RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 KDM2AQ9Y2K7 1162 aa12.8□□□□□ -0.36
UBLCP1-201ENST00000296786 DCAF11Q8TEB1 546 aa12.8□□□□□ -0.36
UBLCP1-201ENST00000296786 POLR3GLQ9BT43 218 aa12.8□□□□□ -0.36
UBLCP1-201ENST00000296786 TSHZ2Q9NRE2 1034 aa12.8□□□□□ -0.36
UBLCP1-201ENST00000296786 DUOX2Q9NRD8 1548 aa12.8□□□□□ -0.36
UBLCP1-201ENST00000296786 CCDC144AA2RUR9 1427 aa12.8□□□□□ -0.36
UBLCP1-201ENST00000296786 ARID4BQ4LE39 1312 aaPredicted RBP12.8□□□□□ -0.36
UBLCP1-201ENST00000296786 UHRF1BP1LA0JNW5 1464 aa12.79□□□□□ -0.36
UBLCP1-201ENST00000296786 E9PCH4 1651 aa12.79□□□□□ -0.36
UBLCP1-201ENST00000296786 ABCC1P33527 1531 aa12.78□□□□□ -0.36
UBLCP1-201ENST00000296786 PLCH2O75038 1416 aa12.78□□□□□ -0.36
UBLCP1-201ENST00000296786 PLA2R1Q13018 1463 aa12.77□□□□□ -0.37
UBLCP1-201ENST00000296786 MAGI2Q86UL8 1455 aa12.77□□□□□ -0.37
UBLCP1-201ENST00000296786 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.77□□□□□ -0.37
UBLCP1-201ENST00000296786 ROCK2O75116 1388 aaKnown RBP12.76□□□□□ -0.37
UBLCP1-201ENST00000296786 PRAG1Q86YV5 1406 aa12.76□□□□□ -0.37
UBLCP1-201ENST00000296786 ERBINQ96RT1 1412 aa12.76□□□□□ -0.37
UBLCP1-201ENST00000296786 ST20-MTHFSA0A0A6YYL1 179 aa12.75□□□□□ -0.37
UBLCP1-201ENST00000296786 ZBED9Q6R2W3 1325 aa12.75□□□□□ -0.37
UBLCP1-201ENST00000296786 CNGB1Q14028 1251 aaPredicted RBP12.74□□□□□ -0.37
UBLCP1-201ENST00000296786 A2MP01023 1474 aa12.74□□□□□ -0.37
UBLCP1-201ENST00000296786 LAMC1P11047 1609 aa12.74□□□□□ -0.37
UBLCP1-201ENST00000296786 EFCAB2Q5VUJ9 269 aa12.73□□□□□ -0.37
UBLCP1-201ENST00000296786 TRAPPC8Q9Y2L5 1435 aa12.72□□□□□ -0.37
UBLCP1-201ENST00000296786 RGL3Q3MIN7 710 aa12.72□□□□□ -0.37
UBLCP1-201ENST00000296786 EIF2AK4Q9P2K8 1649 aaKnown RBP12.72□□□□□ -0.37
UBLCP1-201ENST00000296786 ARAP3Q8WWN8 1544 aa12.72□□□□□ -0.37
UBLCP1-201ENST00000296786 ATP10AO60312 1499 aa12.72□□□□□ -0.37
UBLCP1-201ENST00000296786 IRX6P78412 446 aaPredicted RBP12.71□□□□□ -0.37
UBLCP1-201ENST00000296786 PRDM15P57071 1507 aaPredicted RBP12.7□□□□□ -0.38
UBLCP1-201ENST00000296786 ZFYVE16Q7Z3T8 1539 aa12.7□□□□□ -0.38
UBLCP1-201ENST00000296786 CEP152O94986 1710 aa12.69□□□□□ -0.38
UBLCP1-201ENST00000296786 SPHKAPQ2M3C7 1700 aa12.69□□□□□ -0.38
UBLCP1-201ENST00000296786 ABCA9Q8IUA7 1624 aa12.69□□□□□ -0.38
UBLCP1-201ENST00000296786 DEPDC5O75140 1603 aa12.69□□□□□ -0.38
UBLCP1-201ENST00000296786 RNF17Q9BXT8 1623 aaKnown RBP12.69□□□□□ -0.38
UBLCP1-201ENST00000296786 GPRASP1Q5JY77 1395 aa12.68□□□□□ -0.38
UBLCP1-201ENST00000296786 NBPF1Q3BBV0 1214 aa12.68□□□□□ -0.38
UBLCP1-201ENST00000296786 WDR7Q9Y4E6 1490 aa12.67□□□□□ -0.38
UBLCP1-201ENST00000296786 INO80Q9ULG1 1556 aaPredicted RBP12.66□□□□□ -0.38
UBLCP1-201ENST00000296786 RTEL1-TNFRSF6BF6WH68 1400 aa12.66□□□□□ -0.38
UBLCP1-201ENST00000296786 SPAG9O60271 1321 aaKnown RBP12.66□□□□□ -0.38
UBLCP1-201ENST00000296786 AFAP1Q8N556 730 aa12.65□□□□□ -0.38
UBLCP1-201ENST00000296786 TET3O43151 1660 aa12.65□□□□□ -0.38
UBLCP1-201ENST00000296786 COL17A1Q9UMD9 1497 aaPredicted RBP12.65□□□□□ -0.38
UBLCP1-201ENST00000296786 ATP7AQ04656 1500 aa12.65□□□□□ -0.38
UBLCP1-201ENST00000296786 MADDQ8WXG6 1647 aa12.64□□□□□ -0.39
UBLCP1-201ENST00000296786 KTN1Q86UP2 1357 aaKnown RBP12.64□□□□□ -0.39
UBLCP1-201ENST00000296786 FANCAO15360 1455 aa12.64□□□□□ -0.39
UBLCP1-201ENST00000296786 TRPM2O94759 1503 aa12.64□□□□□ -0.39
UBLCP1-201ENST00000296786 ERICH6BQ5W0A0 696 aa12.64□□□□□ -0.39
UBLCP1-201ENST00000296786 TMC1Q8TDI8 760 aa12.64□□□□□ -0.39
UBLCP1-201ENST00000296786 PNISRQ8TF01 805 aaKnown RBP12.64□□□□□ -0.39
UBLCP1-201ENST00000296786 CLTCL1P53675 1640 aa12.63□□□□□ -0.39
UBLCP1-201ENST00000296786 IQGAP1P46940 1657 aa12.63□□□□□ -0.39
UBLCP1-201ENST00000296786 MYBBP1AQ9BQG0 1328 aaKnown RBP12.63□□□□□ -0.39
UBLCP1-201ENST00000296786 RALBP1Q15311 655 aa12.62□□□□□ -0.39
UBLCP1-201ENST00000296786 BRD4O60885 1362 aaPredicted RBP12.62□□□□□ -0.39
UBLCP1-201ENST00000296786 SMG6Q86US8 1419 aaKnown RBP12.62□□□□□ -0.39
UBLCP1-201ENST00000296786 DISP3Q9P2K9 1392 aa12.61□□□□□ -0.39
UBLCP1-201ENST00000296786 TESK2Q96S53 571 aa12.61□□□□□ -0.39
UBLCP1-201ENST00000296786 LRPPRCP42704 1394 aaKnown RBP12.6□□□□□ -0.39
UBLCP1-201ENST00000296786 VWDEQ8N2E2 1590 aa12.6□□□□□ -0.39
UBLCP1-201ENST00000296786 ADGRL1O94910 1474 aa12.6□□□□□ -0.39
UBLCP1-201ENST00000296786 PARD3Q8TEW0 1356 aa12.59□□□□□ -0.39
UBLCP1-201ENST00000296786 PPP4R2Q9NY27 417 aa12.59□□□□□ -0.39
UBLCP1-201ENST00000296786 KIF1BO60333 1816 aa12.59□□□□□ -0.39
UBLCP1-201ENST00000296786 MROH1Q8NDA8 1641 aa12.59□□□□□ -0.39
UBLCP1-201ENST00000296786 PTPRTO14522 1441 aa12.58□□□□□ -0.39
UBLCP1-201ENST00000296786 NUDCQ9Y266 331 aa12.58□□□□□ -0.4
UBLCP1-201ENST00000296786 RBM19Q9Y4C8 960 aaKnown RBP12.58□□□□□ -0.4
UBLCP1-201ENST00000296786 KIDINS220Q9ULH0 1771 aa12.58□□□□□ -0.4
UBLCP1-201ENST00000296786 SENP3-EIF4A1A0A087X0R7 540 aa12.58□□□□□ -0.4
UBLCP1-201ENST00000296786 PER1O15534 1290 aaPredicted RBP12.58□□□□□ -0.4
UBLCP1-201ENST00000296786 ASXL2Q76L83 1435 aa12.58□□□□□ -0.4
UBLCP1-201ENST00000296786 SCAPERQ9BY12 1400 aa12.57□□□□□ -0.4
UBLCP1-201ENST00000296786 KIAA1210Q9ULL0 1709 aa12.56□□□□□ -0.4
UBLCP1-201ENST00000296786 KANK1Q14678 1352 aa12.56□□□□□ -0.4
UBLCP1-201ENST00000296786 TMF1P82094 1093 aa12.56□□□□□ -0.4
UBLCP1-201ENST00000296786 NLRP13Q86W25 1043 aa12.56□□□□□ -0.4
UBLCP1-201ENST00000296786 CFAP65Q6ZU64 1925 aaKnown RBP12.55□□□□□ -0.4
UBLCP1-201ENST00000296786 IFT172Q9UG01 1749 aa12.55□□□□□ -0.4
UBLCP1-201ENST00000296786 MYT1LQ9UL68 1186 aa12.55□□□□□ -0.4
UBLCP1-201ENST00000296786 KIF3BO15066 747 aa12.54□□□□□ -0.4
UBLCP1-201ENST00000296786 PANK3Q9H999 370 aa12.54□□□□□ -0.4
UBLCP1-201ENST00000296786 NEURL4Q96JN8 1562 aa12.53□□□□□ -0.4
UBLCP1-201ENST00000296786 WASHC2CQ9Y4E1 1318 aa12.53□□□□□ -0.4
UBLCP1-201ENST00000296786 B4GALNT3Q6L9W6 998 aa12.53□□□□□ -0.4
UBLCP1-201ENST00000296786 UGGT1Q9NYU2 1555 aa12.53□□□□□ -0.4
UBLCP1-201ENST00000296786 MROH2AA6NES4 1674 aa12.53□□□□□ -0.4
UBLCP1-201ENST00000296786 MYOM1P52179 1685 aa12.53□□□□□ -0.4
UBLCP1-201ENST00000296786 PPRC1Q5VV67 1664 aaKnown RBP12.53□□□□□ -0.4
UBLCP1-201ENST00000296786 EFCAB6Q5THR3 1501 aa12.53□□□□□ -0.4
UBLCP1-201ENST00000296786 MYT1Q01538 1121 aa12.52□□□□□ -0.4
UBLCP1-201ENST00000296786 CC2D1BQ5T0F9 858 aaKnown RBP12.52□□□□□ -0.4
UBLCP1-201ENST00000296786 RNF123Q5XPI4 1314 aa12.52□□□□□ -0.4
UBLCP1-201ENST00000296786 MAP3K4Q9Y6R4 1608 aa12.52□□□□□ -0.41
UBLCP1-201ENST00000296786 SCAF11Q99590 1463 aaKnown RBP12.52□□□□□ -0.41
UBLCP1-201ENST00000296786 SYNMO15061 1565 aa12.51□□□□□ -0.41
UBLCP1-201ENST00000296786 CFAP74Q9C0B2 1584 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms