RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 CERKQ8TCT0 537 aa25.59■■□□□ 1.69
NPM1-201ENST00000296930 KDM5DQ9BY66 1539 aa25.58■■□□□ 1.69
NPM1-201ENST00000296930 CAMSAP1Q5T5Y3 1602 aa25.58■■□□□ 1.68
NPM1-201ENST00000296930 CEP170BQ9Y4F5 1589 aaPredicted RBP25.56■■□□□ 1.68
NPM1-201ENST00000296930 WASHC2CQ9Y4E1 1318 aa25.55■■□□□ 1.68
NPM1-201ENST00000296930 PTPN23Q9H3S7 1636 aa25.53■■□□□ 1.68
NPM1-201ENST00000296930 EIF2AK4Q9P2K8 1649 aaKnown RBP25.52■■□□□ 1.68
NPM1-201ENST00000296930 PZPP20742 1482 aa25.52■■□□□ 1.68
NPM1-201ENST00000296930 RNF17Q9BXT8 1623 aaKnown RBP25.51■■□□□ 1.67
NPM1-201ENST00000296930 PLA2R1Q13018 1463 aa25.5■■□□□ 1.67
NPM1-201ENST00000296930 CROCC2H7BZ55 1655 aa25.49■■□□□ 1.67
NPM1-201ENST00000296930 A2ML1A8K2U0 1454 aa25.48■■□□□ 1.67
NPM1-201ENST00000296930 SHANK2Q9UPX8 1470 aa25.48■■□□□ 1.67
NPM1-201ENST00000296930 TNRQ92752 1358 aa25.47■■□□□ 1.67
NPM1-201ENST00000296930 FGD6Q6ZV73 1430 aa25.47■■□□□ 1.67
NPM1-201ENST00000296930 DUOX2Q9NRD8 1548 aa25.47■■□□□ 1.67
NPM1-201ENST00000296930 PKD2Q13563 968 aa25.46■■□□□ 1.67
NPM1-201ENST00000296930 FBXO31Q5XUX0 539 aaPredicted RBP25.46■■□□□ 1.67
NPM1-201ENST00000296930 ZC3H13Q5T200 1668 aaKnown RBP25.46■■□□□ 1.67
NPM1-201ENST00000296930 ABCC5O15440 1437 aa25.46■■□□□ 1.67
NPM1-201ENST00000296930 NCKAP5LQ9HCH0 1330 aa25.45■■□□□ 1.66
NPM1-201ENST00000296930 DNMT1P26358 1616 aaKnown RBP25.45■■□□□ 1.66
NPM1-201ENST00000296930 TCOF1Q13428 1488 aaKnown RBP25.45■■□□□ 1.66
NPM1-201ENST00000296930 ABCC3O15438 1527 aa25.43■■□□□ 1.66
NPM1-201ENST00000296930 DAPK1P53355 1430 aa25.42■■□□□ 1.66
NPM1-201ENST00000296930 KIF15Q9NS87 1388 aa25.42■■□□□ 1.66
NPM1-201ENST00000296930 MROH1Q8NDA8 1641 aa25.41■■□□□ 1.66
NPM1-201ENST00000296930 LTBP4Q8N2S1 1624 aa25.4■■□□□ 1.66
NPM1-201ENST00000296930 ERBINQ96RT1 1412 aa25.38■■□□□ 1.65
NPM1-201ENST00000296930 NLRP1Q9C000 1473 aa25.38■■□□□ 1.65
NPM1-201ENST00000296930 RRP7BPQ9NSQ0 103 aa25.37■■□□□ 1.65
NPM1-201ENST00000296930 CEP152O94986 1710 aa25.36■■□□□ 1.65
NPM1-201ENST00000296930 SPATA31D1Q6ZQQ2 1576 aa25.34■■□□□ 1.65
NPM1-201ENST00000296930 POLR1AO95602 1720 aaPredicted RBP25.34■■□□□ 1.65
NPM1-201ENST00000296930 PRDM15P57071 1507 aaPredicted RBP25.33■■□□□ 1.65
NPM1-201ENST00000296930 ANKRD30AQ9BXX3 1397 aa25.33■■□□□ 1.65
NPM1-201ENST00000296930 IQSEC2Q5JU85 1478 aa25.33■■□□□ 1.64
NPM1-201ENST00000296930 THEMISQ8N1K5 641 aaPredicted RBP25.32■■□□□ 1.64
NPM1-201ENST00000296930 UGGT1Q9NYU2 1555 aa25.32■■□□□ 1.64
NPM1-201ENST00000296930 CFAP65Q6ZU64 1925 aaKnown RBP25.31■■□□□ 1.64
NPM1-201ENST00000296930 ERVK-7P63135 1459 aa25.31■■□□□ 1.64
NPM1-201ENST00000296930 CHIC2Q9UKJ5 165 aa25.3■■□□□ 1.64
NPM1-201ENST00000296930 DEPDC5O75140 1603 aa25.29■■□□□ 1.64
NPM1-201ENST00000296930 ZNF335Q9H4Z2 1342 aaPredicted RBP25.29■■□□□ 1.64
NPM1-201ENST00000296930 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.28■■□□□ 1.646e-10■■■□□ 18.9
NPM1-201ENST00000296930 NEURL4Q96JN8 1562 aa25.27■■□□□ 1.64
NPM1-201ENST00000296930 ANKLE2Q86XL3 938 aa25.27■■□□□ 1.64
NPM1-201ENST00000296930 FAM50AQ14320 339 aaKnown RBP25.26■■□□□ 1.63
NPM1-201ENST00000296930 ARHGAP31Q2M1Z3 1444 aa25.26■■□□□ 1.63
NPM1-201ENST00000296930 KANK1Q14678 1352 aa25.25■■□□□ 1.63
NPM1-201ENST00000296930 ADGRL2O95490 1459 aa25.25■■□□□ 1.63
NPM1-201ENST00000296930 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.24■■□□□ 1.634e-10■■□□□ 12.1
NPM1-201ENST00000296930 MED14O60244 1454 aa25.2■■□□□ 1.62
NPM1-201ENST00000296930 VWDEQ8N2E2 1590 aa25.18■■□□□ 1.62
NPM1-201ENST00000296930 UBR1Q8IWV7 1749 aa25.18■■□□□ 1.62
NPM1-201ENST00000296930 LMTK2Q8IWU2 1503 aa25.18■■□□□ 1.62
NPM1-201ENST00000296930 NPHP4O75161 1426 aaPredicted RBP25.17■■□□□ 1.62
NPM1-201ENST00000296930 IQGAP1P46940 1657 aa25.15■■□□□ 1.62
NPM1-201ENST00000296930 ANKRD50Q9ULJ7 1429 aa25.14■■□□□ 1.61
NPM1-201ENST00000296930 CPS1P31327 1500 aa25.13■■□□□ 1.61
NPM1-201ENST00000296930 EFCAB6Q5THR3 1501 aa25.1■■□□□ 1.61
NPM1-201ENST00000296930 UBAP1LF5GYI3 381 aa25.09■■□□□ 1.61
NPM1-201ENST00000296930 PIK3C2BO00750 1634 aa25.09■■□□□ 1.61
NPM1-201ENST00000296930 SLIT1O75093 1534 aa25.09■■□□□ 1.61
NPM1-201ENST00000296930 SCAF11Q99590 1463 aaKnown RBP25.08■■□□□ 1.61
NPM1-201ENST00000296930 ARHGAP23Q9P227 1491 aa25.08■■□□□ 1.61
NPM1-201ENST00000296930 KDM5AP29375 1690 aaKnown RBP25.06■■□□□ 1.6
NPM1-201ENST00000296930 ROCK1Q13464 1354 aa25.05■■□□□ 1.6
NPM1-201ENST00000296930 STAG3Q9UJ98 1225 aa25.04■■□□□ 1.6
NPM1-201ENST00000296930 NOS1P29475 1434 aa25.04■■□□□ 1.6
NPM1-201ENST00000296930 SYNMO15061 1565 aa25.04■■□□□ 1.6
NPM1-201ENST00000296930 TXNDC2Q86VQ3 553 aa25.03■■□□□ 1.6
NPM1-201ENST00000296930 RPRD2Q5VT52 1461 aaKnown RBP25.03■■□□□ 1.6
NPM1-201ENST00000296930 EID1Q9Y6B2 187 aa25.03■■□□□ 1.6
NPM1-201ENST00000296930 LTKP29376 864 aa25.02■■□□□ 1.6
NPM1-201ENST00000296930 IDI1Q13907 227 aa25.02■■□□□ 1.6
NPM1-201ENST00000296930 TET3O43151 1660 aa25.01■■□□□ 1.6
NPM1-201ENST00000296930 PPARGC1BQ86YN6 1023 aaKnown RBP25.01■■□□□ 1.59
NPM1-201ENST00000296930 UNC13BO14795 1591 aa25.01■■□□□ 1.59
NPM1-201ENST00000296930 TMEM2Q9UHN6 1383 aa25■■□□□ 1.59
NPM1-201ENST00000296930 STRCP1A6NGW2 1772 aa24.98■■□□□ 1.59
NPM1-201ENST00000296930 SLC52A1Q9NWF4 448 aa24.98■■□□□ 1.59
NPM1-201ENST00000296930 GCC2Q8IWJ2 1684 aa24.98■■□□□ 1.59
NPM1-201ENST00000296930 TOM1O60784 492 aa24.97■■□□□ 1.59
NPM1-201ENST00000296930 ITGAEP38570 1179 aa24.95■■□□□ 1.59
NPM1-201ENST00000296930 ADGRB3O60242 1522 aa24.95■■□□□ 1.59
NPM1-201ENST00000296930 LRRC7Q96NW7 1537 aa24.92■■□□□ 1.58
NPM1-201ENST00000296930 IQGAP3Q86VI3 1631 aa24.92■■□□□ 1.58
NPM1-201ENST00000296930 SCAF1Q9H7N4 1312 aaKnown RBP24.9■■□□□ 1.58
NPM1-201ENST00000296930 E9PCH4 1651 aa24.89■■□□□ 1.58
NPM1-201ENST00000296930 DISP3Q9P2K9 1392 aa24.89■■□□□ 1.58
NPM1-201ENST00000296930 PIP4K2BP78356 416 aa24.88■■□□□ 1.57
NPM1-201ENST00000296930 MYO5BQ9ULV0 1848 aa24.87■■□□□ 1.57
NPM1-201ENST00000296930 NUP155O75694 1391 aa24.86■■□□□ 1.57
NPM1-201ENST00000296930 RRBP1Q9P2E9 1410 aaKnown RBP24.86■■□□□ 1.57
NPM1-201ENST00000296930 TMEM131LA2VDJ0 1609 aa24.84■■□□□ 1.57
NPM1-201ENST00000296930 ALKQ9UM73 1620 aa24.84■■□□□ 1.57
NPM1-201ENST00000296930 HDGFP51858 240 aaKnown RBP24.81■■□□□ 1.56
NPM1-201ENST00000296930 ZFYVE9O95405 1425 aa24.81■■□□□ 1.56
NPM1-201ENST00000296930 HSPA1LP34931 641 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms