RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 PKD2Q13563 968 aa26.88■■□□□ 1.89
SEC61A2-201ENST00000298428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.88■■□□□ 1.89
SEC61A2-201ENST00000298428 ABCA6Q8N139 1617 aa26.88■■□□□ 1.89
SEC61A2-201ENST00000298428 A2MP01023 1474 aa26.87■■□□□ 1.89
SEC61A2-201ENST00000298428 ANKRD30BQ9BXX2 1392 aa26.87■■□□□ 1.89
SEC61A2-201ENST00000298428 IQGAP3Q86VI3 1631 aa26.87■■□□□ 1.89
SEC61A2-201ENST00000298428 TIMELESSQ9UNS1 1208 aa26.85■■□□□ 1.89
SEC61A2-201ENST00000298428 DEPDC5O75140 1603 aa26.85■■□□□ 1.89
SEC61A2-201ENST00000298428 ZMYM4Q5VZL5 1548 aa26.85■■□□□ 1.89
SEC61A2-201ENST00000298428 DIP2CQ9Y2E4 1556 aa26.82■■□□□ 1.88
SEC61A2-201ENST00000298428 KIF3BO15066 747 aa26.82■■□□□ 1.88
SEC61A2-201ENST00000298428 TONSLQ96HA7 1378 aa26.8■■□□□ 1.88
SEC61A2-201ENST00000298428 YEATS2Q9ULM3 1422 aa26.78■■□□□ 1.88
SEC61A2-201ENST00000298428 PRDM15P57071 1507 aaPredicted RBP26.77■■□□□ 1.88
SEC61A2-201ENST00000298428 KANK1Q14678 1352 aa26.75■■□□□ 1.87
SEC61A2-201ENST00000298428 MROH1Q8NDA8 1641 aa26.75■■□□□ 1.87
SEC61A2-201ENST00000298428 RPRD2Q5VT52 1461 aaKnown RBP26.75■■□□□ 1.87
SEC61A2-201ENST00000298428 COL17A1Q9UMD9 1497 aaPredicted RBP26.75■■□□□ 1.87
SEC61A2-201ENST00000298428 TRHP20396 242 aaPredicted RBP26.74■■□□□ 1.87
SEC61A2-201ENST00000298428 RNF17Q9BXT8 1623 aaKnown RBP26.74■■□□□ 1.87
SEC61A2-201ENST00000298428 BCORL1Q5H9F3 1711 aa26.74■■□□□ 1.87
SEC61A2-201ENST00000298428 VWDEQ8N2E2 1590 aa26.74■■□□□ 1.87
SEC61A2-201ENST00000298428 TET3O43151 1660 aa26.68■■□□□ 1.86
SEC61A2-201ENST00000298428 ATP10AO60312 1499 aa26.67■■□□□ 1.86
SEC61A2-201ENST00000298428 PPP1R15AO75807 674 aaPredicted RBP26.66■■□□□ 1.86
SEC61A2-201ENST00000298428 E9PCH4 1651 aa26.64■■□□□ 1.86
SEC61A2-201ENST00000298428 GGT6Q6P531 493 aa26.64■■□□□ 1.85
SEC61A2-201ENST00000298428 REREQ9P2R6 1566 aa26.63■■□□□ 1.85
SEC61A2-201ENST00000298428 LMTK2Q8IWU2 1503 aa26.62■■□□□ 1.85
SEC61A2-201ENST00000298428 ARHGEF40Q8TER5 1519 aa26.62■■□□□ 1.85
SEC61A2-201ENST00000298428 PLA2R1Q13018 1463 aa26.62■■□□□ 1.85
SEC61A2-201ENST00000298428 L3MBTL2Q969R5 705 aa26.59■■□□□ 1.85
SEC61A2-201ENST00000298428 CCDC144AA2RUR9 1427 aa26.59■■□□□ 1.85
SEC61A2-201ENST00000298428 CEP152O94986 1710 aa26.59■■□□□ 1.85
SEC61A2-201ENST00000298428 EFCAB6Q5THR3 1501 aa26.58■■□□□ 1.85
SEC61A2-201ENST00000298428 ABCC3O15438 1527 aa26.55■■□□□ 1.84
SEC61A2-201ENST00000298428 AGLP35573 1532 aa26.55■■□□□ 1.84
SEC61A2-201ENST00000298428 WASHC2CQ9Y4E1 1318 aa26.54■■□□□ 1.84
SEC61A2-201ENST00000298428 SPHKAPQ2M3C7 1700 aa26.53■■□□□ 1.84
SEC61A2-201ENST00000298428 TRPM2O94759 1503 aa26.53■■□□□ 1.84
SEC61A2-201ENST00000298428 PTPRTO14522 1441 aa26.53■■□□□ 1.84
SEC61A2-201ENST00000298428 ZNF316A6NFI3 1004 aaPredicted RBP26.51■■□□□ 1.83
SEC61A2-201ENST00000298428 ZC3H13Q5T200 1668 aaKnown RBP26.5■■□□□ 1.83
SEC61A2-201ENST00000298428 SIGLEC1Q9BZZ2 1709 aa26.49■■□□□ 1.83
SEC61A2-201ENST00000298428 CAMSAP1Q5T5Y3 1602 aa26.48■■□□□ 1.83
SEC61A2-201ENST00000298428 NPATQ14207 1427 aa26.47■■□□□ 1.83
SEC61A2-201ENST00000298428 CLTCL1P53675 1640 aa26.43■■□□□ 1.82
SEC61A2-201ENST00000298428 PPP6R1Q9UPN7 881 aa26.4■■□□□ 1.82
SEC61A2-201ENST00000298428 ARHGAP31Q2M1Z3 1444 aa26.4■■□□□ 1.82
SEC61A2-201ENST00000298428 NBPF8Q3BBV2 869 aa26.38■■□□□ 1.81
SEC61A2-201ENST00000298428 RGL3Q3MIN7 710 aa26.37■■□□□ 1.81
SEC61A2-201ENST00000298428 SPATA31E1Q6ZUB1 1445 aa26.37■■□□□ 1.81
SEC61A2-201ENST00000298428 DCAF11Q8TEB1 546 aa26.36■■□□□ 1.81
SEC61A2-201ENST00000298428 CNTLNQ9NXG0 1405 aa26.36■■□□□ 1.81
SEC61A2-201ENST00000298428 MLECQ14165 292 aa26.36■■□□□ 1.81
SEC61A2-201ENST00000298428 UGGT1Q9NYU2 1555 aa26.36■■□□□ 1.81
SEC61A2-201ENST00000298428 UHRF1BP1Q6BDS2 1440 aa26.34■■□□□ 1.81
SEC61A2-201ENST00000298428 CFAP65Q6ZU64 1925 aaKnown RBP26.34■■□□□ 1.81
SEC61A2-201ENST00000298428 ARID4BQ4LE39 1312 aaPredicted RBP26.34■■□□□ 1.81
SEC61A2-201ENST00000298428 NOS1P29475 1434 aa26.33■■□□□ 1.8
SEC61A2-201ENST00000298428 ZNF326Q5BKZ1 582 aaKnown RBP26.32■■□□□ 1.8
SEC61A2-201ENST00000298428 KDM2AQ9Y2K7 1162 aa26.32■■□□□ 1.8
SEC61A2-201ENST00000298428 CLTCQ00610 1675 aaKnown RBP26.32■■□□□ 1.8
SEC61A2-201ENST00000298428 NEURL4Q96JN8 1562 aa26.31■■□□□ 1.8
SEC61A2-201ENST00000298428 KIF1BO60333 1816 aa26.29■■□□□ 1.8
SEC61A2-201ENST00000298428 SYNMO15061 1565 aa26.27■■□□□ 1.8
SEC61A2-201ENST00000298428 PREX1Q8TCU6 1659 aa26.27■■□□□ 1.8
SEC61A2-201ENST00000298428 ESF1Q9H501 851 aaKnown RBP26.25■■□□□ 1.79
SEC61A2-201ENST00000298428 PRAG1Q86YV5 1406 aa26.25■■□□□ 1.79
SEC61A2-201ENST00000298428 PIK3C2BO00750 1634 aa26.24■■□□□ 1.79
SEC61A2-201ENST00000298428 RALGAPBQ86X10 1494 aa26.24■■□□□ 1.79
SEC61A2-201ENST00000298428 ADGRB3O60242 1522 aa26.23■■□□□ 1.79
SEC61A2-201ENST00000298428 MROH2AA6NES4 1674 aa26.22■■□□□ 1.79
SEC61A2-201ENST00000298428 ERVK-7P63135 1459 aa26.22■■□□□ 1.79
SEC61A2-201ENST00000298428 EIF4G2P78344 907 aaKnown RBP eCLIP26.19■■□□□ 1.78
SEC61A2-201ENST00000298428 HIRIP3Q9BW71 556 aaPredicted RBP26.19■■□□□ 1.78
SEC61A2-201ENST00000298428 FBXO31Q5XUX0 539 aaPredicted RBP26.19■■□□□ 1.78
SEC61A2-201ENST00000298428 DIEXFQ68CQ4 756 aaKnown RBP26.19■■□□□ 1.78
SEC61A2-201ENST00000298428 STAC3Q96MF2 364 aa26.19■■□□□ 1.78
SEC61A2-201ENST00000298428 CHGAP10645 457 aaKnown RBP26.18■■□□□ 1.78
SEC61A2-201ENST00000298428 SLC52A1Q9NWF4 448 aa26.18■■□□□ 1.78
SEC61A2-201ENST00000298428 ZMYM3Q14202 1370 aa26.17■■□□□ 1.78
SEC61A2-201ENST00000298428 HSPA5P11021 654 aaKnown RBP26.17■■□□□ 1.78
SEC61A2-201ENST00000298428 TRPM1Q7Z4N2 1603 aa26.16■■□□□ 1.78
SEC61A2-201ENST00000298428 SPATA31D1Q6ZQQ2 1576 aa26.16■■□□□ 1.78
SEC61A2-201ENST00000298428 IDI1Q13907 227 aa26.15■■□□□ 1.78
SEC61A2-201ENST00000298428 MADDQ8WXG6 1647 aa26.14■■□□□ 1.78
SEC61A2-201ENST00000298428 IFT172Q9UG01 1749 aa26.13■■□□□ 1.77
SEC61A2-201ENST00000298428 ROCK2O75116 1388 aaKnown RBP26.13■■□□□ 1.77
SEC61A2-201ENST00000298428 MYOM2P54296 1465 aa26.12■■□□□ 1.77
SEC61A2-201ENST00000298428 CARD11Q9BXL7 1154 aa26.11■■□□□ 1.77
SEC61A2-201ENST00000298428 USP47Q96K76 1375 aa26.09■■□□□ 1.77
SEC61A2-201ENST00000298428 RPGRIP1LQ68CZ1 1315 aa26.08■■□□□ 1.76
SEC61A2-201ENST00000298428 FER1L4A9Z1Z3 1794 aa26.07■■□□□ 1.76
SEC61A2-201ENST00000298428 PPLO60437 1756 aa26.07■■□□□ 1.76
SEC61A2-201ENST00000298428 GPRASP1Q5JY77 1395 aa26.07■■□□□ 1.76
SEC61A2-201ENST00000298428 TMEM131LA2VDJ0 1609 aa26.06■■□□□ 1.76
SEC61A2-201ENST00000298428 NBPF1Q3BBV0 1214 aa26.05■■□□□ 1.76
SEC61A2-201ENST00000298428 LAMC1P11047 1609 aa26.04■■□□□ 1.76
SEC61A2-201ENST00000298428 ADGRF5Q8IZF2 1346 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms