RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 FAM50AQ14320 339 aaKnown RBP26.4■■□□□ 1.82
HMGCLL1-202ENST00000308161 RRP7BPQ9NSQ0 103 aa26.4■■□□□ 1.82
HMGCLL1-202ENST00000308161 STRCQ7RTU9 1775 aa26.4■■□□□ 1.82
HMGCLL1-202ENST00000308161 MYO3AQ8NEV4 1616 aa26.4■■□□□ 1.82
HMGCLL1-202ENST00000308161 SHANK2Q9UPX8 1470 aa26.4■■□□□ 1.82
HMGCLL1-202ENST00000308161 DNMT1P26358 1616 aaKnown RBP26.4■■□□□ 1.82
HMGCLL1-202ENST00000308161 CHIC2Q9UKJ5 165 aa26.39■■□□□ 1.82
HMGCLL1-202ENST00000308161 KIF15Q9NS87 1388 aa26.39■■□□□ 1.82
HMGCLL1-202ENST00000308161 DUOX2Q9NRD8 1548 aa26.38■■□□□ 1.81
HMGCLL1-202ENST00000308161 FBXO31Q5XUX0 539 aaPredicted RBP26.38■■□□□ 1.81
HMGCLL1-202ENST00000308161 DMRT2Q9Y5R5 561 aa26.38■■□□□ 1.81
HMGCLL1-202ENST00000308161 FAM135AQ9P2D6 1515 aa26.37■■□□□ 1.81
HMGCLL1-202ENST00000308161 RNF17Q9BXT8 1623 aaKnown RBP26.36■■□□□ 1.81
HMGCLL1-202ENST00000308161 EIF2AK4Q9P2K8 1649 aaKnown RBP26.36■■□□□ 1.81
HMGCLL1-202ENST00000308161 CAMSAP1Q5T5Y3 1602 aa26.35■■□□□ 1.81
HMGCLL1-202ENST00000308161 PPARGC1BQ86YN6 1023 aaKnown RBP26.35■■□□□ 1.81
HMGCLL1-202ENST00000308161 CEP170BQ9Y4F5 1589 aaPredicted RBP26.35■■□□□ 1.81
HMGCLL1-202ENST00000308161 PZPP20742 1482 aa26.34■■□□□ 1.81
HMGCLL1-202ENST00000308161 NCOA1Q15788 1441 aa26.34■■□□□ 1.81
HMGCLL1-202ENST00000308161 TNRQ92752 1358 aa26.33■■□□□ 1.81
HMGCLL1-202ENST00000308161 ZNF142P52746 1687 aaPredicted RBP26.32■■□□□ 1.8
HMGCLL1-202ENST00000308161 ABCC3O15438 1527 aa26.31■■□□□ 1.8
HMGCLL1-202ENST00000308161 ANKRD30AQ9BXX3 1397 aa26.3■■□□□ 1.8
HMGCLL1-202ENST00000308161 MROH1Q8NDA8 1641 aa26.29■■□□□ 1.8
HMGCLL1-202ENST00000308161 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.29■■□□□ 1.8
HMGCLL1-202ENST00000308161 NCKAP5LQ9HCH0 1330 aa26.29■■□□□ 1.8
HMGCLL1-202ENST00000308161 ERBINQ96RT1 1412 aa26.29■■□□□ 1.8
HMGCLL1-202ENST00000308161 FBXO41Q8TF61 875 aa26.28■■□□□ 1.8
HMGCLL1-202ENST00000308161 ZC3H13Q5T200 1668 aaKnown RBP26.27■■□□□ 1.8
HMGCLL1-202ENST00000308161 A2ML1A8K2U0 1454 aa26.27■■□□□ 1.8
HMGCLL1-202ENST00000308161 PTPRTO14522 1441 aa26.26■■□□□ 1.79
HMGCLL1-202ENST00000308161 CEP152O94986 1710 aa26.26■■□□□ 1.79
HMGCLL1-202ENST00000308161 CERKQ8TCT0 537 aa26.25■■□□□ 1.79
HMGCLL1-202ENST00000308161 PLA2R1Q13018 1463 aa26.21■■□□□ 1.79
HMGCLL1-202ENST00000308161 PRDM15P57071 1507 aaPredicted RBP26.2■■□□□ 1.79
HMGCLL1-202ENST00000308161 KANK1Q14678 1352 aa26.19■■□□□ 1.78
HMGCLL1-202ENST00000308161 ADGRL2O95490 1459 aa26.18■■□□□ 1.78
HMGCLL1-202ENST00000308161 PKD2Q13563 968 aa26.18■■□□□ 1.78
HMGCLL1-202ENST00000308161 ERVK-7P63135 1459 aa26.17■■□□□ 1.78
HMGCLL1-202ENST00000308161 NLRP1Q9C000 1473 aa26.17■■□□□ 1.78
HMGCLL1-202ENST00000308161 CFAP65Q6ZU64 1925 aaKnown RBP26.16■■□□□ 1.78
HMGCLL1-202ENST00000308161 ITGAEP38570 1179 aa26.15■■□□□ 1.78
HMGCLL1-202ENST00000308161 DEPDC5O75140 1603 aa26.15■■□□□ 1.78
HMGCLL1-202ENST00000308161 SPATA31D1Q6ZQQ2 1576 aa26.15■■□□□ 1.78
HMGCLL1-202ENST00000308161 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.13■■□□□ 1.77
HMGCLL1-202ENST00000308161 UGGT1Q9NYU2 1555 aa26.13■■□□□ 1.77
HMGCLL1-202ENST00000308161 THEMISQ8N1K5 641 aaPredicted RBP26.12■■□□□ 1.77
HMGCLL1-202ENST00000308161 ANKRD50Q9ULJ7 1429 aa26.11■■□□□ 1.77
HMGCLL1-202ENST00000308161 ZNF335Q9H4Z2 1342 aaPredicted RBP26.08■■□□□ 1.77
HMGCLL1-202ENST00000308161 ARHGAP31Q2M1Z3 1444 aa26.08■■□□□ 1.77
HMGCLL1-202ENST00000308161 ANKLE2Q86XL3 938 aa26.07■■□□□ 1.76
HMGCLL1-202ENST00000308161 POLR1AO95602 1720 aaPredicted RBP26.07■■□□□ 1.76
HMGCLL1-202ENST00000308161 LTBP4Q8N2S1 1624 aa26.06■■□□□ 1.76
HMGCLL1-202ENST00000308161 VWDEQ8N2E2 1590 aa26.03■■□□□ 1.76
HMGCLL1-202ENST00000308161 NEURL4Q96JN8 1562 aa26.03■■□□□ 1.76
HMGCLL1-202ENST00000308161 LMTK2Q8IWU2 1503 aa26.03■■□□□ 1.76
HMGCLL1-202ENST00000308161 ROCK1Q13464 1354 aa26■■□□□ 1.75
HMGCLL1-202ENST00000308161 EFCAB6Q5THR3 1501 aa25.99■■□□□ 1.75
HMGCLL1-202ENST00000308161 UBR1Q8IWV7 1749 aa25.98■■□□□ 1.75
HMGCLL1-202ENST00000308161 STAG3Q9UJ98 1225 aa25.98■■□□□ 1.75
HMGCLL1-202ENST00000308161 NPHP4O75161 1426 aaPredicted RBP25.98■■□□□ 1.75
HMGCLL1-202ENST00000308161 PIK3C2BO00750 1634 aa25.94■■□□□ 1.74
HMGCLL1-202ENST00000308161 UNC13BO14795 1591 aa25.92■■□□□ 1.74
HMGCLL1-202ENST00000308161 SYNMO15061 1565 aa25.92■■□□□ 1.74
HMGCLL1-202ENST00000308161 RRBP1Q9P2E9 1410 aaKnown RBP25.92■■□□□ 1.74
HMGCLL1-202ENST00000308161 IDI1Q13907 227 aa25.91■■□□□ 1.74
HMGCLL1-202ENST00000308161 MED14O60244 1454 aa25.91■■□□□ 1.74
HMGCLL1-202ENST00000308161 IQGAP1P46940 1657 aa25.91■■□□□ 1.74
HMGCLL1-202ENST00000308161 TXNDC2Q86VQ3 553 aa25.9■■□□□ 1.74
HMGCLL1-202ENST00000308161 TET3O43151 1660 aa25.9■■□□□ 1.74
HMGCLL1-202ENST00000308161 NOS1P29475 1434 aa25.9■■□□□ 1.74
HMGCLL1-202ENST00000308161 IQSEC2Q5JU85 1478 aa25.89■■□□□ 1.74
HMGCLL1-202ENST00000308161 SCAF11Q99590 1463 aaKnown RBP25.89■■□□□ 1.74
HMGCLL1-202ENST00000308161 LTKP29376 864 aa25.88■■□□□ 1.73
HMGCLL1-202ENST00000308161 EID1Q9Y6B2 187 aa25.88■■□□□ 1.73
HMGCLL1-202ENST00000308161 RPRD2Q5VT52 1461 aaKnown RBP25.87■■□□□ 1.73
HMGCLL1-202ENST00000308161 NUP155O75694 1391 aa25.87■■□□□ 1.73
HMGCLL1-202ENST00000308161 SLIT1O75093 1534 aa25.86■■□□□ 1.73
HMGCLL1-202ENST00000308161 ARHGAP23Q9P227 1491 aa25.85■■□□□ 1.73
HMGCLL1-202ENST00000308161 GCC2Q8IWJ2 1684 aa25.85■■□□□ 1.73
HMGCLL1-202ENST00000308161 TMEM2Q9UHN6 1383 aa25.84■■□□□ 1.73
HMGCLL1-202ENST00000308161 UBAP1LF5GYI3 381 aa25.84■■□□□ 1.73
HMGCLL1-202ENST00000308161 SLC52A1Q9NWF4 448 aa25.84■■□□□ 1.73
HMGCLL1-202ENST00000308161 IQGAP3Q86VI3 1631 aa25.83■■□□□ 1.73
HMGCLL1-202ENST00000308161 ADGRB3O60242 1522 aa25.82■■□□□ 1.72
HMGCLL1-202ENST00000308161 CPS1P31327 1500 aa25.82■■□□□ 1.72
HMGCLL1-202ENST00000308161 E9PCH4 1651 aa25.8■■□□□ 1.72
HMGCLL1-202ENST00000308161 KDM5AP29375 1690 aaKnown RBP25.78■■□□□ 1.72
HMGCLL1-202ENST00000308161 CHGAP10645 457 aaKnown RBP25.78■■□□□ 1.72
HMGCLL1-202ENST00000308161 SENP3Q9H4L4 574 aaPredicted RBP25.77■■□□□ 1.72
HMGCLL1-202ENST00000308161 BCANQ96GW7 911 aa25.74■■□□□ 1.71
HMGCLL1-202ENST00000308161 NAIPQ13075 1403 aa25.73■■□□□ 1.71
HMGCLL1-202ENST00000308161 SCAF1Q9H7N4 1312 aaKnown RBP25.73■■□□□ 1.71
HMGCLL1-202ENST00000308161 STRCP1A6NGW2 1772 aa25.72■■□□□ 1.71
HMGCLL1-202ENST00000308161 MYO5BQ9ULV0 1848 aa25.71■■□□□ 1.71
HMGCLL1-202ENST00000308161 PPP1R15AO75807 674 aaPredicted RBP25.7■■□□□ 1.71
HMGCLL1-202ENST00000308161 SLC26A8Q96RN1 970 aa25.7■■□□□ 1.71
HMGCLL1-202ENST00000308161 PIP4K2BP78356 416 aa25.69■■□□□ 1.7
HMGCLL1-202ENST00000308161 TMEM131LA2VDJ0 1609 aa25.68■■□□□ 1.7
HMGCLL1-202ENST00000308161 RIMS2Q9UQ26 1411 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms