RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 PTPRMP28827 1452 aa16.03■□□□□ 0.16
VWA3A-201ENST00000299840 RRBP1Q9P2E9 1410 aaKnown RBP16.02■□□□□ 0.16
VWA3A-201ENST00000299840 ADGRL2O95490 1459 aa16.02■□□□□ 0.15
VWA3A-201ENST00000299840 DUOX2Q9NRD8 1548 aa16.01■□□□□ 0.15
VWA3A-201ENST00000299840 MROH2AA6NES4 1674 aa16.01■□□□□ 0.15
VWA3A-201ENST00000299840 FAM50AQ14320 339 aaKnown RBP16■□□□□ 0.15
VWA3A-201ENST00000299840 FAM135AQ9P2D6 1515 aa15.99■□□□□ 0.15
VWA3A-201ENST00000299840 MLECQ14165 292 aa15.99■□□□□ 0.15
VWA3A-201ENST00000299840 PPP6R1Q9UPN7 881 aa15.99■□□□□ 0.15
VWA3A-201ENST00000299840 RNF17Q9BXT8 1623 aaKnown RBP15.99■□□□□ 0.15
VWA3A-201ENST00000299840 CNTLNQ9NXG0 1405 aa15.98■□□□□ 0.15
VWA3A-201ENST00000299840 ANKRD30AQ9BXX3 1397 aa15.98■□□□□ 0.15
VWA3A-201ENST00000299840 NCOA1Q15788 1441 aa15.97■□□□□ 0.15
VWA3A-201ENST00000299840 ERBINQ96RT1 1412 aa15.96■□□□□ 0.15
VWA3A-201ENST00000299840 KIF15Q9NS87 1388 aa15.96■□□□□ 0.15
VWA3A-201ENST00000299840 ANO8Q9HCE9 1232 aaPredicted RBP15.96■□□□□ 0.15
VWA3A-201ENST00000299840 C3P01024 1663 aa15.96■□□□□ 0.14
VWA3A-201ENST00000299840 SETD1BQ9UPS6 1966 aaKnown RBP15.95■□□□□ 0.14
VWA3A-201ENST00000299840 CLTCQ00610 1675 aaKnown RBP15.95■□□□□ 0.14
VWA3A-201ENST00000299840 PTPRKQ15262 1439 aa15.95■□□□□ 0.14
VWA3A-201ENST00000299840 ROCK1Q13464 1354 aa15.94■□□□□ 0.14
VWA3A-201ENST00000299840 KIF3BO15066 747 aa15.93■□□□□ 0.14
VWA3A-201ENST00000299840 DEPDC5O75140 1603 aa15.93■□□□□ 0.14
VWA3A-201ENST00000299840 MROH1Q8NDA8 1641 aa15.93■□□□□ 0.14
VWA3A-201ENST00000299840 ZC3H13Q5T200 1668 aaKnown RBP15.92■□□□□ 0.14
VWA3A-201ENST00000299840 RRP7BPQ9NSQ0 103 aa15.92■□□□□ 0.14
VWA3A-201ENST00000299840 CHIC2Q9UKJ5 165 aa15.92■□□□□ 0.14
VWA3A-201ENST00000299840 KDM5DQ9BY66 1539 aa15.91■□□□□ 0.14
VWA3A-201ENST00000299840 ZEB1P37275 1124 aaPredicted RBP15.91■□□□□ 0.14
VWA3A-201ENST00000299840 GGT6Q6P531 493 aa15.91■□□□□ 0.14
VWA3A-201ENST00000299840 ESF1Q9H501 851 aaKnown RBP15.91■□□□□ 0.14
VWA3A-201ENST00000299840 PRDM15P57071 1507 aaPredicted RBP15.89■□□□□ 0.13
VWA3A-201ENST00000299840 ZMYM3Q14202 1370 aa15.88■□□□□ 0.13
VWA3A-201ENST00000299840 PREX1Q8TCU6 1659 aa15.87■□□□□ 0.13
VWA3A-201ENST00000299840 NPATQ14207 1427 aa15.86■□□□□ 0.13
VWA3A-201ENST00000299840 CEP152O94986 1710 aa15.86■□□□□ 0.13
VWA3A-201ENST00000299840 ABCC3O15438 1527 aa15.86■□□□□ 0.13
VWA3A-201ENST00000299840 ANKRD50Q9ULJ7 1429 aa15.86■□□□□ 0.13
VWA3A-201ENST00000299840 VWDEQ8N2E2 1590 aa15.86■□□□□ 0.13
VWA3A-201ENST00000299840 CEBPAP49715 358 aaPredicted RBP15.84■□□□□ 0.13
VWA3A-201ENST00000299840 PODXL2Q9NZ53 605 aa15.84■□□□□ 0.13
VWA3A-201ENST00000299840 GCC2Q8IWJ2 1684 aa15.84■□□□□ 0.13
VWA3A-201ENST00000299840 UNC13BO14795 1591 aa15.84■□□□□ 0.13
VWA3A-201ENST00000299840 CAMSAP1Q5T5Y3 1602 aa15.83■□□□□ 0.12
VWA3A-201ENST00000299840 WASHC2CQ9Y4E1 1318 aa15.83■□□□□ 0.12
VWA3A-201ENST00000299840 LMTK2Q8IWU2 1503 aa15.83■□□□□ 0.12
VWA3A-201ENST00000299840 PZPP20742 1482 aa15.82■□□□□ 0.12
VWA3A-201ENST00000299840 LMTK3Q96Q04 1460 aa15.81■□□□□ 0.12
VWA3A-201ENST00000299840 ITGAEP38570 1179 aa15.81■□□□□ 0.12
VWA3A-201ENST00000299840 KANK1Q14678 1352 aa15.8■□□□□ 0.12
VWA3A-201ENST00000299840 ARHGAP31Q2M1Z3 1444 aa15.79■□□□□ 0.12
VWA3A-201ENST00000299840 ZNF142P52746 1687 aaPredicted RBP15.78■□□□□ 0.12
VWA3A-201ENST00000299840 NAIPQ13075 1403 aa15.78■□□□□ 0.12
VWA3A-201ENST00000299840 PLPPR3Q6T4P5 718 aa15.77■□□□□ 0.12
VWA3A-201ENST00000299840 CFAP65Q6ZU64 1925 aaKnown RBP15.77■□□□□ 0.12
VWA3A-201ENST00000299840 HFM1A2PYH4 1435 aa15.77■□□□□ 0.12
VWA3A-201ENST00000299840 IQGAP3Q86VI3 1631 aa15.77■□□□□ 0.11
VWA3A-201ENST00000299840 MYO3AQ8NEV4 1616 aa15.77■□□□□ 0.11
VWA3A-201ENST00000299840 UHRF1BP1Q6BDS2 1440 aa15.77■□□□□ 0.11
VWA3A-201ENST00000299840 SPATA31D1Q6ZQQ2 1576 aa15.77■□□□□ 0.11
VWA3A-201ENST00000299840 TET3O43151 1660 aa15.76■□□□□ 0.11
VWA3A-201ENST00000299840 EFCAB6Q5THR3 1501 aa15.74■□□□□ 0.11
VWA3A-201ENST00000299840 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.74■□□□□ 0.11
VWA3A-201ENST00000299840 ERVK-7P63135 1459 aa15.74■□□□□ 0.11
VWA3A-201ENST00000299840 TNRQ92752 1358 aa15.72■□□□□ 0.11
VWA3A-201ENST00000299840 CEP170BQ9Y4F5 1589 aaPredicted RBP15.72■□□□□ 0.11
VWA3A-201ENST00000299840 FBXO31Q5XUX0 539 aaPredicted RBP15.71■□□□□ 0.11
VWA3A-201ENST00000299840 RPRD2Q5VT52 1461 aaKnown RBP15.71■□□□□ 0.11
VWA3A-201ENST00000299840 NLRP1Q9C000 1473 aa15.71■□□□□ 0.11
VWA3A-201ENST00000299840 A2ML1A8K2U0 1454 aa15.7■□□□□ 0.1
VWA3A-201ENST00000299840 PKNOX2Q96KN3 472 aa15.7■□□□□ 0.1
VWA3A-201ENST00000299840 E9PCH4 1651 aa15.69■□□□□ 0.1
VWA3A-201ENST00000299840 NOS1P29475 1434 aa15.68■□□□□ 0.1
VWA3A-201ENST00000299840 STRCQ7RTU9 1775 aa15.68■□□□□ 0.1
VWA3A-201ENST00000299840 NUP155O75694 1391 aa15.68■□□□□ 0.1
VWA3A-201ENST00000299840 KDM5AP29375 1690 aaKnown RBP15.66■□□□□ 0.1
VWA3A-201ENST00000299840 HSPA2P54652 639 aa15.65■□□□□ 0.1
VWA3A-201ENST00000299840 SYNMO15061 1565 aa15.65■□□□□ 0.1
VWA3A-201ENST00000299840 PLA2R1Q13018 1463 aa15.65■□□□□ 0.1
VWA3A-201ENST00000299840 UBR1Q8IWV7 1749 aa15.64■□□□□ 0.09
VWA3A-201ENST00000299840 SETD5Q9C0A6 1442 aa15.63■□□□□ 0.09
VWA3A-201ENST00000299840 UGGT1Q9NYU2 1555 aa15.62■□□□□ 0.09
VWA3A-201ENST00000299840 PIK3C2BO00750 1634 aa15.62■□□□□ 0.09
VWA3A-201ENST00000299840 SPHKAPQ2M3C7 1700 aa15.61■□□□□ 0.09
VWA3A-201ENST00000299840 POLR1AO95602 1720 aaPredicted RBP15.6■□□□□ 0.09
VWA3A-201ENST00000299840 THEMISQ8N1K5 641 aaPredicted RBP15.59■□□□□ 0.09
VWA3A-201ENST00000299840 SLC52A1Q9NWF4 448 aa15.59■□□□□ 0.09
VWA3A-201ENST00000299840 PTPRTO14522 1441 aa15.58■□□□□ 0.09
VWA3A-201ENST00000299840 PKD2Q13563 968 aa15.57■□□□□ 0.08
VWA3A-201ENST00000299840 DMRT2Q9Y5R5 561 aa15.57■□□□□ 0.08
VWA3A-201ENST00000299840 TRIM52Q96A61 297 aa15.56■□□□□ 0.08
VWA3A-201ENST00000299840 ADGRB3O60242 1522 aa15.56■□□□□ 0.08
VWA3A-201ENST00000299840 SLIT1O75093 1534 aa15.56■□□□□ 0.08
VWA3A-201ENST00000299840 MYO5BQ9ULV0 1848 aa15.56■□□□□ 0.08
VWA3A-201ENST00000299840 IDI1Q13907 227 aa15.56■□□□□ 0.08
VWA3A-201ENST00000299840 ARHGAP23Q9P227 1491 aa15.56■□□□□ 0.08
VWA3A-201ENST00000299840 SALL2Q9Y467 1007 aaPredicted RBP15.55■□□□□ 0.08
VWA3A-201ENST00000299840 RAB3GAP2Q9H2M9 1393 aa15.55■□□□□ 0.08
VWA3A-201ENST00000299840 TMEM131LA2VDJ0 1609 aa15.54■□□□□ 0.08
VWA3A-201ENST00000299840 NEURL4Q96JN8 1562 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms