RNA–Protein interactions for RNA: ENST00000302182.7

UBB-201, Transcript of ubiquitin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBB, Length 1,225 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-201ENST00000302182 KDM5DQ9BY66 1539 aa24.61■■□□□ 1.53
UBB-201ENST00000302182 TCOF1Q13428 1488 aaKnown RBP24.61■■□□□ 1.53
UBB-201ENST00000302182 RRP7BPQ9NSQ0 103 aa24.6■■□□□ 1.53
UBB-201ENST00000302182 NCOA1Q15788 1441 aa24.6■■□□□ 1.53
UBB-201ENST00000302182 FAM135AQ9P2D6 1515 aa24.59■■□□□ 1.53
UBB-201ENST00000302182 DAPK1P53355 1430 aa24.59■■□□□ 1.53
UBB-201ENST00000302182 CAMSAP1Q5T5Y3 1602 aa24.58■■□□□ 1.53
UBB-201ENST00000302182 MYO3AQ8NEV4 1616 aa24.58■■□□□ 1.53
UBB-201ENST00000302182 SHANK2Q9UPX8 1470 aa24.58■■□□□ 1.52
UBB-201ENST00000302182 CERKQ8TCT0 537 aa24.57■■□□□ 1.52
UBB-201ENST00000302182 PTPRTO14522 1441 aa24.57■■□□□ 1.52
UBB-201ENST00000302182 PZPP20742 1482 aa24.57■■□□□ 1.52
UBB-201ENST00000302182 RNF17Q9BXT8 1623 aaKnown RBP24.57■■□□□ 1.52
UBB-201ENST00000302182 DUOX2Q9NRD8 1548 aa24.56■■□□□ 1.52
UBB-201ENST00000302182 KIF15Q9NS87 1388 aa24.56■■□□□ 1.52
UBB-201ENST00000302182 CHIC2Q9UKJ5 165 aa24.56■■□□□ 1.52
UBB-201ENST00000302182 CROCC2H7BZ55 1655 aa24.56■■□□□ 1.52
UBB-201ENST00000302182 CEP170BQ9Y4F5 1589 aaPredicted RBP24.55■■□□□ 1.52
UBB-201ENST00000302182 DNMT1P26358 1616 aaKnown RBP24.55■■□□□ 1.52
UBB-201ENST00000302182 EIF2AK4Q9P2K8 1649 aaKnown RBP24.55■■□□□ 1.52
UBB-201ENST00000302182 ZNF142P52746 1687 aaPredicted RBP24.55■■□□□ 1.52
UBB-201ENST00000302182 NCKAP5LQ9HCH0 1330 aa24.55■■□□□ 1.52
UBB-201ENST00000302182 TNRQ92752 1358 aa24.54■■□□□ 1.52
UBB-201ENST00000302182 A2ML1A8K2U0 1454 aa24.51■■□□□ 1.51
UBB-201ENST00000302182 ABCC3O15438 1527 aa24.51■■□□□ 1.51
UBB-201ENST00000302182 MROH1Q8NDA8 1641 aa24.51■■□□□ 1.51
UBB-201ENST00000302182 FAM50AQ14320 339 aaKnown RBP24.51■■□□□ 1.51
UBB-201ENST00000302182 PKD2Q13563 968 aa24.49■■□□□ 1.51
UBB-201ENST00000302182 PLA2R1Q13018 1463 aa24.49■■□□□ 1.51
UBB-201ENST00000302182 ERBINQ96RT1 1412 aa24.48■■□□□ 1.51
UBB-201ENST00000302182 ANKRD30AQ9BXX3 1397 aa24.47■■□□□ 1.51
UBB-201ENST00000302182 ZC3H13Q5T200 1668 aaKnown RBP24.46■■□□□ 1.51
UBB-201ENST00000302182 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.45■■□□□ 1.51e-11■□□□□ 10.5
UBB-201ENST00000302182 PPARGC1BQ86YN6 1023 aaKnown RBP24.44■■□□□ 1.5
UBB-201ENST00000302182 CEP152O94986 1710 aa24.43■■□□□ 1.5
UBB-201ENST00000302182 SENP3Q9H4L4 574 aaPredicted RBP24.42■■□□□ 1.5
UBB-201ENST00000302182 NLRP1Q9C000 1473 aa24.41■■□□□ 1.5
UBB-201ENST00000302182 CFAP65Q6ZU64 1925 aaKnown RBP24.41■■□□□ 1.5
UBB-201ENST00000302182 PRDM15P57071 1507 aaPredicted RBP24.4■■□□□ 1.5
UBB-201ENST00000302182 THEMISQ8N1K5 641 aaPredicted RBP24.4■■□□□ 1.5
UBB-201ENST00000302182 SPATA31D1Q6ZQQ2 1576 aa24.4■■□□□ 1.5
UBB-201ENST00000302182 LTBP4Q8N2S1 1624 aa24.39■■□□□ 1.5
UBB-201ENST00000302182 ADGRL2O95490 1459 aa24.39■■□□□ 1.5
UBB-201ENST00000302182 ERVK-7P63135 1459 aa24.39■■□□□ 1.5
UBB-201ENST00000302182 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.39■■□□□ 1.497e-45■■■□□ 14.9
UBB-201ENST00000302182 DEPDC5O75140 1603 aa24.38■■□□□ 1.49
UBB-201ENST00000302182 UGGT1Q9NYU2 1555 aa24.37■■□□□ 1.49
UBB-201ENST00000302182 ARHGAP31Q2M1Z3 1444 aa24.36■■□□□ 1.49
UBB-201ENST00000302182 ZNF335Q9H4Z2 1342 aaPredicted RBP24.35■■□□□ 1.49
UBB-201ENST00000302182 KANK1Q14678 1352 aa24.35■■□□□ 1.49
UBB-201ENST00000302182 ANKLE2Q86XL3 938 aa24.34■■□□□ 1.49
UBB-201ENST00000302182 ANKRD50Q9ULJ7 1429 aa24.31■■□□□ 1.48
UBB-201ENST00000302182 VWDEQ8N2E2 1590 aa24.3■■□□□ 1.48
UBB-201ENST00000302182 NEURL4Q96JN8 1562 aa24.3■■□□□ 1.48
UBB-201ENST00000302182 POLR1AO95602 1720 aaPredicted RBP24.29■■□□□ 1.48
UBB-201ENST00000302182 LMTK2Q8IWU2 1503 aa24.29■■□□□ 1.48
UBB-201ENST00000302182 ITGAEP38570 1179 aa24.26■■□□□ 1.47
UBB-201ENST00000302182 ROCK1Q13464 1354 aa24.24■■□□□ 1.47
UBB-201ENST00000302182 MED14O60244 1454 aa24.24■■□□□ 1.47
UBB-201ENST00000302182 UBR1Q8IWV7 1749 aa24.24■■□□□ 1.47
UBB-201ENST00000302182 IQSEC2Q5JU85 1478 aa24.23■■□□□ 1.47
UBB-201ENST00000302182 NPHP4O75161 1426 aaPredicted RBP24.22■■□□□ 1.47
UBB-201ENST00000302182 IDI1Q13907 227 aa24.21■■□□□ 1.47
UBB-201ENST00000302182 LTKP29376 864 aa24.2■■□□□ 1.46
UBB-201ENST00000302182 EFCAB6Q5THR3 1501 aa24.2■■□□□ 1.46
UBB-201ENST00000302182 NOS1P29475 1434 aa24.18■■□□□ 1.46
UBB-201ENST00000302182 PIK3C2BO00750 1634 aa24.17■■□□□ 1.46
UBB-201ENST00000302182 ARHGAP23Q9P227 1491 aa24.16■■□□□ 1.46
UBB-201ENST00000302182 TXNDC2Q86VQ3 553 aa24.16■■□□□ 1.46
UBB-201ENST00000302182 STAG3Q9UJ98 1225 aa24.16■■□□□ 1.46
UBB-201ENST00000302182 SYNMO15061 1565 aa24.16■■□□□ 1.46
UBB-201ENST00000302182 SLIT1O75093 1534 aa24.15■■□□□ 1.46
UBB-201ENST00000302182 IQGAP1P46940 1657 aa24.15■■□□□ 1.46
UBB-201ENST00000302182 SLC52A1Q9NWF4 448 aa24.13■■□□□ 1.45
UBB-201ENST00000302182 SCAF11Q99590 1463 aaKnown RBP24.13■■□□□ 1.45
UBB-201ENST00000302182 UNC13BO14795 1591 aa24.12■■□□□ 1.45
UBB-201ENST00000302182 RRBP1Q9P2E9 1410 aaKnown RBP24.12■■□□□ 1.45
UBB-201ENST00000302182 UBAP1LF5GYI3 381 aa24.12■■□□□ 1.45
UBB-201ENST00000302182 EID1Q9Y6B2 187 aa24.12■■□□□ 1.45
UBB-201ENST00000302182 TMEM2Q9UHN6 1383 aa24.12■■□□□ 1.45
UBB-201ENST00000302182 RPRD2Q5VT52 1461 aaKnown RBP24.12■■□□□ 1.45
UBB-201ENST00000302182 CPS1P31327 1500 aa24.1■■□□□ 1.45
UBB-201ENST00000302182 TET3O43151 1660 aa24.1■■□□□ 1.45
UBB-201ENST00000302182 KDM5AP29375 1690 aaKnown RBP24.08■■□□□ 1.44
UBB-201ENST00000302182 NUP155O75694 1391 aa24.07■■□□□ 1.44
UBB-201ENST00000302182 PHF23Q9BUL5 403 aaPredicted RBP24.07■■□□□ 1.44
UBB-201ENST00000302182 GCC2Q8IWJ2 1684 aa24.05■■□□□ 1.44
UBB-201ENST00000302182 STRCP1A6NGW2 1772 aa24.04■■□□□ 1.44
UBB-201ENST00000302182 IQGAP3Q86VI3 1631 aa24.04■■□□□ 1.44
UBB-201ENST00000302182 ADGRB3O60242 1522 aa24.03■■□□□ 1.44
UBB-201ENST00000302182 E9PCH4 1651 aa24.02■■□□□ 1.44
UBB-201ENST00000302182 LRRC7Q96NW7 1537 aa23.99■■□□□ 1.43
UBB-201ENST00000302182 TOM1O60784 492 aa23.98■■□□□ 1.43
UBB-201ENST00000302182 NAIPQ13075 1403 aa23.97■■□□□ 1.43
UBB-201ENST00000302182 SLC26A8Q96RN1 970 aa23.97■■□□□ 1.43
UBB-201ENST00000302182 PIP4K2BP78356 416 aa23.96■■□□□ 1.43
UBB-201ENST00000302182 MYO5BQ9ULV0 1848 aa23.96■■□□□ 1.43
UBB-201ENST00000302182 CHGAP10645 457 aaKnown RBP23.95■■□□□ 1.42
UBB-201ENST00000302182 TMEM131LA2VDJ0 1609 aa23.95■■□□□ 1.42
UBB-201ENST00000302182 ZFYVE9O95405 1425 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms