RNA–Protein interactions for RNA: ENST00000306329.15

MTCL1-201, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MTCL1, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-201ENST00000306329 SF3A1Q15459 793 aaKnown RBP25.4■■□□□ 1.66
MTCL1-201ENST00000306329 LMOD3Q0VAK6 560 aa25.39■■□□□ 1.66
MTCL1-201ENST00000306329 L3MBTL2Q969R5 705 aa25.38■■□□□ 1.65
MTCL1-201ENST00000306329 NUTM2DQ5VT03 806 aaPredicted RBP25.38■■□□□ 1.65
MTCL1-201ENST00000306329 CCDC9Q9Y3X0 531 aaKnown RBP25.38■■□□□ 1.65
MTCL1-201ENST00000306329 DDX11L8A8MPP1 907 aa25.36■■□□□ 1.65
MTCL1-201ENST00000306329 LTV1Q96GA3 475 aaPredicted RBP25.36■■□□□ 1.65
MTCL1-201ENST00000306329 EFCAB2Q5VUJ9 269 aa25.36■■□□□ 1.65
MTCL1-201ENST00000306329 RRP7AQ9Y3A4 280 aaKnown RBP25.36■■□□□ 1.65
MTCL1-201ENST00000306329 KIF3AQ9Y496 699 aa25.36■■□□□ 1.65
MTCL1-201ENST00000306329 AMPHP49418 695 aa25.35■■□□□ 1.65
MTCL1-201ENST00000306329 NGDNQ8NEJ9 315 aaKnown RBP25.35■■□□□ 1.65
MTCL1-201ENST00000306329 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.34■■□□□ 1.65
MTCL1-201ENST00000306329 KIF3BO15066 747 aa25.34■■□□□ 1.65
MTCL1-201ENST00000306329 CARMIL2Q6F5E8 1435 aa25.33■■□□□ 1.65
MTCL1-201ENST00000306329 FMN1Q68DA7 1419 aa25.33■■□□□ 1.65
MTCL1-201ENST00000306329 CEP89Q96ST8 783 aa25.33■■□□□ 1.64
MTCL1-201ENST00000306329 G3V3G9 751 aa25.32■■□□□ 1.64
MTCL1-201ENST00000306329 DCAF8Q5TAQ9 597 aa25.32■■□□□ 1.64
MTCL1-201ENST00000306329 PES1O00541 588 aaKnown RBP25.32■■□□□ 1.64
MTCL1-201ENST00000306329 MARCH6O60337 910 aa25.32■■□□□ 1.64
MTCL1-201ENST00000306329 FRAT2O75474 233 aaPredicted RBP25.32■■□□□ 1.64
MTCL1-201ENST00000306329 RILPL2Q969X0 211 aa25.31■■□□□ 1.64
MTCL1-201ENST00000306329 H3BQV1 296 aa25.31■■□□□ 1.64
MTCL1-201ENST00000306329 IFFO2Q5TF58 517 aa25.31■■□□□ 1.64
MTCL1-201ENST00000306329 BAZ1AQ9NRL2 1556 aaPredicted RBP25.31■■□□□ 1.64
MTCL1-201ENST00000306329 SLC4A3P48751 1232 aa25.3■■□□□ 1.64
MTCL1-201ENST00000306329 VPS53Q5VIR6 699 aa25.3■■□□□ 1.64
MTCL1-201ENST00000306329 DDX49Q9Y6V7 483 aaKnown RBP25.29■■□□□ 1.64
MTCL1-201ENST00000306329 FOXD4L6Q3SYB3 417 aaPredicted RBP25.29■■□□□ 1.64
MTCL1-201ENST00000306329 FOXD4L3Q6VB84 417 aaPredicted RBP25.29■■□□□ 1.64
MTCL1-201ENST00000306329 PHLDB1Q86UU1 1377 aa25.29■■□□□ 1.64
MTCL1-201ENST00000306329 BCL2L13Q9BXK5 485 aa25.28■■□□□ 1.64
MTCL1-201ENST00000306329 ANKRD45Q5TZF3 282 aa25.28■■□□□ 1.64
MTCL1-201ENST00000306329 NACADO15069 1562 aa25.27■■□□□ 1.64
MTCL1-201ENST00000306329 NUTM2FA1L443 756 aa25.27■■□□□ 1.64
MTCL1-201ENST00000306329 TPD52L1Q16890 204 aaPredicted RBP25.27■■□□□ 1.64
MTCL1-201ENST00000306329 CENPQQ7L2Z9 268 aaPredicted RBP25.27■■□□□ 1.64
MTCL1-201ENST00000306329 USP35Q9P2H5 1018 aa25.27■■□□□ 1.64
MTCL1-201ENST00000306329 ELL2O00472 640 aaPredicted RBP25.27■■□□□ 1.64
MTCL1-201ENST00000306329 HNRNPMP52272 730 aaKnown RBP eCLIP25.27■■□□□ 1.643e-6■■■■□ 21.8
MTCL1-201ENST00000306329 FAM161AQ3B820 660 aa25.26■■□□□ 1.63
MTCL1-201ENST00000306329 KIF15Q9NS87 1388 aa25.26■■□□□ 1.63
MTCL1-201ENST00000306329 FAM184AQ8NB25 1140 aa25.26■■□□□ 1.63
MTCL1-201ENST00000306329 PDE4AP27815 886 aa25.25■■□□□ 1.63
MTCL1-201ENST00000306329 HSP90AA2PQ14568 343 aaPredicted RBP25.25■■□□□ 1.63
MTCL1-201ENST00000306329 PLIN1O60240 522 aa25.25■■□□□ 1.63
MTCL1-201ENST00000306329 MYBBP1AQ9BQG0 1328 aaKnown RBP25.25■■□□□ 1.63
MTCL1-201ENST00000306329 GTF2E1P29083 439 aaPredicted RBP25.25■■□□□ 1.63
MTCL1-201ENST00000306329 GOLGA6L19H0YKK7 550 aa25.24■■□□□ 1.63
MTCL1-201ENST00000306329 TRAK1Q9UPV9 953 aa25.24■■□□□ 1.63
MTCL1-201ENST00000306329 CCAR2Q8N163 923 aaKnown RBP25.24■■□□□ 1.63
MTCL1-201ENST00000306329 EID1Q9Y6B2 187 aa25.22■■□□□ 1.63
MTCL1-201ENST00000306329 ANO8Q9HCE9 1232 aaPredicted RBP25.22■■□□□ 1.63
MTCL1-201ENST00000306329 BECN2A8MW95 431 aa25.21■■□□□ 1.63
MTCL1-201ENST00000306329 TSR1Q2NL82 804 aaKnown RBP25.21■■□□□ 1.63
MTCL1-201ENST00000306329 PANK3Q9H999 370 aa25.2■■□□□ 1.62
MTCL1-201ENST00000306329 ATP6V1DQ9Y5K8 247 aa25.2■■□□□ 1.62
MTCL1-201ENST00000306329 EXOC6Q8TAG9 804 aa25.19■■□□□ 1.62
MTCL1-201ENST00000306329 CECR2Q9BXF3 1484 aa25.19■■□□□ 1.62
MTCL1-201ENST00000306329 WASHC2CQ9Y4E1 1318 aa25.19■■□□□ 1.62
MTCL1-201ENST00000306329 SKOR2Q2VWA4 1001 aaPredicted RBP25.19■■□□□ 1.62
MTCL1-201ENST00000306329 ZKSCAN2Q63HK3 967 aa25.18■■□□□ 1.62
MTCL1-201ENST00000306329 GSE1Q14687 1217 aa25.18■■□□□ 1.62
MTCL1-201ENST00000306329 CRBNQ96SW2 442 aa25.17■■□□□ 1.62
MTCL1-201ENST00000306329 AKAP17AQ02040 695 aaKnown RBP25.17■■□□□ 1.62
MTCL1-201ENST00000306329 MCTP1Q6DN14 999 aa25.17■■□□□ 1.62
MTCL1-201ENST00000306329 ST20-MTHFSA0A0A6YYL1 179 aa25.16■■□□□ 1.62
MTCL1-201ENST00000306329 RRP1P56182 461 aaKnown RBP25.16■■□□□ 1.62
MTCL1-201ENST00000306329 ABCC8Q09428 1581 aa25.15■■□□□ 1.62
MTCL1-201ENST00000306329 RSPH6AQ9H0K4 717 aa25.15■■□□□ 1.62
MTCL1-201ENST00000306329 COG6Q9Y2V7 657 aa25.15■■□□□ 1.62
MTCL1-201ENST00000306329 E9PSI1 815 aa25.14■■□□□ 1.62
MTCL1-201ENST00000306329 DIAPH3Q9NSV4 1193 aa25.14■■□□□ 1.62
MTCL1-201ENST00000306329 TPM1P09493 284 aa25.13■■□□□ 1.61
MTCL1-201ENST00000306329 CHMP4CQ96CF2 233 aa25.13■■□□□ 1.61
MTCL1-201ENST00000306329 ZNF592Q92610 1267 aa25.12■■□□□ 1.61
MTCL1-201ENST00000306329 TPM2P07951 284 aa25.11■■□□□ 1.61
MTCL1-201ENST00000306329 TDRD9Q8NDG6 1382 aaKnown RBP25.11■■□□□ 1.61
MTCL1-201ENST00000306329 SETQ01105 290 aaPredicted RBP25.11■■□□□ 1.61
MTCL1-201ENST00000306329 SYNE3Q6ZMZ3 975 aa25.1■■□□□ 1.61
MTCL1-201ENST00000306329 C1orf141Q5JVX7 400 aa25.09■■□□□ 1.61
MTCL1-201ENST00000306329 COG3Q96JB2 828 aa25.08■■□□□ 1.61
MTCL1-201ENST00000306329 CGNL1Q0VF96 1302 aa25.08■■□□□ 1.61
MTCL1-201ENST00000306329 WWC1Q8IX03 1113 aa25.07■■□□□ 1.6
MTCL1-201ENST00000306329 CCDC70Q6NSX1 233 aa25.07■■□□□ 1.6
MTCL1-201ENST00000306329 GPS2Q13227 327 aa25.06■■□□□ 1.6
MTCL1-201ENST00000306329 CCDC88BA6NC98 1476 aa25.06■■□□□ 1.6
MTCL1-201ENST00000306329 NGEFQ8N5V2 710 aa25.05■■□□□ 1.6
MTCL1-201ENST00000306329 CPLX2Q6PUV4 134 aaKnown RBP25.05■■□□□ 1.6
MTCL1-201ENST00000306329 ANO2Q9NQ90 1003 aa25.05■■□□□ 1.6
MTCL1-201ENST00000306329 RUFY2Q8WXA3 655 aa25.05■■□□□ 1.6
MTCL1-201ENST00000306329 FHOD3Q2V2M9 1422 aa25.04■■□□□ 1.6
MTCL1-201ENST00000306329 REC8O95072 547 aa25.04■■□□□ 1.6
MTCL1-201ENST00000306329 TEFQ10587 303 aa25.04■■□□□ 1.6
MTCL1-201ENST00000306329 RSPH4AQ5TD94 716 aa25.04■■□□□ 1.6
MTCL1-201ENST00000306329 PRKRIP1Q9H875 184 aaPredicted RBP25.04■■□□□ 1.6
MTCL1-201ENST00000306329 PCMTD1Q96MG8 357 aaPredicted RBP25.04■■□□□ 1.6
MTCL1-201ENST00000306329 CCDC144AA2RUR9 1427 aa25.04■■□□□ 1.6
MTCL1-201ENST00000306329 ZKSCAN1P17029 563 aaPredicted RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms