RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 LAMC1P11047 1609 aa21.29■■□□□ 1
CHAF1A-201ENST00000301280 IQGAP3Q86VI3 1631 aa21.27■■□□□ 1
CHAF1A-201ENST00000301280 RBM19Q9Y4C8 960 aaKnown RBP21.27■■□□□ 1
CHAF1A-201ENST00000301280 CC2D1BQ5T0F9 858 aaKnown RBP21.27■□□□□ 0.99
CHAF1A-201ENST00000301280 MAGI2Q86UL8 1455 aa21.26■□□□□ 0.99
CHAF1A-201ENST00000301280 CHGAP10645 457 aaKnown RBP21.26■□□□□ 0.99
CHAF1A-201ENST00000301280 CCDC141Q6ZP82 1450 aa21.26■□□□□ 0.99
CHAF1A-201ENST00000301280 CLASP1Q7Z460 1538 aa21.26■□□□□ 0.99
CHAF1A-201ENST00000301280 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.26■□□□□ 0.991e-6■■■■■ 42.9
CHAF1A-201ENST00000301280 ABCC2Q92887 1545 aa21.26■□□□□ 0.99
CHAF1A-201ENST00000301280 TRPM1Q7Z4N2 1603 aa21.24■□□□□ 0.99
CHAF1A-201ENST00000301280 ARID4BQ4LE39 1312 aaPredicted RBP21.21■□□□□ 0.99
CHAF1A-201ENST00000301280 NBPF1Q3BBV0 1214 aa21.21■□□□□ 0.99
CHAF1A-201ENST00000301280 FAM135AQ9P2D6 1515 aa21.2■□□□□ 0.99
CHAF1A-201ENST00000301280 UHRF1BP1LA0JNW5 1464 aa21.2■□□□□ 0.98
CHAF1A-201ENST00000301280 DHX29Q7Z478 1369 aaKnown RBP21.18■□□□□ 0.98
CHAF1A-201ENST00000301280 ERICH6Q7L0X2 663 aa21.18■□□□□ 0.98
CHAF1A-201ENST00000301280 ZCCHC11Q5TAX3 1644 aaKnown RBP21.17■□□□□ 0.98
CHAF1A-201ENST00000301280 ATP10AO60312 1499 aa21.16■□□□□ 0.98
CHAF1A-201ENST00000301280 USP47Q96K76 1375 aa21.16■□□□□ 0.98
CHAF1A-201ENST00000301280 ERCC6L2Q5T890 1561 aa21.16■□□□□ 0.98
CHAF1A-201ENST00000301280 ARAP3Q8WWN8 1544 aa21.16■□□□□ 0.98
CHAF1A-201ENST00000301280 SYCP2Q9BX26 1530 aa21.16■□□□□ 0.98
CHAF1A-201ENST00000301280 MSH5O43196 834 aa21.15■□□□□ 0.98
CHAF1A-201ENST00000301280 PLEKHH2Q8IVE3 1493 aa21.14■□□□□ 0.97
CHAF1A-201ENST00000301280 RSPH4AQ5TD94 716 aa21.13■□□□□ 0.97
CHAF1A-201ENST00000301280 KIF15Q9NS87 1388 aa21.13■□□□□ 0.97
CHAF1A-201ENST00000301280 AFAP1Q8N556 730 aa21.12■□□□□ 0.97
CHAF1A-201ENST00000301280 RNF17Q9BXT8 1623 aaKnown RBP21.12■□□□□ 0.97
CHAF1A-201ENST00000301280 DEPDC5O75140 1603 aa21.1■□□□□ 0.97
CHAF1A-201ENST00000301280 ABCC1P33527 1531 aa21.09■□□□□ 0.97
CHAF1A-201ENST00000301280 DUOX2Q9NRD8 1548 aa21.09■□□□□ 0.97
CHAF1A-201ENST00000301280 BCL11AQ9H165 835 aa21.08■□□□□ 0.97
CHAF1A-201ENST00000301280 NUTM2DQ5VT03 806 aaPredicted RBP21.08■□□□□ 0.96
CHAF1A-201ENST00000301280 ROCK2O75116 1388 aaKnown RBP21.08■□□□□ 0.96
CHAF1A-201ENST00000301280 PLA2R1Q13018 1463 aa21.07■□□□□ 0.96
CHAF1A-201ENST00000301280 EIF2AK4Q9P2K8 1649 aaKnown RBP21.06■□□□□ 0.96
CHAF1A-201ENST00000301280 PRDM15P57071 1507 aaPredicted RBP21.06■□□□□ 0.96
CHAF1A-201ENST00000301280 ERBINQ96RT1 1412 aa21.05■□□□□ 0.96
CHAF1A-201ENST00000301280 NPM2Q86SE8 214 aaKnown RBP21.04■□□□□ 0.96
CHAF1A-201ENST00000301280 ARHGAP5Q13017 1502 aa21.04■□□□□ 0.96
CHAF1A-201ENST00000301280 GPRASP1Q5JY77 1395 aa21.04■□□□□ 0.96
CHAF1A-201ENST00000301280 TNNT2P45379 298 aaPredicted RBP21.04■□□□□ 0.96
CHAF1A-201ENST00000301280 CCDC136Q96JN2 1154 aa21.03■□□□□ 0.96
CHAF1A-201ENST00000301280 NEURL4Q96JN8 1562 aa21.03■□□□□ 0.96
CHAF1A-201ENST00000301280 CEP152O94986 1710 aa21.02■□□□□ 0.96
CHAF1A-201ENST00000301280 PRAG1Q86YV5 1406 aa21.01■□□□□ 0.95
CHAF1A-201ENST00000301280 ABCA9Q8IUA7 1624 aa21.01■□□□□ 0.95
CHAF1A-201ENST00000301280 ERICH6BQ5W0A0 696 aa21.01■□□□□ 0.95
CHAF1A-201ENST00000301280 PLCH2O75038 1416 aa21■□□□□ 0.95
CHAF1A-201ENST00000301280 ZBED9Q6R2W3 1325 aa21■□□□□ 0.95
CHAF1A-201ENST00000301280 SPHKAPQ2M3C7 1700 aa20.98■□□□□ 0.95
CHAF1A-201ENST00000301280 VWDEQ8N2E2 1590 aa20.98■□□□□ 0.95
CHAF1A-201ENST00000301280 KIF3BO15066 747 aa20.98■□□□□ 0.95
CHAF1A-201ENST00000301280 KTN1Q86UP2 1357 aaKnown RBP20.97■□□□□ 0.95
CHAF1A-201ENST00000301280 IQGAP1P46940 1657 aa20.97■□□□□ 0.95
CHAF1A-201ENST00000301280 INO80Q9ULG1 1556 aaPredicted RBP20.97■□□□□ 0.95
CHAF1A-201ENST00000301280 A2MP01023 1474 aa20.97■□□□□ 0.95
CHAF1A-201ENST00000301280 PLIN1O60240 522 aa20.96■□□□□ 0.95
CHAF1A-201ENST00000301280 SAFB2Q14151 953 aaKnown RBP eCLIP20.95■□□□□ 0.94
CHAF1A-201ENST00000301280 GGT6Q6P531 493 aa20.95■□□□□ 0.94
CHAF1A-201ENST00000301280 ZFYVE16Q7Z3T8 1539 aa20.95■□□□□ 0.94
CHAF1A-201ENST00000301280 PANK3Q9H999 370 aa20.94■□□□□ 0.94
CHAF1A-201ENST00000301280 RTEL1-TNFRSF6BF6WH68 1400 aa20.93■□□□□ 0.94
CHAF1A-201ENST00000301280 KIAA1210Q9ULL0 1709 aa20.93■□□□□ 0.94
CHAF1A-201ENST00000301280 CDCA7LQ96GN5 454 aa20.93■□□□□ 0.94
CHAF1A-201ENST00000301280 PPP4R2Q9NY27 417 aa20.93■□□□□ 0.94
CHAF1A-201ENST00000301280 ZMYM4Q5VZL5 1548 aa20.93■□□□□ 0.94
CHAF1A-201ENST00000301280 MADDQ8WXG6 1647 aa20.93■□□□□ 0.94
CHAF1A-201ENST00000301280 TET3O43151 1660 aa20.91■□□□□ 0.94
CHAF1A-201ENST00000301280 NEUROD2Q15784 382 aa20.91■□□□□ 0.94
CHAF1A-201ENST00000301280 EFCAB2Q5VUJ9 269 aa20.91■□□□□ 0.94
CHAF1A-201ENST00000301280 SKAP1Q86WV1 359 aa20.91■□□□□ 0.94
CHAF1A-201ENST00000301280 TRPM2O94759 1503 aa20.91■□□□□ 0.94
CHAF1A-201ENST00000301280 CCDC144AA2RUR9 1427 aa20.9■□□□□ 0.94
CHAF1A-201ENST00000301280 LRPPRCP42704 1394 aaKnown RBP20.9■□□□□ 0.94
CHAF1A-201ENST00000301280 COL17A1Q9UMD9 1497 aaPredicted RBP20.89■□□□□ 0.94
CHAF1A-201ENST00000301280 SMG6Q86US8 1419 aaKnown RBP20.89■□□□□ 0.93
CHAF1A-201ENST00000301280 PLPPR3Q6T4P5 718 aa20.89■□□□□ 0.93
CHAF1A-201ENST00000301280 NBR1Q14596 966 aa20.89■□□□□ 0.93
CHAF1A-201ENST00000301280 WDR7Q9Y4E6 1490 aa20.88■□□□□ 0.93
CHAF1A-201ENST00000301280 IFT172Q9UG01 1749 aa20.87■□□□□ 0.93
CHAF1A-201ENST00000301280 SPAG9O60271 1321 aaKnown RBP20.87■□□□□ 0.93
CHAF1A-201ENST00000301280 CCDC146Q8IYE0 955 aa20.86■□□□□ 0.93
CHAF1A-201ENST00000301280 RNF123Q5XPI4 1314 aa20.86■□□□□ 0.93
CHAF1A-201ENST00000301280 MROH1Q8NDA8 1641 aa20.86■□□□□ 0.93
CHAF1A-201ENST00000301280 INSRP06213 1382 aa20.85■□□□□ 0.93
CHAF1A-201ENST00000301280 PTPRTO14522 1441 aa20.85■□□□□ 0.93
CHAF1A-201ENST00000301280 PNISRQ8TF01 805 aaKnown RBP20.83■□□□□ 0.93
CHAF1A-201ENST00000301280 KNSTRNQ9Y448 316 aa20.82■□□□□ 0.92
CHAF1A-201ENST00000301280 NPM1P06748 294 aaKnown RBP eCLIP20.81■□□□□ 0.92
CHAF1A-201ENST00000301280 CLTCL1P53675 1640 aa20.81■□□□□ 0.92
CHAF1A-201ENST00000301280 FANCIQ9NVI1 1328 aa20.81■□□□□ 0.92
CHAF1A-201ENST00000301280 NUDCQ9Y266 331 aa20.81■□□□□ 0.92
CHAF1A-201ENST00000301280 TRAPPC8Q9Y2L5 1435 aa20.8■□□□□ 0.92
CHAF1A-201ENST00000301280 BRD4O60885 1362 aaPredicted RBP20.8■□□□□ 0.92
CHAF1A-201ENST00000301280 PARD3Q8TEW0 1356 aa20.8■□□□□ 0.92
CHAF1A-201ENST00000301280 EXOC6Q8TAG9 804 aa20.8■□□□□ 0.92
CHAF1A-201ENST00000301280 TMF1P82094 1093 aa20.79■□□□□ 0.92
CHAF1A-201ENST00000301280 MYOM1P52179 1685 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms