RNA–Protein interactions for RNA: ENST00000304672.5

PTCRA-201, Transcript of pre T cell antigen receptor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCRA, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRA-201ENST00000304672 CAMSAP2Q08AD1 1489 aa30.18■■■□□ 2.42
PTCRA-201ENST00000304672 FBXO31Q5XUX0 539 aaPredicted RBP30.17■■■□□ 2.42
PTCRA-201ENST00000304672 KIF3BO15066 747 aa30.16■■■□□ 2.42
PTCRA-201ENST00000304672 NCOA2Q15596 1464 aa30.16■■■□□ 2.42
PTCRA-201ENST00000304672 KDM5DQ9BY66 1539 aa30.16■■■□□ 2.42
PTCRA-201ENST00000304672 POLR1AO95602 1720 aaPredicted RBP30.16■■■□□ 2.42
PTCRA-201ENST00000304672 TNRQ92752 1358 aa30.15■■■□□ 2.42
PTCRA-201ENST00000304672 NEURL4Q96JN8 1562 aa30.14■■■□□ 2.42
PTCRA-201ENST00000304672 PZPP20742 1482 aa30.13■■■□□ 2.41
PTCRA-201ENST00000304672 FAM135AQ9P2D6 1515 aa30.12■■■□□ 2.41
PTCRA-201ENST00000304672 WASHC2CQ9Y4E1 1318 aa30.07■■■□□ 2.4
PTCRA-201ENST00000304672 RSPH4AQ5TD94 716 aa30.06■■■□□ 2.4
PTCRA-201ENST00000304672 ARHGEF5Q12774 1597 aa30.06■■■□□ 2.4
PTCRA-201ENST00000304672 CPS1P31327 1500 aa30.03■■■□□ 2.4
PTCRA-201ENST00000304672 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.03■■■□□ 2.4
PTCRA-201ENST00000304672 SHANK2Q9UPX8 1470 aa30.02■■■□□ 2.4
PTCRA-201ENST00000304672 MIA2Q96PC5 1412 aa30.02■■■□□ 2.4
PTCRA-201ENST00000304672 NLRP1Q9C000 1473 aa29.99■■■□□ 2.39
PTCRA-201ENST00000304672 UGGT1Q9NYU2 1555 aa29.98■■■□□ 2.39
PTCRA-201ENST00000304672 VWDEQ8N2E2 1590 aa29.98■■■□□ 2.39
PTCRA-201ENST00000304672 TSPY4P0CV99 314 aa29.97■■■□□ 2.39
PTCRA-201ENST00000304672 TSPY10P0CW01 314 aa29.97■■■□□ 2.39
PTCRA-201ENST00000304672 ANKLE2Q86XL3 938 aa29.97■■■□□ 2.39
PTCRA-201ENST00000304672 SCAF1Q9H7N4 1312 aaKnown RBP29.96■■■□□ 2.39
PTCRA-201ENST00000304672 RNF17Q9BXT8 1623 aaKnown RBP29.96■■■□□ 2.39
PTCRA-201ENST00000304672 PIP4K2BP78356 416 aa29.96■■■□□ 2.39
PTCRA-201ENST00000304672 THEMISQ8N1K5 641 aaPredicted RBP29.96■■■□□ 2.39
PTCRA-201ENST00000304672 DEPDC5O75140 1603 aa29.95■■■□□ 2.38
PTCRA-201ENST00000304672 HSPA1LP34931 641 aa29.94■■■□□ 2.38
PTCRA-201ENST00000304672 MED14O60244 1454 aa29.93■■■□□ 2.38
PTCRA-201ENST00000304672 NPHP4O75161 1426 aaPredicted RBP29.93■■■□□ 2.38
PTCRA-201ENST00000304672 MAST1Q9Y2H9 1570 aa29.93■■■□□ 2.38
PTCRA-201ENST00000304672 LRRC9Q6ZRR7 1453 aa29.93■■■□□ 2.38
PTCRA-201ENST00000304672 ABCC3O15438 1527 aa29.92■■■□□ 2.38
PTCRA-201ENST00000304672 TOM1O60784 492 aa29.92■■■□□ 2.38
PTCRA-201ENST00000304672 ZC3H13Q5T200 1668 aaKnown RBP29.91■■■□□ 2.38
PTCRA-201ENST00000304672 IQGAP1P46940 1657 aa29.89■■■□□ 2.38
PTCRA-201ENST00000304672 MED1Q15648 1581 aaPredicted RBP29.88■■■□□ 2.37
PTCRA-201ENST00000304672 VPS8Q8N3P4 1428 aa29.88■■■□□ 2.37
PTCRA-201ENST00000304672 MROH1Q8NDA8 1641 aa29.87■■■□□ 2.37
PTCRA-201ENST00000304672 EIF2AK4Q9P2K8 1649 aaKnown RBP29.87■■■□□ 2.37
PTCRA-201ENST00000304672 ALKQ9UM73 1620 aa29.87■■■□□ 2.37
PTCRA-201ENST00000304672 ERVK-7P63135 1459 aa29.85■■■□□ 2.37
PTCRA-201ENST00000304672 STRCP1A6NGW2 1772 aa29.84■■■□□ 2.37
PTCRA-201ENST00000304672 CEP152O94986 1710 aa29.83■■■□□ 2.37
PTCRA-201ENST00000304672 KANK4Q5T7N3 995 aaPredicted RBP29.81■■■□□ 2.36
PTCRA-201ENST00000304672 CFAP65Q6ZU64 1925 aaKnown RBP29.79■■■□□ 2.36
PTCRA-201ENST00000304672 MYOM3Q5VTT5 1437 aa29.79■■■□□ 2.36
PTCRA-201ENST00000304672 UBR1Q8IWV7 1749 aa29.77■■■□□ 2.36
PTCRA-201ENST00000304672 LRRC7Q96NW7 1537 aa29.76■■■□□ 2.36
PTCRA-201ENST00000304672 MAP3K1Q13233 1512 aa29.76■■■□□ 2.35
PTCRA-201ENST00000304672 DUOX2Q9NRD8 1548 aa29.75■■■□□ 2.35
PTCRA-201ENST00000304672 SYNMO15061 1565 aa29.74■■■□□ 2.35
PTCRA-201ENST00000304672 LOC105371045A0A1W2PR82 267 aa29.73■■■□□ 2.35
PTCRA-201ENST00000304672 PRDM15P57071 1507 aaPredicted RBP29.69■■■□□ 2.34
PTCRA-201ENST00000304672 SCAF11Q99590 1463 aaKnown RBP29.68■■■□□ 2.34
PTCRA-201ENST00000304672 CROCC2H7BZ55 1655 aa29.67■■■□□ 2.34
PTCRA-201ENST00000304672 ARHGAP23Q9P227 1491 aa29.67■■■□□ 2.34
PTCRA-201ENST00000304672 KIF15Q9NS87 1388 aa29.66■■■□□ 2.34
PTCRA-201ENST00000304672 SLIT1O75093 1534 aa29.66■■■□□ 2.34
PTCRA-201ENST00000304672 ARHGAP31Q2M1Z3 1444 aa29.65■■■□□ 2.34
PTCRA-201ENST00000304672 SENP3Q9H4L4 574 aaPredicted RBP29.65■■■□□ 2.34
PTCRA-201ENST00000304672 LTKP29376 864 aa29.64■■■□□ 2.34
PTCRA-201ENST00000304672 ABCC5O15440 1437 aa29.62■■■□□ 2.33
PTCRA-201ENST00000304672 ERBINQ96RT1 1412 aa29.62■■■□□ 2.33
PTCRA-201ENST00000304672 XIRP1Q702N8 1843 aaKnown RBP29.6■■■□□ 2.33
PTCRA-201ENST00000304672 TXNDC2Q86VQ3 553 aa29.6■■■□□ 2.33
PTCRA-201ENST00000304672 PHF23Q9BUL5 403 aaPredicted RBP29.6■■■□□ 2.33
PTCRA-201ENST00000304672 RRP7BPQ9NSQ0 103 aa29.6■■■□□ 2.33
PTCRA-201ENST00000304672 PIK3C2BO00750 1634 aa29.6■■■□□ 2.33
PTCRA-201ENST00000304672 PTPN23Q9H3S7 1636 aa29.6■■■□□ 2.33
PTCRA-201ENST00000304672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.56■■■□□ 2.32
PTCRA-201ENST00000304672 DAPK1P53355 1430 aa29.54■■■□□ 2.32
PTCRA-201ENST00000304672 EID1Q9Y6B2 187 aa29.52■■■□□ 2.32
PTCRA-201ENST00000304672 TMEM2Q9UHN6 1383 aa29.52■■■□□ 2.32
PTCRA-201ENST00000304672 KANK1Q14678 1352 aa29.49■■■□□ 2.31
PTCRA-201ENST00000304672 KDM5AP29375 1690 aaKnown RBP29.48■■■□□ 2.31
PTCRA-201ENST00000304672 LMTK2Q8IWU2 1503 aa29.48■■■□□ 2.31
PTCRA-201ENST00000304672 FGD6Q6ZV73 1430 aa29.47■■■□□ 2.31
PTCRA-201ENST00000304672 EFCAB6Q5THR3 1501 aa29.47■■■□□ 2.31
PTCRA-201ENST00000304672 STAG3Q9UJ98 1225 aa29.46■■■□□ 2.31
PTCRA-201ENST00000304672 IDI1Q13907 227 aa29.44■■■□□ 2.3
PTCRA-201ENST00000304672 CHIC2Q9UKJ5 165 aa29.44■■■□□ 2.3
PTCRA-201ENST00000304672 ANKRD30AQ9BXX3 1397 aa29.42■■■□□ 2.3
PTCRA-201ENST00000304672 APLP2Q06481 763 aa29.41■■■□□ 2.3
PTCRA-201ENST00000304672 TET3O43151 1660 aa29.4■■■□□ 2.3
PTCRA-201ENST00000304672 TMEM94Q12767 1356 aa29.39■■■□□ 2.3
PTCRA-201ENST00000304672 RGS17Q9UGC6 210 aaPredicted RBP29.39■■■□□ 2.3
PTCRA-201ENST00000304672 NOS1P29475 1434 aa29.38■■■□□ 2.29
PTCRA-201ENST00000304672 FAM135BQ49AJ0 1406 aa29.38■■■□□ 2.29
PTCRA-201ENST00000304672 ADGRB3O60242 1522 aa29.37■■■□□ 2.29
PTCRA-201ENST00000304672 SLC26A8Q96RN1 970 aa29.37■■■□□ 2.29
PTCRA-201ENST00000304672 KCNA6P17658 529 aa29.36■■■□□ 2.29
PTCRA-201ENST00000304672 RBM33Q96EV2 1170 aaKnown RBP29.33■■■□□ 2.29
PTCRA-201ENST00000304672 ROBO1Q9Y6N7 1651 aa29.33■■■□□ 2.29
PTCRA-201ENST00000304672 ADGRL2O95490 1459 aa29.32■■■□□ 2.28
PTCRA-201ENST00000304672 NWD1Q149M9 1564 aa29.31■■■□□ 2.28
PTCRA-201ENST00000304672 PROSER2Q86WR7 435 aaPredicted RBP29.3■■■□□ 2.28
PTCRA-201ENST00000304672 NKTRP30414 1462 aaKnown RBP29.29■■■□□ 2.28
PTCRA-201ENST00000304672 SLC52A1Q9NWF4 448 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms