RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 DUOX2Q9NRD8 1548 aa17.7■□□□□ 0.42
CLCC1-201ENST00000302500 PRDM15P57071 1507 aaPredicted RBP17.69■□□□□ 0.42
CLCC1-201ENST00000302500 MYO3AQ8NEV4 1616 aa17.69■□□□□ 0.42
CLCC1-201ENST00000302500 ZC3H13Q5T200 1668 aaKnown RBP17.69■□□□□ 0.42
CLCC1-201ENST00000302500 PPP6R1Q9UPN7 881 aa17.69■□□□□ 0.42
CLCC1-201ENST00000302500 ABCC3O15438 1527 aa17.68■□□□□ 0.42
CLCC1-201ENST00000302500 VWDEQ8N2E2 1590 aa17.67■□□□□ 0.42
CLCC1-201ENST00000302500 PZPP20742 1482 aa17.65■□□□□ 0.42
CLCC1-201ENST00000302500 NCOA1Q15788 1441 aa17.65■□□□□ 0.42
CLCC1-201ENST00000302500 ERBINQ96RT1 1412 aa17.65■□□□□ 0.42
CLCC1-201ENST00000302500 HSPA2P54652 639 aa17.65■□□□□ 0.42
CLCC1-201ENST00000302500 UHRF1BP1Q6BDS2 1440 aa17.64■□□□□ 0.41
CLCC1-201ENST00000302500 CEP152O94986 1710 aa17.64■□□□□ 0.41
CLCC1-201ENST00000302500 TSPY4P0CV99 314 aa17.64■□□□□ 0.41
CLCC1-201ENST00000302500 TSPY10P0CW01 314 aa17.64■□□□□ 0.41
CLCC1-201ENST00000302500 APLP2Q06481 763 aa17.64■□□□□ 0.41
CLCC1-201ENST00000302500 KIF15Q9NS87 1388 aa17.62■□□□□ 0.41
CLCC1-201ENST00000302500 CEP170BQ9Y4F5 1589 aaPredicted RBP17.62■□□□□ 0.41
CLCC1-201ENST00000302500 KIF3BO15066 747 aa17.62■□□□□ 0.41
CLCC1-201ENST00000302500 GGT6Q6P531 493 aa17.62■□□□□ 0.41
CLCC1-201ENST00000302500 CAMSAP1Q5T5Y3 1602 aa17.61■□□□□ 0.41
CLCC1-201ENST00000302500 SPATA31D1Q6ZQQ2 1576 aa17.6■□□□□ 0.41
CLCC1-201ENST00000302500 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.6■□□□□ 0.41
CLCC1-201ENST00000302500 LMTK2Q8IWU2 1503 aa17.59■□□□□ 0.41
CLCC1-201ENST00000302500 PLPPR3Q6T4P5 718 aa17.58■□□□□ 0.4
CLCC1-201ENST00000302500 RRBP1Q9P2E9 1410 aaKnown RBP17.56■□□□□ 0.4
CLCC1-201ENST00000302500 ARHGAP31Q2M1Z3 1444 aa17.56■□□□□ 0.4
CLCC1-201ENST00000302500 PLA2R1Q13018 1463 aa17.55■□□□□ 0.4
CLCC1-201ENST00000302500 A2ML1A8K2U0 1454 aa17.54■□□□□ 0.4
CLCC1-201ENST00000302500 UNC13BO14795 1591 aa17.53■□□□□ 0.4
CLCC1-201ENST00000302500 ERVK-7P63135 1459 aa17.53■□□□□ 0.4
CLCC1-201ENST00000302500 ANKRD30AQ9BXX3 1397 aa17.53■□□□□ 0.4
CLCC1-201ENST00000302500 FBXO31Q5XUX0 539 aaPredicted RBP17.53■□□□□ 0.4
CLCC1-201ENST00000302500 ROCK1Q13464 1354 aa17.52■□□□□ 0.4
CLCC1-201ENST00000302500 ESF1Q9H501 851 aaKnown RBP17.52■□□□□ 0.4
CLCC1-201ENST00000302500 RRP7BPQ9NSQ0 103 aa17.52■□□□□ 0.4
CLCC1-201ENST00000302500 NEURL4Q96JN8 1562 aa17.52■□□□□ 0.4
CLCC1-201ENST00000302500 PTPRTO14522 1441 aa17.51■□□□□ 0.39
CLCC1-201ENST00000302500 WASHC2CQ9Y4E1 1318 aa17.5■□□□□ 0.39
CLCC1-201ENST00000302500 EFCAB6Q5THR3 1501 aa17.5■□□□□ 0.39
CLCC1-201ENST00000302500 NLRP1Q9C000 1473 aa17.49■□□□□ 0.39
CLCC1-201ENST00000302500 TNRQ92752 1358 aa17.49■□□□□ 0.39
CLCC1-201ENST00000302500 LTBP4Q8N2S1 1624 aa17.49■□□□□ 0.39
CLCC1-201ENST00000302500 POLR1AO95602 1720 aaPredicted RBP17.48■□□□□ 0.39
CLCC1-201ENST00000302500 UBR1Q8IWV7 1749 aa17.48■□□□□ 0.39
CLCC1-201ENST00000302500 ANKRD50Q9ULJ7 1429 aa17.48■□□□□ 0.39
CLCC1-201ENST00000302500 CFAP65Q6ZU64 1925 aaKnown RBP17.48■□□□□ 0.39
CLCC1-201ENST00000302500 CHIC2Q9UKJ5 165 aa17.47■□□□□ 0.39
CLCC1-201ENST00000302500 SYNMO15061 1565 aa17.47■□□□□ 0.39
CLCC1-201ENST00000302500 FAM50AQ14320 339 aaKnown RBP17.46■□□□□ 0.38
CLCC1-201ENST00000302500 IQGAP3Q86VI3 1631 aa17.45■□□□□ 0.38
CLCC1-201ENST00000302500 TET3O43151 1660 aa17.45■□□□□ 0.38
CLCC1-201ENST00000302500 KDM5AP29375 1690 aaKnown RBP17.45■□□□□ 0.38
CLCC1-201ENST00000302500 PPARGC1BQ86YN6 1023 aaKnown RBP17.45■□□□□ 0.38
CLCC1-201ENST00000302500 NOS1P29475 1434 aa17.44■□□□□ 0.38
CLCC1-201ENST00000302500 GCC2Q8IWJ2 1684 aa17.44■□□□□ 0.38
CLCC1-201ENST00000302500 UGGT1Q9NYU2 1555 aa17.43■□□□□ 0.38
CLCC1-201ENST00000302500 E9PCH4 1651 aa17.41■□□□□ 0.38
CLCC1-201ENST00000302500 PIK3C2BO00750 1634 aa17.41■□□□□ 0.38
CLCC1-201ENST00000302500 MED14O60244 1454 aa17.41■□□□□ 0.38
CLCC1-201ENST00000302500 ARHGAP23Q9P227 1491 aa17.41■□□□□ 0.38
CLCC1-201ENST00000302500 SLIT1O75093 1534 aa17.39■□□□□ 0.37
CLCC1-201ENST00000302500 RPRD2Q5VT52 1461 aaKnown RBP17.39■□□□□ 0.37
CLCC1-201ENST00000302500 ILDR1Q86SU0 546 aaPredicted RBP17.38■□□□□ 0.37
CLCC1-201ENST00000302500 NCKAP5LQ9HCH0 1330 aa17.37■□□□□ 0.37
CLCC1-201ENST00000302500 NAIPQ13075 1403 aa17.37■□□□□ 0.37
CLCC1-201ENST00000302500 PKD2Q13563 968 aa17.35■□□□□ 0.37
CLCC1-201ENST00000302500 DMRT2Q9Y5R5 561 aa17.35■□□□□ 0.37
CLCC1-201ENST00000302500 IQGAP1P46940 1657 aa17.33■□□□□ 0.36
CLCC1-201ENST00000302500 STRCP1A6NGW2 1772 aa17.33■□□□□ 0.36
CLCC1-201ENST00000302500 KANK1Q14678 1352 aa17.33■□□□□ 0.36
CLCC1-201ENST00000302500 MYO5BQ9ULV0 1848 aa17.32■□□□□ 0.36
CLCC1-201ENST00000302500 HFM1A2PYH4 1435 aa17.31■□□□□ 0.36
CLCC1-201ENST00000302500 ADGRB3O60242 1522 aa17.31■□□□□ 0.36
CLCC1-201ENST00000302500 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.31■□□□□ 0.36
CLCC1-201ENST00000302500 IQSEC2Q5JU85 1478 aa17.31■□□□□ 0.36
CLCC1-201ENST00000302500 TMEM131LA2VDJ0 1609 aa17.3■□□□□ 0.36
CLCC1-201ENST00000302500 CERKQ8TCT0 537 aa17.29■□□□□ 0.36
CLCC1-201ENST00000302500 THEMISQ8N1K5 641 aaPredicted RBP17.28■□□□□ 0.36
CLCC1-201ENST00000302500 FBXO41Q8TF61 875 aa17.28■□□□□ 0.36
CLCC1-201ENST00000302500 IDI1Q13907 227 aa17.27■□□□□ 0.36
CLCC1-201ENST00000302500 ZNF335Q9H4Z2 1342 aaPredicted RBP17.27■□□□□ 0.36
CLCC1-201ENST00000302500 SCAF11Q99590 1463 aaKnown RBP17.27■□□□□ 0.35
CLCC1-201ENST00000302500 NPHP4O75161 1426 aaPredicted RBP17.26■□□□□ 0.35
CLCC1-201ENST00000302500 ZFYVE9O95405 1425 aa17.26■□□□□ 0.35
CLCC1-201ENST00000302500 SPHKAPQ2M3C7 1700 aa17.26■□□□□ 0.35
CLCC1-201ENST00000302500 TMEM2Q9UHN6 1383 aa17.26■□□□□ 0.35
CLCC1-201ENST00000302500 LTKP29376 864 aa17.25■□□□□ 0.35
CLCC1-201ENST00000302500 ALKQ9UM73 1620 aa17.24■□□□□ 0.35
CLCC1-201ENST00000302500 ITGAEP38570 1179 aa17.22■□□□□ 0.35
CLCC1-201ENST00000302500 NUP155O75694 1391 aa17.22■□□□□ 0.35
CLCC1-201ENST00000302500 XIRP1Q702N8 1843 aaKnown RBP17.22■□□□□ 0.35
CLCC1-201ENST00000302500 ANKLE2Q86XL3 938 aa17.21■□□□□ 0.35
CLCC1-201ENST00000302500 CPS1P31327 1500 aa17.2■□□□□ 0.34
CLCC1-201ENST00000302500 SLC52A1Q9NWF4 448 aa17.2■□□□□ 0.34
CLCC1-201ENST00000302500 TRPM2O94759 1503 aa17.18■□□□□ 0.34
CLCC1-201ENST00000302500 CLTCL1P53675 1640 aa17.18■□□□□ 0.34
CLCC1-201ENST00000302500 NWD1Q149M9 1564 aa17.16■□□□□ 0.34
CLCC1-201ENST00000302500 NRXN3Q9Y4C0 1643 aa17.15■□□□□ 0.34
CLCC1-201ENST00000302500 LRRC7Q96NW7 1537 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms