747 aa31.57■■■□□ 2.64
CTSF-201ENST00000310325 SUPT16HQ9Y5B9 1047 aaKnown RBP31.56■■■□□ 2.64
CTSF-201ENST00000310325 CLTCL1P53675 1640 aa31.56■■■□□ 2.64
CTSF-201ENST00000310325 RNF17Q9BXT8 1623 aaKnown RBP31.54■■■□□ 2.64
CTSF-201ENST00000310325 POGZQ7Z3K3 1410 aa31.54■■■□□ 2.64
CTSF-201ENST00000310325 CCDC184Q52MB2 194 aa31.53■■■□□ 2.64
CTSF-201ENST00000310325 NBPF1Q3BBV0 1214 aa31.53■■■□□ 2.64
CTSF-201ENST00000310325 HNRNPUQ00839 825 aaKnown RBP eCLIP31.5■■■□□ 2.63
CTSF-201ENST00000310325 MADDQ8WXG6 1647 aa31.49■■■□□ 2.63
CTSF-201ENST00000310325 MRS2Q9HD23 443 aa31.49■■■□□ 2.63
CTSF-201ENST00000310325 HECW2Q9P2P5 1572 aa31.48■■■□□ 2.63
CTSF-201ENST00000310325 MLH3Q9UHC1 1453 aa31.47■■■□□ 2.63
CTSF-201ENST00000310325 EFCAB6Q5THR3 1501 aa31.47■■■□□ 2.63
CTSF-201ENST00000310325 NEURL4Q96JN8 1562 aa31.45■■■□□ 2.63
CTSF-201ENST00000310325 NEO1Q92859 1461 aa31.44■■■□□ 2.62
CTSF-201ENST00000310325 LMTK2Q8IWU2 1503 aa31.44■■■□□ 2.62
CTSF-201ENST00000310325 PPRC1Q5VV67 1664 aaKnown RBP31.42■■■□□ 2.62
CTSF-201ENST00000310325 FRMPD1Q5SYB0 1578 aa31.41■■■□□ 2.62
CTSF-201ENST00000310325 STAC3Q96MF2 364 aa31.41■■■□□ 2.62
CTSF-201ENST00000310325 COL17A1Q9UMD9 1497 aaPredicted RBP31.4■■■□□ 2.62
CTSF-201ENST00000310325 ABCA6Q8N139 1617 aa31.38■■■□□ 2.61
CTSF-201ENST00000310325 IQGAP1P46940 1657 aa31.37■■■□□ 2.61
CTSF-201ENST00000310325 FAM9BQ8IZU0 186 aa31.37■■■□□ 2.61
CTSF-201ENST00000310325 KIF1BO60333 1816 aa31.37■■■□□ 2.61
CTSF-201ENST00000310325 MAP3K4Q9Y6R4 1608 aa31.35■■■□□ 2.61
CTSF-201ENST00000310325 TESK2Q96S53 571 aa31.34■■■□□ 2.61
CTSF-201ENST00000310325 UGGT1Q9NYU2 1555 aa31.32■■■□□ 2.6
CTSF-201ENST00000310325 KIAA1210Q9ULL0 1709 aa31.32■■■□□ 2.6
CTSF-201ENST00000310325 KTN1Q86UP2 1357 aaKnown RBP31.31■■■□□ 2.6
CTSF-201ENST00000310325 DISP3Q9P2K9 1392 aa31.29■■■□□ 2.6
CTSF-201ENST00000310325 PELP1Q8IZL8 1130 aaKnown RBP31.29■■■□□ 2.6
CTSF-201ENST00000310325 CNGB1Q14028 1251 aaPredicted RBP31.28■■■□□ 2.6
CTSF-201ENST00000310325 RICTORQ6R327 1708 aa31.28■■■□□ 2.6
CTSF-201ENST00000310325 IFT172Q9UG01 1749 aa31.28■■■□□ 2.6
CTSF-201ENST00000310325 NEFLP07196 543 aa31.27■■■□□ 2.6
CTSF-201ENST00000310325 FKBP8Q14318 412 aa31.27■■■□□ 2.6
CTSF-201ENST00000310325 GLI2P10070 1586 aa31.27■■■□□ 2.6
CTSF-201ENST00000310325 MROH2AA6NES4 1674 aa31.26■■■□□ 2.6
CTSF-201ENST00000310325 MYOM2P54296 1465 aa31.26■■■□□ 2.6
CTSF-201ENST00000310325 RIMBP3CA6NJZ7 1639 aa31.26■■■□□ 2.59
CTSF-201ENST00000310325 RIMBP3BA6NNM3 1639 aa31.26■■■□□ 2.59
CTSF-201ENST00000310325 RIMBP3Q9UFD9 1639 aa31.26■■■□□ 2.59
CTSF-201ENST00000310325 DIP2CQ9Y2E4 1556 aa31.25■■■□□ 2.59
CTSF-201ENST00000310325 TMF1P82094 1093 aa31.24■■■□□ 2.59
CTSF-201ENST00000310325 ZBED9Q6R2W3 1325 aa31.24■■■□□ 2.59
CTSF-201ENST00000310325 SCAF11Q99590 1463 aaKnown RBP31.23■■■□□ 2.59
CTSF-201ENST00000310325 RALBP1Q15311 655 aa31.22■■■□□ 2.59
CTSF-201ENST00000310325 RAPGEF3O95398 923 aa31.22■■■□□ 2.59
CTSF-201ENST00000310325 CYB5RLQ6IPT4 315 aa31.22■■■□□ 2.59
CTSF-201ENST00000310325 ABCC3O15438 1527 aa31.21■■■□□ 2.59
CTSF-201ENST00000310325 NPATQ14207 1427 aa31.2■■■□□ 2.59
CTSF-201ENST00000310325 GGT6Q6P531 493 aa31.19■■■□□ 2.58
CTSF-201ENST00000310325 MYBBP1AQ9BQG0 1328 aaKnown RBP31.19■■■□□ 2.58
CTSF-201ENST00000310325 ADGRB3O60242 1522 aa31.19■■■□□ 2.58
CTSF-201ENST00000310325 CAMSAP1Q5T5Y3 1602 aa31.18■■■□□ 2.58
CTSF-201ENST00000310325 BRD4O60885 1362 aaPredicted RBP31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms