RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 CFDP1Q9UEE9 299 aaPredicted RBP16.98■□□□□ 0.31
TVP23A-201ENST00000299866 ARXQ96QS3 562 aa16.96■□□□□ 0.31
TVP23A-201ENST00000299866 PARD3Q8TEW0 1356 aa16.96■□□□□ 0.31
TVP23A-201ENST00000299866 RALGAPBQ86X10 1494 aa16.96■□□□□ 0.31
TVP23A-201ENST00000299866 POGKQ9P215 609 aa16.95■□□□□ 0.3
TVP23A-201ENST00000299866 DNMT1P26358 1616 aaKnown RBP16.95■□□□□ 0.3
TVP23A-201ENST00000299866 NUP155O75694 1391 aa16.93■□□□□ 0.3
TVP23A-201ENST00000299866 PER1O15534 1290 aaPredicted RBP16.93■□□□□ 0.3
TVP23A-201ENST00000299866 UHRF1BP1Q6BDS2 1440 aa16.92■□□□□ 0.3
TVP23A-201ENST00000299866 SLKQ9H2G2 1235 aaPredicted RBP16.92■□□□□ 0.3
TVP23A-201ENST00000299866 ADAMTS8Q9UP79 889 aa16.92■□□□□ 0.3
TVP23A-201ENST00000299866 LAMC3Q9Y6N6 1575 aa16.91■□□□□ 0.3
TVP23A-201ENST00000299866 PANK3Q9H999 370 aa16.91■□□□□ 0.3
TVP23A-201ENST00000299866 RGL3Q3MIN7 710 aa16.9■□□□□ 0.3
TVP23A-201ENST00000299866 RRAGDQ9NQL2 400 aaPredicted RBP16.9■□□□□ 0.3
TVP23A-201ENST00000299866 URB2Q14146 1524 aaKnown RBP16.9■□□□□ 0.3
TVP23A-201ENST00000299866 NBPF1Q3BBV0 1214 aa16.89■□□□□ 0.29
TVP23A-201ENST00000299866 WDR62O43379 1518 aa16.89■□□□□ 0.29
TVP23A-201ENST00000299866 KIF21AQ7Z4S6 1674 aa16.88■□□□□ 0.29
TVP23A-201ENST00000299866 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.88■□□□□ 0.29
TVP23A-201ENST00000299866 DUSP27Q5VZP5 1158 aa16.88■□□□□ 0.29
TVP23A-201ENST00000299866 ANKRD30AQ9BXX3 1397 aa16.87■□□□□ 0.29
TVP23A-201ENST00000299866 ANKRD50Q9ULJ7 1429 aa16.86■□□□□ 0.29
TVP23A-201ENST00000299866 BLMP54132 1417 aaPredicted RBP16.86■□□□□ 0.29
TVP23A-201ENST00000299866 WDR43Q15061 677 aaKnown RBP eCLIP16.86■□□□□ 0.29
TVP23A-201ENST00000299866 CAMSAP2Q08AD1 1489 aa16.85■□□□□ 0.29
TVP23A-201ENST00000299866 KIAA0586Q9BVV6 1533 aa16.85■□□□□ 0.29
TVP23A-201ENST00000299866 PRG4Q92954 1404 aaPredicted RBP16.84■□□□□ 0.29
TVP23A-201ENST00000299866 GOLGA2Q08379 1002 aa16.84■□□□□ 0.29
TVP23A-201ENST00000299866 PLEKHH1Q9ULM0 1364 aa16.84■□□□□ 0.29
TVP23A-201ENST00000299866 SEC24BO95487 1268 aa16.84■□□□□ 0.29
TVP23A-201ENST00000299866 IQGAP2Q13576 1575 aa16.83■□□□□ 0.28
TVP23A-201ENST00000299866 BECN1Q14457 450 aa16.81■□□□□ 0.28
TVP23A-201ENST00000299866 NAP1L5Q96NT1 182 aaPredicted RBP16.81■□□□□ 0.28
TVP23A-201ENST00000299866 DISP3Q9P2K9 1392 aa16.81■□□□□ 0.28
TVP23A-201ENST00000299866 ZMYM4Q5VZL5 1548 aa16.81■□□□□ 0.28
TVP23A-201ENST00000299866 IGHDP01880 384 aa16.81■□□□□ 0.28
TVP23A-201ENST00000299866 L1TD1Q5T7N2 865 aaKnown RBP16.81■□□□□ 0.28
TVP23A-201ENST00000299866 USP19O94966 1318 aa16.81■□□□□ 0.28
TVP23A-201ENST00000299866 BCAR3O75815 825 aa16.8■□□□□ 0.28
TVP23A-201ENST00000299866 CCDC146Q8IYE0 955 aa16.8■□□□□ 0.28
TVP23A-201ENST00000299866 E9PCH4 1651 aa16.8■□□□□ 0.28
TVP23A-201ENST00000299866 SPRYD3Q8NCJ5 442 aa16.79■□□□□ 0.28
TVP23A-201ENST00000299866 GZF1Q9H116 711 aaPredicted RBP16.79■□□□□ 0.28
TVP23A-201ENST00000299866 ARHGEF12Q9NZN5 1544 aa16.78■□□□□ 0.28
TVP23A-201ENST00000299866 NUP153P49790 1475 aaKnown RBP16.78■□□□□ 0.28
TVP23A-201ENST00000299866 PLEKHH2Q8IVE3 1493 aa16.78■□□□□ 0.28
TVP23A-201ENST00000299866 PKNOX2Q96KN3 472 aa16.77■□□□□ 0.28
TVP23A-201ENST00000299866 TESK2Q96S53 571 aa16.77■□□□□ 0.27
TVP23A-201ENST00000299866 PDS5BQ9NTI5 1447 aa16.76■□□□□ 0.27
TVP23A-201ENST00000299866 TSPY4P0CV99 314 aa16.76■□□□□ 0.27
TVP23A-201ENST00000299866 TSPY10P0CW01 314 aa16.76■□□□□ 0.27
TVP23A-201ENST00000299866 TMF1P82094 1093 aa16.76■□□□□ 0.27
TVP23A-201ENST00000299866 SLFN5Q08AF3 891 aa16.76■□□□□ 0.27
TVP23A-201ENST00000299866 SPINK5Q9NQ38 1064 aaPredicted RBP16.76■□□□□ 0.27
TVP23A-201ENST00000299866 PPP2R1AP30153 589 aa16.75■□□□□ 0.27
TVP23A-201ENST00000299866 GPATCH8Q9UKJ3 1502 aaKnown RBP16.75■□□□□ 0.27
TVP23A-201ENST00000299866 GLIPR1L2Q4G1C9 344 aa16.75■□□□□ 0.27
TVP23A-201ENST00000299866 KNSTRNQ9Y448 316 aa16.75■□□□□ 0.27
TVP23A-201ENST00000299866 PNNQ9H307 717 aaKnown RBP16.74■□□□□ 0.27
TVP23A-201ENST00000299866 ZNF608Q9ULD9 1512 aaPredicted RBP16.74■□□□□ 0.27
TVP23A-201ENST00000299866 INSRP06213 1382 aa16.74■□□□□ 0.27
TVP23A-201ENST00000299866 VSIG10Q8N0Z9 540 aa16.74■□□□□ 0.27
TVP23A-201ENST00000299866 ADGRL2O95490 1459 aa16.74■□□□□ 0.27
TVP23A-201ENST00000299866 XRCC6P12956 609 aaKnown RBP eCLIP16.74■□□□□ 0.27
TVP23A-201ENST00000299866 TROQ12816 1431 aaPredicted RBP16.74■□□□□ 0.27
TVP23A-201ENST00000299866 CANXP27824 592 aaKnown RBP16.73■□□□□ 0.27
TVP23A-201ENST00000299866 PANK2Q9BZ23 570 aa16.73■□□□□ 0.27
TVP23A-201ENST00000299866 GOLGA6L3A6NEY3 463 aa16.73■□□□□ 0.27
TVP23A-201ENST00000299866 ZNF521Q96K83 1311 aa16.72■□□□□ 0.27
TVP23A-201ENST00000299866 PRAG1Q86YV5 1406 aa16.72■□□□□ 0.27
TVP23A-201ENST00000299866 APAF1O14727 1248 aa16.72■□□□□ 0.27
TVP23A-201ENST00000299866 COG6Q9Y2V7 657 aa16.72■□□□□ 0.27
TVP23A-201ENST00000299866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.72■□□□□ 0.27
TVP23A-201ENST00000299866 ADGBQ8N7X0 1667 aa16.71■□□□□ 0.27
TVP23A-201ENST00000299866 HNRNPMP52272 730 aaKnown RBP eCLIP16.71■□□□□ 0.27
TVP23A-201ENST00000299866 PANK1Q8TE04 598 aa16.71■□□□□ 0.27
TVP23A-201ENST00000299866 ERBINQ96RT1 1412 aa16.71■□□□□ 0.27
TVP23A-201ENST00000299866 COL17A1Q9UMD9 1497 aaPredicted RBP16.71■□□□□ 0.26
TVP23A-201ENST00000299866 ANTXR1Q9H6X2 564 aa16.7■□□□□ 0.26
TVP23A-201ENST00000299866 UPF2Q9HAU5 1272 aaKnown RBP16.7■□□□□ 0.26
TVP23A-201ENST00000299866 C9orf84Q5VXU9 1444 aa16.69■□□□□ 0.26
TVP23A-201ENST00000299866 EIF3AQ14152 1382 aaKnown RBP16.69■□□□□ 0.26
TVP23A-201ENST00000299866 TBC1D2Q9BYX2 928 aa16.69■□□□□ 0.26
TVP23A-201ENST00000299866 CCDC144AA2RUR9 1427 aa16.68■□□□□ 0.26
TVP23A-201ENST00000299866 MAPK8IP3Q9UPT6 1336 aa16.68■□□□□ 0.26
TVP23A-201ENST00000299866 HSP90AA2PQ14568 343 aaPredicted RBP16.68■□□□□ 0.26
TVP23A-201ENST00000299866 HSP90AA1P07900 732 aaKnown RBP16.68■□□□□ 0.26
TVP23A-201ENST00000299866 CLUAP1Q96AJ1 413 aa16.68■□□□□ 0.26
TVP23A-201ENST00000299866 DMRT2Q9Y5R5 561 aa16.66■□□□□ 0.26
TVP23A-201ENST00000299866 CEP170Q5SW79 1584 aa16.66■□□□□ 0.26
TVP23A-201ENST00000299866 ZMYND15Q9H091 742 aa16.66■□□□□ 0.26
TVP23A-201ENST00000299866 RAPGEF6Q8TEU7 1601 aa16.65■□□□□ 0.26
TVP23A-201ENST00000299866 DISP1Q96F81 1524 aa16.65■□□□□ 0.26
TVP23A-201ENST00000299866 CGNL1Q0VF96 1302 aa16.65■□□□□ 0.26
TVP23A-201ENST00000299866 MCM4P33991 863 aa16.65■□□□□ 0.26
TVP23A-201ENST00000299866 KDM5DQ9BY66 1539 aa16.65■□□□□ 0.26
TVP23A-201ENST00000299866 TRMT2AQ8IZ69 625 aaKnown RBP16.64■□□□□ 0.26
TVP23A-201ENST00000299866 CLCN1P35523 988 aa16.64■□□□□ 0.25
TVP23A-201ENST00000299866 NKTRP30414 1462 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms