RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 EIF2AK4Q9P2K8 1649 aaKnown RBP36.16■■■■□ 3.38
GTF2A1-201ENST00000298173 YEATS2Q9ULM3 1422 aa36.13■■■■□ 3.37
GTF2A1-201ENST00000298173 SLC4A1APQ9BWU0 796 aaKnown RBP36.13■■■■□ 3.37
GTF2A1-201ENST00000298173 DEPDC5O75140 1603 aa36.1■■■■□ 3.37
GTF2A1-201ENST00000298173 BCORL1Q5H9F3 1711 aa36.06■■■■□ 3.36
GTF2A1-201ENST00000298173 IQGAP3Q86VI3 1631 aa36.06■■■■□ 3.36
GTF2A1-201ENST00000298173 FAM135AQ9P2D6 1515 aa36.05■■■■□ 3.36
GTF2A1-201ENST00000298173 KIF3BO15066 747 aa36.05■■■■□ 3.36
GTF2A1-201ENST00000298173 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.02■■■■□ 3.361e-7■■□□□ 12.8
GTF2A1-201ENST00000298173 ATP10AO60312 1499 aa36.02■■■■□ 3.36
GTF2A1-201ENST00000298173 MROH1Q8NDA8 1641 aa36■■■■□ 3.35
GTF2A1-201ENST00000298173 RNF17Q9BXT8 1623 aaKnown RBP35.99■■■■□ 3.35
GTF2A1-201ENST00000298173 PKD2Q13563 968 aa35.98■■■■□ 3.35
GTF2A1-201ENST00000298173 VWDEQ8N2E2 1590 aa35.98■■■■□ 3.35
GTF2A1-201ENST00000298173 REREQ9P2R6 1566 aa35.98■■■■□ 3.35
GTF2A1-201ENST00000298173 FOXD1Q16676 465 aa35.97■■■■□ 3.35
GTF2A1-201ENST00000298173 SIN3AQ96ST3 1273 aa35.97■■■■□ 3.35
GTF2A1-201ENST00000298173 PRDM15P57071 1507 aaPredicted RBP35.97■■■■□ 3.35
GTF2A1-201ENST00000298173 ANKRD30BQ9BXX2 1392 aa35.96■■■■□ 3.35
GTF2A1-201ENST00000298173 ARHGEF40Q8TER5 1519 aa35.93■■■■□ 3.34
GTF2A1-201ENST00000298173 KANK1Q14678 1352 aa35.88■■■■□ 3.34
GTF2A1-201ENST00000298173 AGLP35573 1532 aa35.87■■■■□ 3.33
GTF2A1-201ENST00000298173 NEUROD1Q13562 356 aa35.84■■■■□ 3.33
GTF2A1-201ENST00000298173 TET3O43151 1660 aa35.83■■■■□ 3.33
GTF2A1-201ENST00000298173 GGT6Q6P531 493 aa35.82■■■■□ 3.33
GTF2A1-201ENST00000298173 LMTK2Q8IWU2 1503 aa35.82■■■■□ 3.32
GTF2A1-201ENST00000298173 SIGLEC1Q9BZZ2 1709 aa35.82■■■■□ 3.32
GTF2A1-201ENST00000298173 TIMELESSQ9UNS1 1208 aa35.81■■■■□ 3.32
GTF2A1-201ENST00000298173 E9PCH4 1651 aa35.78■■■■□ 3.32
GTF2A1-201ENST00000298173 CEP152O94986 1710 aa35.74■■■■□ 3.31
GTF2A1-201ENST00000298173 RPRD2Q5VT52 1461 aaKnown RBP35.74■■■■□ 3.31
GTF2A1-201ENST00000298173 PLA2R1Q13018 1463 aa35.74■■■■□ 3.31
GTF2A1-201ENST00000298173 ABCC3O15438 1527 aa35.72■■■■□ 3.31
GTF2A1-201ENST00000298173 EFCAB6Q5THR3 1501 aa35.7■■■■□ 3.3
GTF2A1-201ENST00000298173 WASHC2CQ9Y4E1 1318 aa35.69■■■■□ 3.3
GTF2A1-201ENST00000298173 PPP6R1Q9UPN7 881 aa35.68■■■■□ 3.3
GTF2A1-201ENST00000298173 ZC3H13Q5T200 1668 aaKnown RBP35.67■■■■□ 3.3
GTF2A1-201ENST00000298173 PTPRTO14522 1441 aa35.65■■■■□ 3.3
GTF2A1-201ENST00000298173 TONSLQ96HA7 1378 aa35.64■■■■□ 3.3
GTF2A1-201ENST00000298173 CAMSAP1Q5T5Y3 1602 aa35.61■■■■□ 3.29
GTF2A1-201ENST00000298173 SPHKAPQ2M3C7 1700 aa35.6■■■■□ 3.29
GTF2A1-201ENST00000298173 NPATQ14207 1427 aa35.59■■■■□ 3.29
GTF2A1-201ENST00000298173 ARHGAP31Q2M1Z3 1444 aa35.58■■■■□ 3.29
GTF2A1-201ENST00000298173 CCDC144AA2RUR9 1427 aa35.57■■■■□ 3.29
GTF2A1-201ENST00000298173 PPP1R15AO75807 674 aaPredicted RBP35.57■■■■□ 3.28
GTF2A1-201ENST00000298173 TRPM2O94759 1503 aa35.57■■■■□ 3.28
GTF2A1-201ENST00000298173 L3MBTL2Q969R5 705 aa35.52■■■■□ 3.28
GTF2A1-201ENST00000298173 MLECQ14165 292 aa35.51■■■■□ 3.28
GTF2A1-201ENST00000298173 ARID4BQ4LE39 1312 aaPredicted RBP35.5■■■■□ 3.27
GTF2A1-201ENST00000298173 CFAP65Q6ZU64 1925 aaKnown RBP35.49■■■■□ 3.27
GTF2A1-201ENST00000298173 CLTCQ00610 1675 aaKnown RBP35.47■■■■□ 3.27
GTF2A1-201ENST00000298173 NOS1P29475 1434 aa35.45■■■■□ 3.27
GTF2A1-201ENST00000298173 CLTCL1P53675 1640 aa35.44■■■■□ 3.26
GTF2A1-201ENST00000298173 CNTLNQ9NXG0 1405 aa35.43■■■■□ 3.26
GTF2A1-201ENST00000298173 SPATA31E1Q6ZUB1 1445 aa35.38■■■■□ 3.25
GTF2A1-201ENST00000298173 PREX1Q8TCU6 1659 aa35.36■■■■□ 3.25
GTF2A1-201ENST00000298173 UGGT1Q9NYU2 1555 aa35.36■■■■□ 3.25
GTF2A1-201ENST00000298173 NEURL4Q96JN8 1562 aa35.35■■■■□ 3.25
GTF2A1-201ENST00000298173 SYNMO15061 1565 aa35.34■■■■□ 3.25
GTF2A1-201ENST00000298173 ZMYM3Q14202 1370 aa35.33■■■■□ 3.25
GTF2A1-201ENST00000298173 ESF1Q9H501 851 aaKnown RBP35.33■■■■□ 3.25
GTF2A1-201ENST00000298173 PIK3C2BO00750 1634 aa35.31■■■■□ 3.24
GTF2A1-201ENST00000298173 MROH2AA6NES4 1674 aa35.3■■■■□ 3.24
GTF2A1-201ENST00000298173 FBXO31Q5XUX0 539 aaPredicted RBP35.3■■■■□ 3.24
GTF2A1-201ENST00000298173 KIF1BO60333 1816 aa35.3■■■■□ 3.24
GTF2A1-201ENST00000298173 ERVK-7P63135 1459 aa35.29■■■■□ 3.24
GTF2A1-201ENST00000298173 RGL3Q3MIN7 710 aa35.28■■■■□ 3.24
GTF2A1-201ENST00000298173 SPATA31D1Q6ZQQ2 1576 aa35.26■■■■□ 3.23
GTF2A1-201ENST00000298173 NBPF8Q3BBV2 869 aa35.25■■■■□ 3.23
GTF2A1-201ENST00000298173 DCAF11Q8TEB1 546 aa35.25■■■■□ 3.23
GTF2A1-201ENST00000298173 SLC52A1Q9NWF4 448 aa35.25■■■■□ 3.23
GTF2A1-201ENST00000298173 UHRF1BP1Q6BDS2 1440 aa35.24■■■■□ 3.23
GTF2A1-201ENST00000298173 FER1L4A9Z1Z3 1794 aa35.22■■■■□ 3.23
GTF2A1-201ENST00000298173 IDI1Q13907 227 aa35.21■■■■□ 3.23
GTF2A1-201ENST00000298173 ADGRB3O60242 1522 aa35.19■■■■□ 3.22
GTF2A1-201ENST00000298173 KDM2AQ9Y2K7 1162 aa35.17■■■■□ 3.22
GTF2A1-201ENST00000298173 STAC3Q96MF2 364 aa35.16■■■■□ 3.22
GTF2A1-201ENST00000298173 ADAMTSL3P82987 1691 aa35.13■■■■□ 3.21
GTF2A1-201ENST00000298173 C3P01024 1663 aa35.12■■■■□ 3.21
GTF2A1-201ENST00000298173 PRAG1Q86YV5 1406 aa35.1■■■■□ 3.21
GTF2A1-201ENST00000298173 IFT172Q9UG01 1749 aa35.09■■■■□ 3.21
GTF2A1-201ENST00000298173 MADDQ8WXG6 1647 aa35.09■■■■□ 3.21
GTF2A1-201ENST00000298173 TMEM131LA2VDJ0 1609 aa35.08■■■■□ 3.21
GTF2A1-201ENST00000298173 CHGAP10645 457 aaKnown RBP35.07■■■■□ 3.2
GTF2A1-201ENST00000298173 ZNF316A6NFI3 1004 aaPredicted RBP35.06■■■■□ 3.2
GTF2A1-201ENST00000298173 RPGRIP1LQ68CZ1 1315 aa35.06■■■■□ 3.2
GTF2A1-201ENST00000298173 CEBPAP49715 358 aaPredicted RBP35.05■■■■□ 3.2
GTF2A1-201ENST00000298173 ZNF326Q5BKZ1 582 aaKnown RBP35.05■■■■□ 3.2
GTF2A1-201ENST00000298173 TNRQ92752 1358 aa35.04■■■■□ 3.2
GTF2A1-201ENST00000298173 MYO5BQ9ULV0 1848 aa35.03■■■■□ 3.2
GTF2A1-201ENST00000298173 PPLO60437 1756 aa35.02■■■■□ 3.2
GTF2A1-201ENST00000298173 MYOM2P54296 1465 aa35.02■■■■□ 3.2
GTF2A1-201ENST00000298173 RALGAPBQ86X10 1494 aa35.02■■■■□ 3.2
GTF2A1-201ENST00000298173 RIMS1Q86UR5 1692 aaKnown RBP35.01■■■■□ 3.19
GTF2A1-201ENST00000298173 TRPM1Q7Z4N2 1603 aa34.99■■■■□ 3.19
GTF2A1-201ENST00000298173 NRXN1Q9ULB1 1477 aa34.96■■■■□ 3.19
GTF2A1-201ENST00000298173 NEXMIFQ5QGS0 1516 aa34.96■■■■□ 3.19
GTF2A1-201ENST00000298173 A2ML1A8K2U0 1454 aa34.95■■■■□ 3.18
GTF2A1-201ENST00000298173 ADGRF5Q8IZF2 1346 aa34.93■■■■□ 3.18
GTF2A1-201ENST00000298173 KDM5AP29375 1690 aaKnown RBP34.93■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms