RNA–Protein interactions for RNA: ENST00000298910.11

LRRK2-201, Transcript of leucine rich repeat kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRK2, Length 9,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-201ENST00000298910 AKNAQ7Z591 1439 aa7.65□□□□□ -1.19
LRRK2-201ENST00000298910 ADAMTS12P58397 1594 aa7.65□□□□□ -1.19
LRRK2-201ENST00000298910 SAMD9Q5K651 1589 aa7.64□□□□□ -1.19
LRRK2-201ENST00000298910 KIF3BO15066 747 aa7.64□□□□□ -1.19
LRRK2-201ENST00000298910 STAC3Q96MF2 364 aa7.64□□□□□ -1.19
LRRK2-201ENST00000298910 TNNT2P45379 298 aaPredicted RBP7.64□□□□□ -1.19
LRRK2-201ENST00000298910 NEUROD2Q15784 382 aa7.63□□□□□ -1.19
LRRK2-201ENST00000298910 PRG4Q92954 1404 aaPredicted RBP7.63□□□□□ -1.19
LRRK2-201ENST00000298910 FRAT1Q92837 279 aaPredicted RBP7.62□□□□□ -1.19
LRRK2-201ENST00000298910 BRD4O60885 1362 aaPredicted RBP7.62□□□□□ -1.19
LRRK2-201ENST00000298910 SRPK2P78362 688 aaKnown RBP7.62□□□□□ -1.19
LRRK2-201ENST00000298910 GGT6Q6P531 493 aa7.62□□□□□ -1.19
LRRK2-201ENST00000298910 PANK3Q9H999 370 aa7.62□□□□□ -1.19
LRRK2-201ENST00000298910 KIAA0556O60303 1618 aa7.62□□□□□ -1.19
LRRK2-201ENST00000298910 RGS3P49796 1198 aa7.62□□□□□ -1.19
LRRK2-201ENST00000298910 GOLGA2Q08379 1002 aa7.62□□□□□ -1.19
LRRK2-201ENST00000298910 WDR62O43379 1518 aa7.61□□□□□ -1.19
LRRK2-201ENST00000298910 HDGFP51858 240 aaKnown RBP7.61□□□□□ -1.19
LRRK2-201ENST00000298910 DNMT1P26358 1616 aaKnown RBP7.61□□□□□ -1.19
LRRK2-201ENST00000298910 U2SURPO15042 1029 aaKnown RBP7.61□□□□□ -1.19
LRRK2-201ENST00000298910 RPRD2Q5VT52 1461 aaKnown RBP7.6□□□□□ -1.19
LRRK2-201ENST00000298910 SENP3Q9H4L4 574 aaPredicted RBP7.6□□□□□ -1.19
LRRK2-201ENST00000298910 CCDC141Q6ZP82 1450 aa7.6□□□□□ -1.19
LRRK2-201ENST00000298910 ABCC5O15440 1437 aa7.6□□□□□ -1.19
LRRK2-201ENST00000298910 CASC1Q6TDU7 716 aa7.59□□□□□ -1.19
LRRK2-201ENST00000298910 ANKRD30BQ9BXX2 1392 aa7.59□□□□□ -1.19
LRRK2-201ENST00000298910 RRP1P56182 461 aaKnown RBP7.59□□□□□ -1.19
LRRK2-201ENST00000298910 HDGFL2Q7Z4V5 671 aaPredicted RBP7.59□□□□□ -1.19
LRRK2-201ENST00000298910 ARHGEF11O15085 1522 aa7.59□□□□□ -1.19
LRRK2-201ENST00000298910 FANCIQ9NVI1 1328 aa7.59□□□□□ -1.19
LRRK2-201ENST00000298910 WASHC2CQ9Y4E1 1318 aa7.59□□□□□ -1.19
LRRK2-201ENST00000298910 EIF4G3O43432 1585 aaKnown RBP7.58□□□□□ -1.2
LRRK2-201ENST00000298910 PLPPR3Q6T4P5 718 aa7.58□□□□□ -1.2
LRRK2-201ENST00000298910 NGEFQ8N5V2 710 aa7.58□□□□□ -1.2
LRRK2-201ENST00000298910 LAS1LQ9Y4W2 734 aaKnown RBP7.58□□□□□ -1.2
LRRK2-201ENST00000298910 CALD1Q05682 793 aaKnown RBP7.58□□□□□ -1.2
LRRK2-201ENST00000298910 TCOF1Q13428 1488 aaKnown RBP7.58□□□□□ -1.2
LRRK2-201ENST00000298910 IPO9Q96P70 1041 aaKnown RBP7.58□□□□□ -1.2
LRRK2-201ENST00000298910 PLB1Q6P1J6 1458 aa7.58□□□□□ -1.2
LRRK2-201ENST00000298910 GOLGA6L22H0YM25 854 aa7.57□□□□□ -1.2
LRRK2-201ENST00000298910 IPO8O15397 1037 aaKnown RBP7.57□□□□□ -1.2
LRRK2-201ENST00000298910 PMFBP1Q8TBY8 1022 aa7.57□□□□□ -1.2
LRRK2-201ENST00000298910 TERF2IPQ9NYB0 399 aa7.57□□□□□ -1.2
LRRK2-201ENST00000298910 NCOA1Q15788 1441 aa7.57□□□□□ -1.2
LRRK2-201ENST00000298910 HAP1P54257 671 aaPredicted RBP7.57□□□□□ -1.2
LRRK2-201ENST00000298910 MYO5CQ9NQX4 1742 aa7.56□□□□□ -1.2
LRRK2-201ENST00000298910 CFAP44Q96MT7 982 aa7.56□□□□□ -1.2
LRRK2-201ENST00000298910 TARBP1Q13395 1621 aaKnown RBP7.56□□□□□ -1.2
LRRK2-201ENST00000298910 STK26Q9P289 416 aa7.56□□□□□ -1.2
LRRK2-201ENST00000298910 U2AF1L5P0DN76 240 aaPredicted RBP7.56□□□□□ -1.2
LRRK2-201ENST00000298910 U2AF1Q01081 240 aaKnown RBP eCLIP7.56□□□□□ -1.2
LRRK2-201ENST00000298910 NBPF8Q3BBV2 869 aa7.56□□□□□ -1.2
LRRK2-201ENST00000298910 CENPQQ7L2Z9 268 aaPredicted RBP7.56□□□□□ -1.2
LRRK2-201ENST00000298910 CGNL1Q0VF96 1302 aa7.56□□□□□ -1.2
LRRK2-201ENST00000298910 ZNF608Q9ULD9 1512 aaPredicted RBP7.56□□□□□ -1.2
LRRK2-201ENST00000298910 EIF2AK4Q9P2K8 1649 aaKnown RBP7.56□□□□□ -1.2
LRRK2-201ENST00000298910 POLR1AO95602 1720 aaPredicted RBP7.55□□□□□ -1.2
LRRK2-201ENST00000298910 SAFB2Q14151 953 aaKnown RBP eCLIP7.55□□□□□ -1.2
LRRK2-201ENST00000298910 CENPJQ9HC77 1338 aaPredicted RBP7.55□□□□□ -1.2
LRRK2-201ENST00000298910 E9PSI1 815 aa7.55□□□□□ -1.2
LRRK2-201ENST00000298910 EVC2Q86UK5 1308 aa7.55□□□□□ -1.2
LRRK2-201ENST00000298910 RWDD1Q9H446 243 aaPredicted RBP7.54□□□□□ -1.2
LRRK2-201ENST00000298910 VGFO15240 615 aaPredicted RBP7.54□□□□□ -1.2
LRRK2-201ENST00000298910 GPATCH8Q9UKJ3 1502 aaKnown RBP7.54□□□□□ -1.2
LRRK2-201ENST00000298910 CCDC146Q8IYE0 955 aa7.54□□□□□ -1.2
LRRK2-201ENST00000298910 SMG6Q86US8 1419 aaKnown RBP7.54□□□□□ -1.2
LRRK2-201ENST00000298910 SCAPERQ9BY12 1400 aa7.54□□□□□ -1.2
LRRK2-201ENST00000298910 DEKP35659 375 aaKnown RBP7.54□□□□□ -1.2
LRRK2-201ENST00000298910 FAM135AQ9P2D6 1515 aa7.53□□□□□ -1.2
LRRK2-201ENST00000298910 TRAK1Q9UPV9 953 aa7.53□□□□□ -1.2
LRRK2-201ENST00000298910 C14orf37Q86TY3 774 aa7.53□□□□□ -1.2
LRRK2-201ENST00000298910 ERBINQ96RT1 1412 aa7.53□□□□□ -1.2
LRRK2-201ENST00000298910 NUP153P49790 1475 aaKnown RBP7.53□□□□□ -1.2
LRRK2-201ENST00000298910 PTPRKQ15262 1439 aa7.53□□□□□ -1.2
LRRK2-201ENST00000298910 HSCBQ8IWL3 235 aa7.52□□□□□ -1.21
LRRK2-201ENST00000298910 ARXQ96QS3 562 aa7.52□□□□□ -1.21
LRRK2-201ENST00000298910 HSP90AB1P08238 724 aaKnown RBP7.52□□□□□ -1.21
LRRK2-201ENST00000298910 KIF1BO60333 1816 aa7.52□□□□□ -1.21
LRRK2-201ENST00000298910 TRIM44Q96DX7 344 aaPredicted RBP7.52□□□□□ -1.21
LRRK2-201ENST00000298910 LRRIQ1Q96JM4 1722 aa7.51□□□□□ -1.21
LRRK2-201ENST00000298910 CRBNQ96SW2 442 aa7.51□□□□□ -1.21
LRRK2-201ENST00000298910 PNISRQ8TF01 805 aaKnown RBP7.51□□□□□ -1.21
LRRK2-201ENST00000298910 SMC4Q9NTJ3 1288 aa7.51□□□□□ -1.21
LRRK2-201ENST00000298910 EXOC6Q8TAG9 804 aa7.51□□□□□ -1.21
LRRK2-201ENST00000298910 USP35Q9P2H5 1018 aa7.51□□□□□ -1.21
LRRK2-201ENST00000298910 RALGAPBQ86X10 1494 aa7.5□□□□□ -1.21
LRRK2-201ENST00000298910 CDC42BPAQ5VT25 1732 aa7.5□□□□□ -1.21
LRRK2-201ENST00000298910 KAT6BQ8WYB5 2073 aa7.5□□□□□ -1.21
LRRK2-201ENST00000298910 DUOX2Q9NRD8 1548 aa7.5□□□□□ -1.21
LRRK2-201ENST00000298910 NCLP19338 710 aaKnown RBP7.5□□□□□ -1.21
LRRK2-201ENST00000298910 PDE4AP27815 886 aa7.5□□□□□ -1.21
LRRK2-201ENST00000298910 ITPRIPQ8IWB1 547 aa7.5□□□□□ -1.21
LRRK2-201ENST00000298910 SHANK2Q9UPX8 1470 aa7.5□□□□□ -1.21
LRRK2-201ENST00000298910 LMOD3Q0VAK6 560 aa7.5□□□□□ -1.21
LRRK2-201ENST00000298910 FAM161AQ3B820 660 aa7.5□□□□□ -1.21
LRRK2-201ENST00000298910 MLECQ14165 292 aa7.49□□□□□ -1.21
LRRK2-201ENST00000298910 OSCARQ8IYS5 282 aa7.49□□□□□ -1.21
LRRK2-201ENST00000298910 ARHGEF12Q9NZN5 1544 aa7.49□□□□□ -1.21
LRRK2-201ENST00000298910 PLIN1O60240 522 aa7.49□□□□□ -1.21
LRRK2-201ENST00000298910 RTF1Q92541 710 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms