RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 NCOA1Q15788 1441 aa26.15■■□□□ 1.78
TRAPPC1-201ENST00000303731 CERKQ8TCT0 537 aa26.12■■□□□ 1.77
TRAPPC1-201ENST00000303731 CAMSAP1Q5T5Y3 1602 aa26.12■■□□□ 1.77
TRAPPC1-201ENST00000303731 CEP170BQ9Y4F5 1589 aaPredicted RBP26.12■■□□□ 1.77
TRAPPC1-201ENST00000303731 EIF2AK4Q9P2K8 1649 aaKnown RBP26.1■■□□□ 1.77
TRAPPC1-201ENST00000303731 RNF17Q9BXT8 1623 aaKnown RBP26.09■■□□□ 1.77
TRAPPC1-201ENST00000303731 PLA2R1Q13018 1463 aa26.09■■□□□ 1.77
TRAPPC1-201ENST00000303731 WASHC2CQ9Y4E1 1318 aa26.09■■□□□ 1.77
TRAPPC1-201ENST00000303731 PZPP20742 1482 aa26.08■■□□□ 1.77
TRAPPC1-201ENST00000303731 PTPN23Q9H3S7 1636 aa26.06■■□□□ 1.76
TRAPPC1-201ENST00000303731 SHANK2Q9UPX8 1470 aa26.06■■□□□ 1.76
TRAPPC1-201ENST00000303731 ZC3H13Q5T200 1668 aaKnown RBP26.06■■□□□ 1.76
TRAPPC1-201ENST00000303731 A2ML1A8K2U0 1454 aa26.04■■□□□ 1.76
TRAPPC1-201ENST00000303731 CROCC2H7BZ55 1655 aa26.04■■□□□ 1.76
TRAPPC1-201ENST00000303731 DUOX2Q9NRD8 1548 aa26.04■■□□□ 1.76
TRAPPC1-201ENST00000303731 PKD2Q13563 968 aa26.03■■□□□ 1.76
TRAPPC1-201ENST00000303731 TNRQ92752 1358 aa26.02■■□□□ 1.76
TRAPPC1-201ENST00000303731 FGD6Q6ZV73 1430 aa26.02■■□□□ 1.76
TRAPPC1-201ENST00000303731 TCOF1Q13428 1488 aaKnown RBP26■■□□□ 1.75
TRAPPC1-201ENST00000303731 DNMT1P26358 1616 aaKnown RBP25.99■■□□□ 1.75
TRAPPC1-201ENST00000303731 ABCC5O15440 1437 aa25.98■■□□□ 1.75
TRAPPC1-201ENST00000303731 ABCC3O15438 1527 aa25.97■■□□□ 1.75
TRAPPC1-201ENST00000303731 ERBINQ96RT1 1412 aa25.97■■□□□ 1.75
TRAPPC1-201ENST00000303731 NLRP1Q9C000 1473 aa25.96■■□□□ 1.75
TRAPPC1-201ENST00000303731 DAPK1P53355 1430 aa25.96■■□□□ 1.75
TRAPPC1-201ENST00000303731 KIF15Q9NS87 1388 aa25.95■■□□□ 1.75
TRAPPC1-201ENST00000303731 FBXO31Q5XUX0 539 aaPredicted RBP25.95■■□□□ 1.74
TRAPPC1-201ENST00000303731 NCKAP5LQ9HCH0 1330 aa25.94■■□□□ 1.74
TRAPPC1-201ENST00000303731 IQSEC2Q5JU85 1478 aa25.94■■□□□ 1.74
TRAPPC1-201ENST00000303731 LTBP4Q8N2S1 1624 aa25.94■■□□□ 1.74
TRAPPC1-201ENST00000303731 MROH1Q8NDA8 1641 aa25.94■■□□□ 1.74
TRAPPC1-201ENST00000303731 PRDM15P57071 1507 aaPredicted RBP25.9■■□□□ 1.74
TRAPPC1-201ENST00000303731 POLR1AO95602 1720 aaPredicted RBP25.9■■□□□ 1.74
TRAPPC1-201ENST00000303731 SPATA31D1Q6ZQQ2 1576 aa25.9■■□□□ 1.74
TRAPPC1-201ENST00000303731 ANKRD30AQ9BXX3 1397 aa25.88■■□□□ 1.73
TRAPPC1-201ENST00000303731 CEP152O94986 1710 aa25.88■■□□□ 1.73
TRAPPC1-201ENST00000303731 UGGT1Q9NYU2 1555 aa25.87■■□□□ 1.73
TRAPPC1-201ENST00000303731 THEMISQ8N1K5 641 aaPredicted RBP25.87■■□□□ 1.73
TRAPPC1-201ENST00000303731 RRP7BPQ9NSQ0 103 aa25.87■■□□□ 1.73
TRAPPC1-201ENST00000303731 DEPDC5O75140 1603 aa25.86■■□□□ 1.73
TRAPPC1-201ENST00000303731 ERVK-7P63135 1459 aa25.85■■□□□ 1.73
TRAPPC1-201ENST00000303731 ARHGAP31Q2M1Z3 1444 aa25.83■■□□□ 1.73
TRAPPC1-201ENST00000303731 KANK1Q14678 1352 aa25.82■■□□□ 1.72
TRAPPC1-201ENST00000303731 ADGRL2O95490 1459 aa25.81■■□□□ 1.72
TRAPPC1-201ENST00000303731 ANKLE2Q86XL3 938 aa25.81■■□□□ 1.72
TRAPPC1-201ENST00000303731 NEURL4Q96JN8 1562 aa25.8■■□□□ 1.72
TRAPPC1-201ENST00000303731 ZNF335Q9H4Z2 1342 aaPredicted RBP25.8■■□□□ 1.72
TRAPPC1-201ENST00000303731 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.79■■□□□ 1.72
TRAPPC1-201ENST00000303731 CHIC2Q9UKJ5 165 aa25.77■■□□□ 1.72
TRAPPC1-201ENST00000303731 CFAP65Q6ZU64 1925 aaKnown RBP25.76■■□□□ 1.72
TRAPPC1-201ENST00000303731 FAM50AQ14320 339 aaKnown RBP25.76■■□□□ 1.71
TRAPPC1-201ENST00000303731 MED14O60244 1454 aa25.76■■□□□ 1.71
TRAPPC1-201ENST00000303731 LMTK2Q8IWU2 1503 aa25.75■■□□□ 1.71
TRAPPC1-201ENST00000303731 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.73■■□□□ 1.719e-8■□□□□ 10.2
TRAPPC1-201ENST00000303731 VWDEQ8N2E2 1590 aa25.73■■□□□ 1.71
TRAPPC1-201ENST00000303731 UBR1Q8IWV7 1749 aa25.72■■□□□ 1.71
TRAPPC1-201ENST00000303731 NPHP4O75161 1426 aaPredicted RBP25.71■■□□□ 1.71
TRAPPC1-201ENST00000303731 CPS1P31327 1500 aa25.71■■□□□ 1.71
TRAPPC1-201ENST00000303731 IQGAP1P46940 1657 aa25.7■■□□□ 1.7
TRAPPC1-201ENST00000303731 ANKRD50Q9ULJ7 1429 aa25.67■■□□□ 1.7
TRAPPC1-201ENST00000303731 KDM5AP29375 1690 aaKnown RBP25.65■■□□□ 1.7
TRAPPC1-201ENST00000303731 EFCAB6Q5THR3 1501 aa25.65■■□□□ 1.7
TRAPPC1-201ENST00000303731 SLIT1O75093 1534 aa25.64■■□□□ 1.7
TRAPPC1-201ENST00000303731 ARHGAP23Q9P227 1491 aa25.63■■□□□ 1.69
TRAPPC1-201ENST00000303731 SCAF11Q99590 1463 aaKnown RBP25.62■■□□□ 1.69
TRAPPC1-201ENST00000303731 RPRD2Q5VT52 1461 aaKnown RBP25.61■■□□□ 1.69
TRAPPC1-201ENST00000303731 ROCK1Q13464 1354 aa25.61■■□□□ 1.69
TRAPPC1-201ENST00000303731 PIK3C2BO00750 1634 aa25.61■■□□□ 1.69
TRAPPC1-201ENST00000303731 UBAP1LF5GYI3 381 aa25.6■■□□□ 1.69
TRAPPC1-201ENST00000303731 NOS1P29475 1434 aa25.58■■□□□ 1.69
TRAPPC1-201ENST00000303731 EID1Q9Y6B2 187 aa25.58■■□□□ 1.69
TRAPPC1-201ENST00000303731 STAG3Q9UJ98 1225 aa25.57■■□□□ 1.68
TRAPPC1-201ENST00000303731 TET3O43151 1660 aa25.56■■□□□ 1.68
TRAPPC1-201ENST00000303731 UNC13BO14795 1591 aa25.56■■□□□ 1.68
TRAPPC1-201ENST00000303731 SYNMO15061 1565 aa25.56■■□□□ 1.68
TRAPPC1-201ENST00000303731 TMEM2Q9UHN6 1383 aa25.55■■□□□ 1.68
TRAPPC1-201ENST00000303731 TXNDC2Q86VQ3 553 aa25.54■■□□□ 1.68
TRAPPC1-201ENST00000303731 SLC52A1Q9NWF4 448 aa25.54■■□□□ 1.68
TRAPPC1-201ENST00000303731 GCC2Q8IWJ2 1684 aa25.53■■□□□ 1.68
TRAPPC1-201ENST00000303731 TOM1O60784 492 aa25.52■■□□□ 1.68
TRAPPC1-201ENST00000303731 IDI1Q13907 227 aa25.52■■□□□ 1.68
TRAPPC1-201ENST00000303731 LTKP29376 864 aa25.51■■□□□ 1.67
TRAPPC1-201ENST00000303731 ADGRB3O60242 1522 aa25.51■■□□□ 1.67
TRAPPC1-201ENST00000303731 STRCP1A6NGW2 1772 aa25.47■■□□□ 1.67
TRAPPC1-201ENST00000303731 IQGAP3Q86VI3 1631 aa25.46■■□□□ 1.67
TRAPPC1-201ENST00000303731 LRRC7Q96NW7 1537 aa25.44■■□□□ 1.66
TRAPPC1-201ENST00000303731 ITGAEP38570 1179 aa25.41■■□□□ 1.66
TRAPPC1-201ENST00000303731 E9PCH4 1651 aa25.41■■□□□ 1.66
TRAPPC1-201ENST00000303731 DISP3Q9P2K9 1392 aa25.41■■□□□ 1.66
TRAPPC1-201ENST00000303731 RRBP1Q9P2E9 1410 aaKnown RBP25.4■■□□□ 1.66
TRAPPC1-201ENST00000303731 PPARGC1BQ86YN6 1023 aaKnown RBP25.4■■□□□ 1.66
TRAPPC1-201ENST00000303731 SCAF1Q9H7N4 1312 aaKnown RBP25.38■■□□□ 1.65
TRAPPC1-201ENST00000303731 HDGFP51858 240 aaKnown RBP25.38■■□□□ 1.65
TRAPPC1-201ENST00000303731 NUP155O75694 1391 aa25.38■■□□□ 1.65
TRAPPC1-201ENST00000303731 PIP4K2BP78356 416 aa25.37■■□□□ 1.65
TRAPPC1-201ENST00000303731 TMEM131LA2VDJ0 1609 aa25.36■■□□□ 1.65
TRAPPC1-201ENST00000303731 MYO5BQ9ULV0 1848 aa25.35■■□□□ 1.65
TRAPPC1-201ENST00000303731 ZFYVE9O95405 1425 aa25.34■■□□□ 1.65
TRAPPC1-201ENST00000303731 ALKQ9UM73 1620 aa25.34■■□□□ 1.65
TRAPPC1-201ENST00000303731 KCNA6P17658 529 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms