RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 PLIN1O60240 522 aa23.3■■□□□ 1.32
UBXN2A-201ENST00000309033 AMPHP49418 695 aa23.3■■□□□ 1.32
UBXN2A-201ENST00000309033 GORABQ5T7V8 394 aa23.29■■□□□ 1.32
UBXN2A-201ENST00000309033 BCL2L13Q9BXK5 485 aa23.29■■□□□ 1.32
UBXN2A-201ENST00000309033 CCDC144AA2RUR9 1427 aa23.28■■□□□ 1.32
UBXN2A-201ENST00000309033 PDE3BQ13370 1112 aa23.27■■□□□ 1.32
UBXN2A-201ENST00000309033 RSPH4AQ5TD94 716 aa23.27■■□□□ 1.32
UBXN2A-201ENST00000309033 EID1Q9Y6B2 187 aa23.27■■□□□ 1.32
UBXN2A-201ENST00000309033 HMMRO75330 724 aa23.26■■□□□ 1.31
UBXN2A-201ENST00000309033 HSP90B1P14625 803 aaKnown RBP23.26■■□□□ 1.31
UBXN2A-201ENST00000309033 ELL2O00472 640 aaPredicted RBP23.26■■□□□ 1.31
UBXN2A-201ENST00000309033 CCDC9Q9Y3X0 531 aaKnown RBP23.24■■□□□ 1.31
UBXN2A-201ENST00000309033 TAF7LQ5H9L4 462 aa23.24■■□□□ 1.31
UBXN2A-201ENST00000309033 GPATCH3Q96I76 525 aa23.24■■□□□ 1.31
UBXN2A-201ENST00000309033 ARID3AQ99856 593 aa23.23■■□□□ 1.31
UBXN2A-201ENST00000309033 PTMSP20962 102 aa23.23■■□□□ 1.31
UBXN2A-201ENST00000309033 PHLDB1Q86UU1 1377 aa23.22■■□□□ 1.31
UBXN2A-201ENST00000309033 FOXD4L5Q5VV16 416 aaPredicted RBP23.21■■□□□ 1.31
UBXN2A-201ENST00000309033 FOXD4L4Q8WXT5 416 aaPredicted RBP23.21■■□□□ 1.31
UBXN2A-201ENST00000309033 ATAD2BQ9ULI0 1458 aa23.21■■□□□ 1.31
UBXN2A-201ENST00000309033 LMOD3Q0VAK6 560 aa23.21■■□□□ 1.31
UBXN2A-201ENST00000309033 PRKRIP1Q9H875 184 aaPredicted RBP23.2■■□□□ 1.3
UBXN2A-201ENST00000309033 EXOC6Q8TAG9 804 aa23.19■■□□□ 1.3
UBXN2A-201ENST00000309033 GOLGA6L3A6NEY3 463 aa23.19■■□□□ 1.3
UBXN2A-201ENST00000309033 USP47Q96K76 1375 aa23.18■■□□□ 1.3
UBXN2A-201ENST00000309033 KIAA2012Q0VF49 1180 aa23.17■■□□□ 1.3
UBXN2A-201ENST00000309033 AMER1Q5JTC6 1135 aaPredicted RBP23.17■■□□□ 1.3
UBXN2A-201ENST00000309033 SLC4A3P48751 1232 aa23.17■■□□□ 1.3
UBXN2A-201ENST00000309033 SMARCA4P51532 1647 aa23.17■■□□□ 1.3
UBXN2A-201ENST00000309033 SYAP1Q96A49 352 aaPredicted RBP23.16■■□□□ 1.3
UBXN2A-201ENST00000309033 CRBNQ96SW2 442 aa23.16■■□□□ 1.3
UBXN2A-201ENST00000309033 NCBP3Q53F19 620 aaKnown RBP23.15■■□□□ 1.3
UBXN2A-201ENST00000309033 HTATSF1O43719 755 aaKnown RBP23.15■■□□□ 1.3
UBXN2A-201ENST00000309033 CHMP4AQ9BY43 222 aa23.15■■□□□ 1.3
UBXN2A-201ENST00000309033 FANCD2Q9BXW9 1451 aa23.14■■□□□ 1.29
UBXN2A-201ENST00000309033 MINK1Q8N4C8 1332 aaPredicted RBP23.13■■□□□ 1.29
UBXN2A-201ENST00000309033 RRP1P56182 461 aaKnown RBP23.13■■□□□ 1.29
UBXN2A-201ENST00000309033 ANKRD45Q5TZF3 282 aa23.12■■□□□ 1.29
UBXN2A-201ENST00000309033 CGNL1Q0VF96 1302 aa23.11■■□□□ 1.29
UBXN2A-201ENST00000309033 COG6Q9Y2V7 657 aa23.11■■□□□ 1.29
UBXN2A-201ENST00000309033 RILPL2Q969X0 211 aa23.11■■□□□ 1.29
UBXN2A-201ENST00000309033 COG3Q96JB2 828 aa23.11■■□□□ 1.29
UBXN2A-201ENST00000309033 CENPQQ7L2Z9 268 aaPredicted RBP23.1■■□□□ 1.29
UBXN2A-201ENST00000309033 PDE4AP27815 886 aa23.1■■□□□ 1.29
UBXN2A-201ENST00000309033 APAF1O14727 1248 aa23.09■■□□□ 1.29
UBXN2A-201ENST00000309033 HDAC5Q9UQL6 1122 aa23.09■■□□□ 1.29
UBXN2A-201ENST00000309033 EVC2Q86UK5 1308 aa23.09■■□□□ 1.29
UBXN2A-201ENST00000309033 E9PSI1 815 aa23.09■■□□□ 1.29
UBXN2A-201ENST00000309033 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.09■■□□□ 1.29
UBXN2A-201ENST00000309033 PTPRGP23470 1445 aa23.08■■□□□ 1.29
UBXN2A-201ENST00000309033 ST18O60284 1047 aa23.08■■□□□ 1.29
UBXN2A-201ENST00000309033 TOMM22Q9NS69 142 aa23.08■■□□□ 1.29
UBXN2A-201ENST00000309033 UACAQ9BZF9 1416 aa23.08■■□□□ 1.28
UBXN2A-201ENST00000309033 ZKSCAN2Q63HK3 967 aa23.07■■□□□ 1.28
UBXN2A-201ENST00000309033 ZBED9Q6R2W3 1325 aa23.07■■□□□ 1.28
UBXN2A-201ENST00000309033 VGFO15240 615 aaPredicted RBP23.06■■□□□ 1.28
UBXN2A-201ENST00000309033 FAM161AQ3B820 660 aa23.06■■□□□ 1.28
UBXN2A-201ENST00000309033 KIF16BQ96L93 1317 aa23.04■■□□□ 1.28
UBXN2A-201ENST00000309033 TPM4P67936 248 aa23.04■■□□□ 1.28
UBXN2A-201ENST00000309033 FOXD4L6Q3SYB3 417 aaPredicted RBP23.04■■□□□ 1.28
UBXN2A-201ENST00000309033 FOXD4L3Q6VB84 417 aaPredicted RBP23.04■■□□□ 1.28
UBXN2A-201ENST00000309033 CREBRFQ8IUR6 639 aa23.04■■□□□ 1.28
UBXN2A-201ENST00000309033 TMX4Q9H1E5 349 aaPredicted RBP23.03■■□□□ 1.28
UBXN2A-201ENST00000309033 NECTIN2Q92692 538 aa23.02■■□□□ 1.28
UBXN2A-201ENST00000309033 ZNF644Q9H582 1327 aaPredicted RBP23.02■■□□□ 1.28
UBXN2A-201ENST00000309033 NGEFQ8N5V2 710 aa23.02■■□□□ 1.27
UBXN2A-201ENST00000309033 RASSF8Q8NHQ8 419 aa23.02■■□□□ 1.27
UBXN2A-201ENST00000309033 CSPP1Q1MSJ5 1256 aa23.01■■□□□ 1.27
UBXN2A-201ENST00000309033 FRAT2O75474 233 aaPredicted RBP23.01■■□□□ 1.27
UBXN2A-201ENST00000309033 EIF2S2P20042 333 aaKnown RBP23■■□□□ 1.27
UBXN2A-201ENST00000309033 C1orf141Q5JVX7 400 aa23■■□□□ 1.27
UBXN2A-201ENST00000309033 GTF2E1P29083 439 aaPredicted RBP22.98■■□□□ 1.27
UBXN2A-201ENST00000309033 RAD54L2Q9Y4B4 1467 aa22.98■■□□□ 1.27
UBXN2A-201ENST00000309033 G3V3G9 751 aa22.97■■□□□ 1.27
UBXN2A-201ENST00000309033 DCAF8Q5TAQ9 597 aa22.97■■□□□ 1.27
UBXN2A-201ENST00000309033 FGD5Q6ZNL6 1462 aa22.97■■□□□ 1.27
UBXN2A-201ENST00000309033 DIAPH1O60610 1272 aaKnown RBP22.96■■□□□ 1.27
UBXN2A-201ENST00000309033 RIPK4P57078 832 aa22.96■■□□□ 1.27
UBXN2A-201ENST00000309033 CYB5RLQ6IPT4 315 aa22.96■■□□□ 1.27
UBXN2A-201ENST00000309033 TEFQ10587 303 aa22.94■■□□□ 1.26
UBXN2A-201ENST00000309033 SF3A1Q15459 793 aaKnown RBP22.94■■□□□ 1.26
UBXN2A-201ENST00000309033 DDX11L8A8MPP1 907 aa22.94■■□□□ 1.26
UBXN2A-201ENST00000309033 IGF1RP08069 1367 aa22.94■■□□□ 1.26
UBXN2A-201ENST00000309033 H3BQV1 296 aa22.93■■□□□ 1.26
UBXN2A-201ENST00000309033 IFFO2Q5TF58 517 aa22.93■■□□□ 1.26
UBXN2A-201ENST00000309033 NOC3LQ8WTT2 800 aaKnown RBP22.93■■□□□ 1.26
UBXN2A-201ENST00000309033 GAPVD1Q14C86 1478 aa22.93■■□□□ 1.26
UBXN2A-201ENST00000309033 KIF7Q2M1P5 1343 aa22.92■■□□□ 1.26
UBXN2A-201ENST00000309033 FGD6Q6ZV73 1430 aa22.91■■□□□ 1.26
UBXN2A-201ENST00000309033 CCDC34Q96HJ3 373 aa22.91■■□□□ 1.26
UBXN2A-201ENST00000309033 DDX49Q9Y6V7 483 aaKnown RBP22.91■■□□□ 1.26
UBXN2A-201ENST00000309033 PHF14O94880 888 aa22.91■■□□□ 1.26
UBXN2A-201ENST00000309033 PDE4CQ08493 712 aa22.91■■□□□ 1.26
UBXN2A-201ENST00000309033 MYOM3Q5VTT5 1437 aa22.91■■□□□ 1.26
UBXN2A-201ENST00000309033 DZIP1LQ8IYY4 767 aaKnown RBP22.89■■□□□ 1.26
UBXN2A-201ENST00000309033 EVA1CP58658 441 aa22.89■■□□□ 1.26
UBXN2A-201ENST00000309033 DDX19BQ9UMR2 479 aa22.89■■□□□ 1.25
UBXN2A-201ENST00000309033 CCDC7Q96M83 1385 aa22.89■■□□□ 1.25
UBXN2A-201ENST00000309033 PRDM2Q13029 1718 aa22.89■■□□□ 1.25
UBXN2A-201ENST00000309033 C9orf78Q9NZ63 289 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms