RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 RPRD2Q5VT52 1461 aaKnown RBP17.26■□□□□ 0.35
TPM3-202ENST00000302206 DIEXFQ68CQ4 756 aaKnown RBP17.25■□□□□ 0.35
TPM3-202ENST00000302206 ZFYVE16Q7Z3T8 1539 aa17.25■□□□□ 0.35
TPM3-202ENST00000302206 NUP155O75694 1391 aa17.25■□□□□ 0.35
TPM3-202ENST00000302206 NEO1Q92859 1461 aa17.24■□□□□ 0.35
TPM3-202ENST00000302206 INO80Q9ULG1 1556 aaPredicted RBP17.23■□□□□ 0.35
TPM3-202ENST00000302206 MAGI2Q86UL8 1455 aa17.23■□□□□ 0.35
TPM3-202ENST00000302206 SPAG9O60271 1321 aaKnown RBP17.22■□□□□ 0.35
TPM3-202ENST00000302206 CERKQ8TCT0 537 aa17.22■□□□□ 0.35
TPM3-202ENST00000302206 SCAPERQ9BY12 1400 aa17.21■□□□□ 0.35
TPM3-202ENST00000302206 FRMPD1Q5SYB0 1578 aa17.21■□□□□ 0.35
TPM3-202ENST00000302206 IQGAP3Q86VI3 1631 aa17.21■□□□□ 0.35
TPM3-202ENST00000302206 DISP3Q9P2K9 1392 aa17.2■□□□□ 0.34
TPM3-202ENST00000302206 HSPA2P54652 639 aa17.2■□□□□ 0.34
TPM3-202ENST00000302206 PKD2Q13563 968 aa17.2■□□□□ 0.34
TPM3-202ENST00000302206 ATP7AQ04656 1500 aa17.2■□□□□ 0.34
TPM3-202ENST00000302206 FAM135AQ9P2D6 1515 aa17.2■□□□□ 0.34
TPM3-202ENST00000302206 SOCS7O14512 581 aa17.19■□□□□ 0.34
TPM3-202ENST00000302206 ARHGEF40Q8TER5 1519 aa17.19■□□□□ 0.34
TPM3-202ENST00000302206 ZNF518AQ6AHZ1 1483 aa17.18■□□□□ 0.34
TPM3-202ENST00000302206 FOXD1Q16676 465 aa17.17■□□□□ 0.34
TPM3-202ENST00000302206 AFAP1Q8N556 730 aa17.16■□□□□ 0.34
TPM3-202ENST00000302206 KDM5CP41229 1560 aa17.15■□□□□ 0.34
TPM3-202ENST00000302206 POGZQ7Z3K3 1410 aa17.15■□□□□ 0.34
TPM3-202ENST00000302206 EIF2AK4Q9P2K8 1649 aaKnown RBP17.15■□□□□ 0.34
TPM3-202ENST00000302206 ILDR2Q71H61 639 aa17.15■□□□□ 0.34
TPM3-202ENST00000302206 DEPDC5O75140 1603 aa17.14■□□□□ 0.33
TPM3-202ENST00000302206 RICTORQ6R327 1708 aa17.13■□□□□ 0.33
TPM3-202ENST00000302206 L3MBTL2Q969R5 705 aa17.12■□□□□ 0.33
TPM3-202ENST00000302206 KIDINS220Q9ULH0 1771 aa17.12■□□□□ 0.33
TPM3-202ENST00000302206 MLH3Q9UHC1 1453 aa17.12■□□□□ 0.33
TPM3-202ENST00000302206 DHX29Q7Z478 1369 aaKnown RBP17.11■□□□□ 0.33
TPM3-202ENST00000302206 ATP10AO60312 1499 aa17.11■□□□□ 0.33
TPM3-202ENST00000302206 FER1L4A9Z1Z3 1794 aa17.1■□□□□ 0.33
TPM3-202ENST00000302206 ADRA2BP18089 450 aa17.09■□□□□ 0.33
TPM3-202ENST00000302206 VWDEQ8N2E2 1590 aa17.08■□□□□ 0.32
TPM3-202ENST00000302206 SPATA31D1Q6ZQQ2 1576 aa17.06■□□□□ 0.32
TPM3-202ENST00000302206 PRDM15P57071 1507 aaPredicted RBP17.06■□□□□ 0.32
TPM3-202ENST00000302206 PREX1Q8TCU6 1659 aa17.05■□□□□ 0.32
TPM3-202ENST00000302206 MLECQ14165 292 aa17.05■□□□□ 0.32
TPM3-202ENST00000302206 ZMYM4Q5VZL5 1548 aa17.05■□□□□ 0.32
TPM3-202ENST00000302206 KANK1Q14678 1352 aa17.04■□□□□ 0.32
TPM3-202ENST00000302206 A2MP01023 1474 aa17.04■□□□□ 0.32
TPM3-202ENST00000302206 SIGLEC1Q9BZZ2 1709 aa17.04■□□□□ 0.32
TPM3-202ENST00000302206 UHRF1BP1Q6BDS2 1440 aa17.04■□□□□ 0.32
TPM3-202ENST00000302206 TET3O43151 1660 aa17.04■□□□□ 0.32
TPM3-202ENST00000302206 RNF17Q9BXT8 1623 aaKnown RBP17.03■□□□□ 0.32
TPM3-202ENST00000302206 KCNA4P22459 653 aa17.03■□□□□ 0.32
TPM3-202ENST00000302206 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.03■□□□□ 0.322e-9■■■■□ 23.9
TPM3-202ENST00000302206 PLA2R1Q13018 1463 aa17.03■□□□□ 0.32
TPM3-202ENST00000302206 YEATS2Q9ULM3 1422 aa17.03■□□□□ 0.32
TPM3-202ENST00000302206 DMRT2Q9Y5R5 561 aa17.02■□□□□ 0.32
TPM3-202ENST00000302206 MROH1Q8NDA8 1641 aa17.02■□□□□ 0.31
TPM3-202ENST00000302206 CCDC144AA2RUR9 1427 aa17.02■□□□□ 0.31
TPM3-202ENST00000302206 LMTK2Q8IWU2 1503 aa17■□□□□ 0.31
TPM3-202ENST00000302206 MYT1LQ9UL68 1186 aa16.99■□□□□ 0.31
TPM3-202ENST00000302206 E9PCH4 1651 aa16.99■□□□□ 0.31
TPM3-202ENST00000302206 ABCA6Q8N139 1617 aa16.99■□□□□ 0.31
TPM3-202ENST00000302206 PTPRTO14522 1441 aa16.98■□□□□ 0.31
TPM3-202ENST00000302206 NBPF8Q3BBV2 869 aa16.98■□□□□ 0.31
TPM3-202ENST00000302206 STRCQ7RTU9 1775 aa16.97■□□□□ 0.31
TPM3-202ENST00000302206 TRPM2O94759 1503 aa16.97■□□□□ 0.31
TPM3-202ENST00000302206 KIF3BO15066 747 aa16.97■□□□□ 0.31
TPM3-202ENST00000302206 EIF4G2P78344 907 aaKnown RBP eCLIP16.96■□□□□ 0.31
TPM3-202ENST00000302206 DIP2CQ9Y2E4 1556 aa16.96■□□□□ 0.31
TPM3-202ENST00000302206 SPHKAPQ2M3C7 1700 aa16.95■□□□□ 0.3
TPM3-202ENST00000302206 NEURL4Q96JN8 1562 aa16.94■□□□□ 0.3
TPM3-202ENST00000302206 RALGAPBQ86X10 1494 aa16.94■□□□□ 0.3
TPM3-202ENST00000302206 EFCAB6Q5THR3 1501 aa16.93■□□□□ 0.3
TPM3-202ENST00000302206 HSPA5P11021 654 aaKnown RBP16.93■□□□□ 0.3
TPM3-202ENST00000302206 CEBPAP49715 358 aaPredicted RBP16.93■□□□□ 0.3
TPM3-202ENST00000302206 MIER1Q8N108 512 aa16.93■□□□□ 0.3
TPM3-202ENST00000302206 SETD1BQ9UPS6 1966 aaKnown RBP16.93■□□□□ 0.3
TPM3-202ENST00000302206 SPATA31E1Q6ZUB1 1445 aa16.92■□□□□ 0.3
TPM3-202ENST00000302206 CEP152O94986 1710 aa16.9■□□□□ 0.3
TPM3-202ENST00000302206 STAC3Q96MF2 364 aa16.89■□□□□ 0.29
TPM3-202ENST00000302206 REREQ9P2R6 1566 aa16.89■□□□□ 0.29
TPM3-202ENST00000302206 PRAG1Q86YV5 1406 aa16.87■□□□□ 0.29
TPM3-202ENST00000302206 CLTCL1P53675 1640 aa16.87■□□□□ 0.29
TPM3-202ENST00000302206 IQSEC2Q5JU85 1478 aa16.86■□□□□ 0.29
TPM3-202ENST00000302206 ZC3H13Q5T200 1668 aaKnown RBP16.86■□□□□ 0.29
TPM3-202ENST00000302206 DCAF11Q8TEB1 546 aa16.86■□□□□ 0.29
TPM3-202ENST00000302206 POLR1AO95602 1720 aaPredicted RBP16.86■□□□□ 0.29
TPM3-202ENST00000302206 ABCC3O15438 1527 aa16.86■□□□□ 0.29
TPM3-202ENST00000302206 LAMC1P11047 1609 aa16.85■□□□□ 0.29
TPM3-202ENST00000302206 TRPM1Q7Z4N2 1603 aa16.85■□□□□ 0.29
TPM3-202ENST00000302206 HIRIP3Q9BW71 556 aaPredicted RBP16.85■□□□□ 0.29
TPM3-202ENST00000302206 DDX10Q13206 875 aaKnown RBP16.84■□□□□ 0.29
TPM3-202ENST00000302206 GPRASP1Q5JY77 1395 aa16.83■□□□□ 0.28
TPM3-202ENST00000302206 LTBP4Q8N2S1 1624 aa16.83■□□□□ 0.28
TPM3-202ENST00000302206 AGLP35573 1532 aa16.82■□□□□ 0.28
TPM3-202ENST00000302206 ARHGAP31Q2M1Z3 1444 aa16.82■□□□□ 0.28
TPM3-202ENST00000302206 USP47Q96K76 1375 aa16.82■□□□□ 0.28
TPM3-202ENST00000302206 CAMSAP1Q5T5Y3 1602 aa16.81■□□□□ 0.28
TPM3-202ENST00000302206 CNTLNQ9NXG0 1405 aa16.81■□□□□ 0.28
TPM3-202ENST00000302206 PPP6R1Q9UPN7 881 aa16.81■□□□□ 0.28
TPM3-202ENST00000302206 C3P01024 1663 aa16.81■□□□□ 0.28
TPM3-202ENST00000302206 WASHC2AQ641Q2 1341 aa16.8■□□□□ 0.28
TPM3-202ENST00000302206 ZNF326Q5BKZ1 582 aaKnown RBP16.8■□□□□ 0.28
TPM3-202ENST00000302206 KDM2AQ9Y2K7 1162 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms