RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 INO80Q9ULG1 1556 aaPredicted RBP20.45■□□□□ 0.86
SHCBP1-201ENST00000303383 DHX29Q7Z478 1369 aaKnown RBP20.43■□□□□ 0.86
SHCBP1-201ENST00000303383 KDM2AQ9Y2K7 1162 aa20.43■□□□□ 0.86
SHCBP1-201ENST00000303383 NEO1Q92859 1461 aa20.43■□□□□ 0.86
SHCBP1-201ENST00000303383 IQGAP3Q86VI3 1631 aa20.43■□□□□ 0.86
SHCBP1-201ENST00000303383 POGZQ7Z3K3 1410 aa20.42■□□□□ 0.86
SHCBP1-201ENST00000303383 NBPF8Q3BBV2 869 aa20.42■□□□□ 0.86
SHCBP1-201ENST00000303383 HSPA5P11021 654 aaKnown RBP20.41■□□□□ 0.86
SHCBP1-201ENST00000303383 RAPGEF3O95398 923 aa20.41■□□□□ 0.86
SHCBP1-201ENST00000303383 RGL3Q3MIN7 710 aa20.4■□□□□ 0.86
SHCBP1-201ENST00000303383 DCAF11Q8TEB1 546 aa20.4■□□□□ 0.86
SHCBP1-201ENST00000303383 MAGI2Q86UL8 1455 aa20.39■□□□□ 0.85
SHCBP1-201ENST00000303383 A2MP01023 1474 aa20.36■□□□□ 0.85
SHCBP1-201ENST00000303383 KIDINS220Q9ULH0 1771 aa20.36■□□□□ 0.85
SHCBP1-201ENST00000303383 YTHDC1Q96MU7 727 aaKnown RBP20.35■□□□□ 0.85
SHCBP1-201ENST00000303383 MLH3Q9UHC1 1453 aa20.34■□□□□ 0.85
SHCBP1-201ENST00000303383 GGT6Q6P531 493 aa20.34■□□□□ 0.85
SHCBP1-201ENST00000303383 GLI2P10070 1586 aa20.34■□□□□ 0.85
SHCBP1-201ENST00000303383 HECW2Q9P2P5 1572 aa20.34■□□□□ 0.85
SHCBP1-201ENST00000303383 MAP3K4Q9Y6R4 1608 aa20.33■□□□□ 0.85
SHCBP1-201ENST00000303383 KDM5CP41229 1560 aa20.33■□□□□ 0.84
SHCBP1-201ENST00000303383 CENPBP07199 599 aaPredicted RBP20.32■□□□□ 0.84
SHCBP1-201ENST00000303383 EIF2AK4Q9P2K8 1649 aaKnown RBP20.32■□□□□ 0.84
SHCBP1-201ENST00000303383 PLA2R1Q13018 1463 aa20.29■□□□□ 0.84
SHCBP1-201ENST00000303383 DIP2BQ9P265 1576 aa20.29■□□□□ 0.84
SHCBP1-201ENST00000303383 CARD11Q9BXL7 1154 aa20.29■□□□□ 0.84
SHCBP1-201ENST00000303383 DEPDC5O75140 1603 aa20.28■□□□□ 0.84
SHCBP1-201ENST00000303383 TSPOAP1O95153 1857 aa20.28■□□□□ 0.84
SHCBP1-201ENST00000303383 ANP32CO43423 234 aa20.26■□□□□ 0.83
SHCBP1-201ENST00000303383 ATP10AO60312 1499 aa20.26■□□□□ 0.83
SHCBP1-201ENST00000303383 TET3O43151 1660 aa20.26■□□□□ 0.83
SHCBP1-201ENST00000303383 UHRF1BP1Q6BDS2 1440 aa20.25■□□□□ 0.83
SHCBP1-201ENST00000303383 E9PCH4 1651 aa20.25■□□□□ 0.83
SHCBP1-201ENST00000303383 WASHC2CQ9Y4E1 1318 aa20.25■□□□□ 0.83
SHCBP1-201ENST00000303383 PRDM15P57071 1507 aaPredicted RBP20.25■□□□□ 0.83
SHCBP1-201ENST00000303383 USP47Q96K76 1375 aa20.24■□□□□ 0.83
SHCBP1-201ENST00000303383 ROCK2O75116 1388 aaKnown RBP20.23■□□□□ 0.83
SHCBP1-201ENST00000303383 POLR3GLQ9BT43 218 aa20.22■□□□□ 0.83
SHCBP1-201ENST00000303383 ABCA6Q8N139 1617 aa20.22■□□□□ 0.83
SHCBP1-201ENST00000303383 WASHC2AQ641Q2 1341 aa20.21■□□□□ 0.83
SHCBP1-201ENST00000303383 RALGAPBQ86X10 1494 aa20.21■□□□□ 0.83
SHCBP1-201ENST00000303383 VWDEQ8N2E2 1590 aa20.2■□□□□ 0.82
SHCBP1-201ENST00000303383 RICTORQ6R327 1708 aa20.2■□□□□ 0.82
SHCBP1-201ENST00000303383 TRPM2O94759 1503 aa20.19■□□□□ 0.82
SHCBP1-201ENST00000303383 SPHKAPQ2M3C7 1700 aa20.19■□□□□ 0.82
SHCBP1-201ENST00000303383 MROH1Q8NDA8 1641 aa20.18■□□□□ 0.82
SHCBP1-201ENST00000303383 CHGAP10645 457 aaKnown RBP20.18■□□□□ 0.82
SHCBP1-201ENST00000303383 PTPRTO14522 1441 aa20.17■□□□□ 0.82
SHCBP1-201ENST00000303383 YEATS2Q9ULM3 1422 aa20.17■□□□□ 0.82
SHCBP1-201ENST00000303383 FRMPD1Q5SYB0 1578 aa20.17■□□□□ 0.82
SHCBP1-201ENST00000303383 DIP2CQ9Y2E4 1556 aa20.17■□□□□ 0.82
SHCBP1-201ENST00000303383 PRAG1Q86YV5 1406 aa20.17■□□□□ 0.82
SHCBP1-201ENST00000303383 RNF17Q9BXT8 1623 aaKnown RBP20.17■□□□□ 0.82
SHCBP1-201ENST00000303383 CCDC7Q96M83 1385 aa20.16■□□□□ 0.82
SHCBP1-201ENST00000303383 EFCAB6Q5THR3 1501 aa20.15■□□□□ 0.82
SHCBP1-201ENST00000303383 SPATA31E1Q6ZUB1 1445 aa20.15■□□□□ 0.82
SHCBP1-201ENST00000303383 CEP152O94986 1710 aa20.15■□□□□ 0.82
SHCBP1-201ENST00000303383 C11orf95C9JLR9 678 aaPredicted RBP20.13■□□□□ 0.81
SHCBP1-201ENST00000303383 LMTK2Q8IWU2 1503 aa20.12■□□□□ 0.81
SHCBP1-201ENST00000303383 STAC3Q96MF2 364 aa20.12■□□□□ 0.81
SHCBP1-201ENST00000303383 KIF7Q2M1P5 1343 aa20.12■□□□□ 0.81
SHCBP1-201ENST00000303383 CLTCL1P53675 1640 aa20.11■□□□□ 0.81
SHCBP1-201ENST00000303383 ST20-MTHFSA0A0A6YYL1 179 aa20.11■□□□□ 0.81
SHCBP1-201ENST00000303383 PPRC1Q5VV67 1664 aaKnown RBP20.11■□□□□ 0.81
SHCBP1-201ENST00000303383 NBPF1Q3BBV0 1214 aa20.11■□□□□ 0.81
SHCBP1-201ENST00000303383 CFAP65Q6ZU64 1925 aaKnown RBP20.1■□□□□ 0.81
SHCBP1-201ENST00000303383 ZMYM4Q5VZL5 1548 aa20.08■□□□□ 0.81
SHCBP1-201ENST00000303383 NPATQ14207 1427 aa20.08■□□□□ 0.8
SHCBP1-201ENST00000303383 ABCC3O15438 1527 aa20.07■□□□□ 0.8
SHCBP1-201ENST00000303383 CNTLNQ9NXG0 1405 aa20.07■□□□□ 0.8
SHCBP1-201ENST00000303383 BCORL1Q5H9F3 1711 aa20.07■□□□□ 0.8
SHCBP1-201ENST00000303383 KIF13AQ9H1H9 1805 aa20.06■□□□□ 0.8
SHCBP1-201ENST00000303383 TRPM1Q7Z4N2 1603 aa20.06■□□□□ 0.8
SHCBP1-201ENST00000303383 UGGT1Q9NYU2 1555 aa20.06■□□□□ 0.8
SHCBP1-201ENST00000303383 KIF1BO60333 1816 aa20.05■□□□□ 0.8
SHCBP1-201ENST00000303383 CCER2I3L3R5 266 aa20.04■□□□□ 0.8
SHCBP1-201ENST00000303383 ARID4BQ4LE39 1312 aaPredicted RBP20.04■□□□□ 0.8
SHCBP1-201ENST00000303383 MLECQ14165 292 aa20.04■□□□□ 0.8
SHCBP1-201ENST00000303383 ESF1Q9H501 851 aaKnown RBP20.03■□□□□ 0.8
SHCBP1-201ENST00000303383 TRHP20396 242 aaPredicted RBP20.02■□□□□ 0.8
SHCBP1-201ENST00000303383 CAMSAP1Q5T5Y3 1602 aa20.01■□□□□ 0.79
SHCBP1-201ENST00000303383 GPRASP1Q5JY77 1395 aa20.01■□□□□ 0.79
SHCBP1-201ENST00000303383 POLR1AO95602 1720 aaPredicted RBP20■□□□□ 0.79
SHCBP1-201ENST00000303383 CNGB1Q14028 1251 aaPredicted RBP19.99■□□□□ 0.79
SHCBP1-201ENST00000303383 ZC3H13Q5T200 1668 aaKnown RBP19.98■□□□□ 0.79
SHCBP1-201ENST00000303383 MADDQ8WXG6 1647 aa19.96■□□□□ 0.79
SHCBP1-201ENST00000303383 PPP6R1Q9UPN7 881 aa19.96■□□□□ 0.79
SHCBP1-201ENST00000303383 ARHGAP31Q2M1Z3 1444 aa19.96■□□□□ 0.79
SHCBP1-201ENST00000303383 COL17A1Q9UMD9 1497 aaPredicted RBP19.96■□□□□ 0.79
SHCBP1-201ENST00000303383 NEURL4Q96JN8 1562 aa19.95■□□□□ 0.78
SHCBP1-201ENST00000303383 TMF1P82094 1093 aa19.95■□□□□ 0.78
SHCBP1-201ENST00000303383 SLC52A1Q9NWF4 448 aa19.95■□□□□ 0.78
SHCBP1-201ENST00000303383 STAG3Q9UJ98 1225 aa19.95■□□□□ 0.78
SHCBP1-201ENST00000303383 ADGRF5Q8IZF2 1346 aa19.95■□□□□ 0.78
SHCBP1-201ENST00000303383 LAMC1P11047 1609 aa19.94■□□□□ 0.78
SHCBP1-201ENST00000303383 CFAP70Q5T0N1 1121 aa19.94■□□□□ 0.78
SHCBP1-201ENST00000303383 NOS1P29475 1434 aa19.94■□□□□ 0.78
SHCBP1-201ENST00000303383 PRKCSHP14314 528 aaPredicted RBP19.93■□□□□ 0.78
SHCBP1-201ENST00000303383 RPGRIP1LQ68CZ1 1315 aa19.93■□□□□ 0.78
SHCBP1-201ENST00000303383 EIF3AQ14152 1382 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms