RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 CCDC144AA2RUR9 1427 aa30■■■□□ 2.39
ATG4D-201ENST00000309469 POGZQ7Z3K3 1410 aa30■■■□□ 2.39
ATG4D-201ENST00000309469 NEO1Q92859 1461 aa29.99■■■□□ 2.39
ATG4D-201ENST00000309469 DEPDC5O75140 1603 aa29.97■■■□□ 2.39
ATG4D-201ENST00000309469 UHRF1BP1Q6BDS2 1440 aa29.97■■■□□ 2.39
ATG4D-201ENST00000309469 KIDINS220Q9ULH0 1771 aa29.97■■■□□ 2.39
ATG4D-201ENST00000309469 ATP10AO60312 1499 aa29.97■■■□□ 2.39
ATG4D-201ENST00000309469 KDM5CP41229 1560 aa29.95■■■□□ 2.39
ATG4D-201ENST00000309469 KIF3BO15066 747 aa29.94■■■□□ 2.38
ATG4D-201ENST00000309469 EIF2AK4Q9P2K8 1649 aaKnown RBP29.94■■■□□ 2.38
ATG4D-201ENST00000309469 MLH3Q9UHC1 1453 aa29.93■■■□□ 2.38
ATG4D-201ENST00000309469 ZNF326Q5BKZ1 582 aaKnown RBP29.92■■■□□ 2.38
ATG4D-201ENST00000309469 GLI2P10070 1586 aa29.92■■■□□ 2.38
ATG4D-201ENST00000309469 CENPBP07199 599 aaPredicted RBP29.92■■■□□ 2.38
ATG4D-201ENST00000309469 KANK1Q14678 1352 aa29.92■■■□□ 2.38
ATG4D-201ENST00000309469 MAP3K4Q9Y6R4 1608 aa29.91■■■□□ 2.38
ATG4D-201ENST00000309469 DCAF11Q8TEB1 546 aa29.9■■■□□ 2.38
ATG4D-201ENST00000309469 SPATA31E1Q6ZUB1 1445 aa29.89■■■□□ 2.38
ATG4D-201ENST00000309469 VWDEQ8N2E2 1590 aa29.88■■■□□ 2.37
ATG4D-201ENST00000309469 A2MP01023 1474 aa29.87■■■□□ 2.37
ATG4D-201ENST00000309469 KDM2AQ9Y2K7 1162 aa29.87■■■□□ 2.37
ATG4D-201ENST00000309469 WASHC2AQ641Q2 1341 aa29.86■■■□□ 2.37
ATG4D-201ENST00000309469 YTHDC1Q96MU7 727 aaKnown RBP29.86■■■□□ 2.37
ATG4D-201ENST00000309469 HECW2Q9P2P5 1572 aa29.85■■■□□ 2.37
ATG4D-201ENST00000309469 PRDM15P57071 1507 aaPredicted RBP29.85■■■□□ 2.37
ATG4D-201ENST00000309469 E9PCH4 1651 aa29.85■■■□□ 2.37
ATG4D-201ENST00000309469 RALGAPBQ86X10 1494 aa29.84■■■□□ 2.37
ATG4D-201ENST00000309469 TET3O43151 1660 aa29.83■■■□□ 2.37
ATG4D-201ENST00000309469 RAPGEF3O95398 923 aa29.83■■■□□ 2.37
ATG4D-201ENST00000309469 MROH1Q8NDA8 1641 aa29.82■■■□□ 2.36
ATG4D-201ENST00000309469 FAM69CQ0P6D2 419 aa29.82■■■□□ 2.36
ATG4D-201ENST00000309469 RGL3Q3MIN7 710 aa29.82■■■□□ 2.36
ATG4D-201ENST00000309469 PTPRTO14522 1441 aa29.8■■■□□ 2.36
ATG4D-201ENST00000309469 DIP2BQ9P265 1576 aa29.78■■■□□ 2.36
ATG4D-201ENST00000309469 C11orf95C9JLR9 678 aaPredicted RBP29.77■■■□□ 2.36
ATG4D-201ENST00000309469 TRPM2O94759 1503 aa29.77■■■□□ 2.36
ATG4D-201ENST00000309469 USP47Q96K76 1375 aa29.77■■■□□ 2.36
ATG4D-201ENST00000309469 FRMPD1Q5SYB0 1578 aa29.77■■■□□ 2.36
ATG4D-201ENST00000309469 CCDC7Q96M83 1385 aa29.75■■■□□ 2.35
ATG4D-201ENST00000309469 PRAG1Q86YV5 1406 aa29.74■■■□□ 2.35
ATG4D-201ENST00000309469 ABCA6Q8N139 1617 aa29.74■■■□□ 2.35
ATG4D-201ENST00000309469 RNF17Q9BXT8 1623 aaKnown RBP29.74■■■□□ 2.35
ATG4D-201ENST00000309469 ANP32CO43423 234 aa29.74■■■□□ 2.35
ATG4D-201ENST00000309469 CARD11Q9BXL7 1154 aa29.73■■■□□ 2.35
ATG4D-201ENST00000309469 SPHKAPQ2M3C7 1700 aa29.72■■■□□ 2.35
ATG4D-201ENST00000309469 RICTORQ6R327 1708 aa29.71■■■□□ 2.35
ATG4D-201ENST00000309469 LMTK2Q8IWU2 1503 aa29.71■■■□□ 2.35
ATG4D-201ENST00000309469 EFCAB6Q5THR3 1501 aa29.68■■■□□ 2.34
ATG4D-201ENST00000309469 BCORL1Q5H9F3 1711 aa29.67■■■□□ 2.34
ATG4D-201ENST00000309469 ROCK2O75116 1388 aaKnown RBP29.67■■■□□ 2.34
ATG4D-201ENST00000309469 KIF7Q2M1P5 1343 aa29.67■■■□□ 2.34
ATG4D-201ENST00000309469 DIP2CQ9Y2E4 1556 aa29.66■■■□□ 2.34
ATG4D-201ENST00000309469 CLTCL1P53675 1640 aa29.65■■■□□ 2.34
ATG4D-201ENST00000309469 TRPM1Q7Z4N2 1603 aa29.65■■■□□ 2.34
ATG4D-201ENST00000309469 GGT6Q6P531 493 aa29.65■■■□□ 2.34
ATG4D-201ENST00000309469 SCAF1Q9H7N4 1312 aaKnown RBP29.64■■■□□ 2.34
ATG4D-201ENST00000309469 CNTLNQ9NXG0 1405 aa29.63■■■□□ 2.33
ATG4D-201ENST00000309469 CCER2I3L3R5 266 aa29.63■■■□□ 2.33
ATG4D-201ENST00000309469 PPRC1Q5VV67 1664 aaKnown RBP29.62■■■□□ 2.33
ATG4D-201ENST00000309469 CEP152O94986 1710 aa29.62■■■□□ 2.33
ATG4D-201ENST00000309469 POLR1AO95602 1720 aaPredicted RBP29.61■■■□□ 2.33
ATG4D-201ENST00000309469 YEATS2Q9ULM3 1422 aa29.6■■■□□ 2.33
ATG4D-201ENST00000309469 GPRASP1Q5JY77 1395 aa29.59■■■□□ 2.33
ATG4D-201ENST00000309469 STAC3Q96MF2 364 aa29.58■■■□□ 2.33
ATG4D-201ENST00000309469 NBPF1Q3BBV0 1214 aa29.57■■■□□ 2.32
ATG4D-201ENST00000309469 ARID4BQ4LE39 1312 aaPredicted RBP29.57■■■□□ 2.32
ATG4D-201ENST00000309469 WASHC2CQ9Y4E1 1318 aa29.57■■■□□ 2.32
ATG4D-201ENST00000309469 ST20-MTHFSA0A0A6YYL1 179 aa29.56■■■□□ 2.32
ATG4D-201ENST00000309469 ZMYM4Q5VZL5 1548 aa29.56■■■□□ 2.32
ATG4D-201ENST00000309469 NEURL4Q96JN8 1562 aa29.55■■■□□ 2.32
ATG4D-201ENST00000309469 ABCC3O15438 1527 aa29.54■■■□□ 2.32
ATG4D-201ENST00000309469 TSPOAP1O95153 1857 aa29.54■■■□□ 2.32
ATG4D-201ENST00000309469 NPATQ14207 1427 aa29.52■■■□□ 2.32
ATG4D-201ENST00000309469 LAMC1P11047 1609 aa29.52■■■□□ 2.32
ATG4D-201ENST00000309469 UGGT1Q9NYU2 1555 aa29.51■■■□□ 2.31
ATG4D-201ENST00000309469 MADDQ8WXG6 1647 aa29.48■■■□□ 2.31
ATG4D-201ENST00000309469 POLR3GLQ9BT43 218 aa29.44■■■□□ 2.3
ATG4D-201ENST00000309469 CAMSAP1Q5T5Y3 1602 aa29.43■■■□□ 2.3
ATG4D-201ENST00000309469 KIF13AQ9H1H9 1805 aa29.43■■■□□ 2.3
ATG4D-201ENST00000309469 KIF1BO60333 1816 aa29.42■■■□□ 2.3
ATG4D-201ENST00000309469 ARHGAP31Q2M1Z3 1444 aa29.39■■■□□ 2.3
ATG4D-201ENST00000309469 NOS1P29475 1434 aa29.39■■■□□ 2.3
ATG4D-201ENST00000309469 ZC3H13Q5T200 1668 aaKnown RBP29.39■■■□□ 2.3
ATG4D-201ENST00000309469 MYOM2P54296 1465 aa29.38■■■□□ 2.29
ATG4D-201ENST00000309469 PRKRIP1Q9H875 184 aaPredicted RBP29.37■■■□□ 2.29
ATG4D-201ENST00000309469 GTF3C3Q9Y5Q9 886 aa29.37■■■□□ 2.29
ATG4D-201ENST00000309469 ADGRB3O60242 1522 aa29.37■■■□□ 2.29
ATG4D-201ENST00000309469 REREQ9P2R6 1566 aa29.36■■■□□ 2.29
ATG4D-201ENST00000309469 MROH2AA6NES4 1674 aa29.34■■■□□ 2.29
ATG4D-201ENST00000309469 COL17A1Q9UMD9 1497 aaPredicted RBP29.34■■■□□ 2.29
ATG4D-201ENST00000309469 CHGAP10645 457 aaKnown RBP29.33■■■□□ 2.29
ATG4D-201ENST00000309469 TESK2Q96S53 571 aa29.33■■■□□ 2.29
ATG4D-201ENST00000309469 AGLP35573 1532 aa29.32■■■□□ 2.28
ATG4D-201ENST00000309469 SIGLEC1Q9BZZ2 1709 aa29.31■■■□□ 2.28
ATG4D-201ENST00000309469 ADGRF5Q8IZF2 1346 aa29.31■■■□□ 2.28
ATG4D-201ENST00000309469 IFT172Q9UG01 1749 aa29.3■■■□□ 2.28
ATG4D-201ENST00000309469 KIAA1210Q9ULL0 1709 aa29.29■■■□□ 2.28
ATG4D-201ENST00000309469 CFAP65Q6ZU64 1925 aaKnown RBP29.29■■■□□ 2.28
ATG4D-201ENST00000309469 SYNMO15061 1565 aa29.28■■■□□ 2.28
ATG4D-201ENST00000309469 SCAF11Q99590 1463 aaKnown RBP29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms