RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 FAM135AQ9P2D6 1515 aa20.97■□□□□ 0.95
LRRTM1-201ENST00000295057 CYB5RLQ6IPT4 315 aa20.97■□□□□ 0.95
LRRTM1-201ENST00000295057 KDM5DQ9BY66 1539 aa20.96■□□□□ 0.95
LRRTM1-201ENST00000295057 DEKP35659 375 aaKnown RBP20.95■□□□□ 0.95
LRRTM1-201ENST00000295057 ABCA9Q8IUA7 1624 aa20.95■□□□□ 0.94
LRRTM1-201ENST00000295057 SCAPERQ9BY12 1400 aa20.94■□□□□ 0.94
LRRTM1-201ENST00000295057 PLXNC1O60486 1568 aa20.93■□□□□ 0.94
LRRTM1-201ENST00000295057 KDM2AQ9Y2K7 1162 aa20.93■□□□□ 0.94
LRRTM1-201ENST00000295057 EIF4G2P78344 907 aaKnown RBP eCLIP20.92■□□□□ 0.94
LRRTM1-201ENST00000295057 PPP4R2Q9NY27 417 aa20.92■□□□□ 0.94
LRRTM1-201ENST00000295057 ADGRL1O94910 1474 aa20.92■□□□□ 0.94
LRRTM1-201ENST00000295057 DUOX2Q9NRD8 1548 aa20.91■□□□□ 0.94
LRRTM1-201ENST00000295057 ARAP3Q8WWN8 1544 aa20.91■□□□□ 0.94
LRRTM1-201ENST00000295057 C11orf95C9JLR9 678 aaPredicted RBP20.91■□□□□ 0.94
LRRTM1-201ENST00000295057 B4GALNT3Q6L9W6 998 aa20.91■□□□□ 0.94
LRRTM1-201ENST00000295057 CCDC184Q52MB2 194 aa20.9■□□□□ 0.94
LRRTM1-201ENST00000295057 WASHC2AQ641Q2 1341 aa20.89■□□□□ 0.93
LRRTM1-201ENST00000295057 ZFYVE16Q7Z3T8 1539 aa20.88■□□□□ 0.93
LRRTM1-201ENST00000295057 RGL3Q3MIN7 710 aa20.88■□□□□ 0.93
LRRTM1-201ENST00000295057 UNC13BO14795 1591 aa20.87■□□□□ 0.93
LRRTM1-201ENST00000295057 DCAF11Q8TEB1 546 aa20.87■□□□□ 0.93
LRRTM1-201ENST00000295057 PLA2R1Q13018 1463 aa20.87■□□□□ 0.93
LRRTM1-201ENST00000295057 CD109Q6YHK3 1445 aa20.87■□□□□ 0.93
LRRTM1-201ENST00000295057 ERBINQ96RT1 1412 aa20.87■□□□□ 0.93
LRRTM1-201ENST00000295057 ERICH6BQ5W0A0 696 aa20.84■□□□□ 0.93
LRRTM1-201ENST00000295057 RTEL1-TNFRSF6BF6WH68 1400 aa20.83■□□□□ 0.93
LRRTM1-201ENST00000295057 NBR1Q14596 966 aa20.83■□□□□ 0.93
LRRTM1-201ENST00000295057 KIF3BO15066 747 aa20.83■□□□□ 0.92
LRRTM1-201ENST00000295057 ATP7AQ04656 1500 aa20.81■□□□□ 0.92
LRRTM1-201ENST00000295057 CCDC144AA2RUR9 1427 aa20.81■□□□□ 0.92
LRRTM1-201ENST00000295057 PAK3O75914 559 aaPredicted RBP20.81■□□□□ 0.92
LRRTM1-201ENST00000295057 ANO8Q9HCE9 1232 aaPredicted RBP20.81■□□□□ 0.92
LRRTM1-201ENST00000295057 IQGAP3Q86VI3 1631 aa20.8■□□□□ 0.92
LRRTM1-201ENST00000295057 FAM9BQ8IZU0 186 aa20.79■□□□□ 0.92
LRRTM1-201ENST00000295057 MAGI2Q86UL8 1455 aa20.79■□□□□ 0.92
LRRTM1-201ENST00000295057 RAPGEF3O95398 923 aa20.78■□□□□ 0.92
LRRTM1-201ENST00000295057 NOP58Q9Y2X3 529 aaKnown RBP20.78■□□□□ 0.92
LRRTM1-201ENST00000295057 SPATA31E1Q6ZUB1 1445 aa20.78■□□□□ 0.92
LRRTM1-201ENST00000295057 INO80Q9ULG1 1556 aaPredicted RBP20.78■□□□□ 0.92
LRRTM1-201ENST00000295057 GLI2P10070 1586 aa20.76■□□□□ 0.91
LRRTM1-201ENST00000295057 USP47Q96K76 1375 aa20.74■□□□□ 0.91
LRRTM1-201ENST00000295057 DHX29Q7Z478 1369 aaKnown RBP20.73■□□□□ 0.91
LRRTM1-201ENST00000295057 CARD11Q9BXL7 1154 aa20.73■□□□□ 0.91
LRRTM1-201ENST00000295057 CCDC7Q96M83 1385 aa20.73■□□□□ 0.91
LRRTM1-201ENST00000295057 POLR3GLQ9BT43 218 aa20.73■□□□□ 0.91
LRRTM1-201ENST00000295057 KIF7Q2M1P5 1343 aa20.72■□□□□ 0.91
LRRTM1-201ENST00000295057 UHRF1BP1Q6BDS2 1440 aa20.72■□□□□ 0.91
LRRTM1-201ENST00000295057 ZNF518AQ6AHZ1 1483 aa20.71■□□□□ 0.91
LRRTM1-201ENST00000295057 KIDINS220Q9ULH0 1771 aa20.71■□□□□ 0.91
LRRTM1-201ENST00000295057 POGZQ7Z3K3 1410 aa20.7■□□□□ 0.9
LRRTM1-201ENST00000295057 NBPF1Q3BBV0 1214 aa20.7■□□□□ 0.9
LRRTM1-201ENST00000295057 MRS2Q9HD23 443 aa20.7■□□□□ 0.9
LRRTM1-201ENST00000295057 CNTLNQ9NXG0 1405 aa20.69■□□□□ 0.9
LRRTM1-201ENST00000295057 DNAJC5Q9H3Z4 198 aa20.69■□□□□ 0.9
LRRTM1-201ENST00000295057 PRKRIP1Q9H875 184 aaPredicted RBP20.69■□□□□ 0.9
LRRTM1-201ENST00000295057 A2MP01023 1474 aa20.69■□□□□ 0.9
LRRTM1-201ENST00000295057 ZBED9Q6R2W3 1325 aa20.68■□□□□ 0.9
LRRTM1-201ENST00000295057 CFAP74Q9C0B2 1584 aa20.67■□□□□ 0.9
LRRTM1-201ENST00000295057 E9PCH4 1651 aa20.67■□□□□ 0.9
LRRTM1-201ENST00000295057 DIP2BQ9P265 1576 aa20.67■□□□□ 0.9
LRRTM1-201ENST00000295057 RALGAPBQ86X10 1494 aa20.67■□□□□ 0.9
LRRTM1-201ENST00000295057 FAM69CQ0P6D2 419 aa20.67■□□□□ 0.9
LRRTM1-201ENST00000295057 MAP3K4Q9Y6R4 1608 aa20.66■□□□□ 0.9
LRRTM1-201ENST00000295057 GGT6Q6P531 493 aa20.66■□□□□ 0.9
LRRTM1-201ENST00000295057 ST20-MTHFSA0A0A6YYL1 179 aa20.65■□□□□ 0.9
LRRTM1-201ENST00000295057 CNGB1Q14028 1251 aaPredicted RBP20.65■□□□□ 0.9
LRRTM1-201ENST00000295057 ROCK2O75116 1388 aaKnown RBP20.65■□□□□ 0.9
LRRTM1-201ENST00000295057 ATP10AO60312 1499 aa20.65■□□□□ 0.9
LRRTM1-201ENST00000295057 KANK1Q14678 1352 aa20.65■□□□□ 0.9
LRRTM1-201ENST00000295057 PRAG1Q86YV5 1406 aa20.65■□□□□ 0.9
LRRTM1-201ENST00000295057 DEPDC5O75140 1603 aa20.64■□□□□ 0.89
LRRTM1-201ENST00000295057 BCORL1Q5H9F3 1711 aa20.63■□□□□ 0.89
LRRTM1-201ENST00000295057 KDM5CP41229 1560 aa20.63■□□□□ 0.89
LRRTM1-201ENST00000295057 MROH1Q8NDA8 1641 aa20.63■□□□□ 0.89
LRRTM1-201ENST00000295057 NEO1Q92859 1461 aa20.62■□□□□ 0.89
LRRTM1-201ENST00000295057 SALL2Q9Y467 1007 aaPredicted RBP20.61■□□□□ 0.89
LRRTM1-201ENST00000295057 FRMPD1Q5SYB0 1578 aa20.59■□□□□ 0.89
LRRTM1-201ENST00000295057 MLH3Q9UHC1 1453 aa20.59■□□□□ 0.89
LRRTM1-201ENST00000295057 VWDEQ8N2E2 1590 aa20.59■□□□□ 0.89
LRRTM1-201ENST00000295057 UGGT1Q9NYU2 1555 aa20.59■□□□□ 0.89
LRRTM1-201ENST00000295057 PTPRTO14522 1441 aa20.58■□□□□ 0.88
LRRTM1-201ENST00000295057 PRDM15P57071 1507 aaPredicted RBP20.57■□□□□ 0.88
LRRTM1-201ENST00000295057 HECW2Q9P2P5 1572 aa20.57■□□□□ 0.88
LRRTM1-201ENST00000295057 TET3O43151 1660 aa20.56■□□□□ 0.88
LRRTM1-201ENST00000295057 IPO9Q96P70 1041 aaKnown RBP20.56■□□□□ 0.88
LRRTM1-201ENST00000295057 ABCA6Q8N139 1617 aa20.56■□□□□ 0.88
LRRTM1-201ENST00000295057 TRPM2O94759 1503 aa20.56■□□□□ 0.88
LRRTM1-201ENST00000295057 CLTCL1P53675 1640 aa20.56■□□□□ 0.88
LRRTM1-201ENST00000295057 EIF2AK4Q9P2K8 1649 aaKnown RBP20.55■□□□□ 0.88
LRRTM1-201ENST00000295057 SENP3-EIF4A1A0A087X0R7 540 aa20.55■□□□□ 0.88
LRRTM1-201ENST00000295057 YEATS2Q9ULM3 1422 aa20.55■□□□□ 0.88
LRRTM1-201ENST00000295057 ANP32AP39687 249 aaKnown RBP20.54■□□□□ 0.88
LRRTM1-201ENST00000295057 TRPM1Q7Z4N2 1603 aa20.54■□□□□ 0.88
LRRTM1-201ENST00000295057 CCDC136Q96JN2 1154 aa20.53■□□□□ 0.88
LRRTM1-201ENST00000295057 SPHKAPQ2M3C7 1700 aa20.53■□□□□ 0.88
LRRTM1-201ENST00000295057 WASHC2CQ9Y4E1 1318 aa20.52■□□□□ 0.87
LRRTM1-201ENST00000295057 PPRC1Q5VV67 1664 aaKnown RBP20.51■□□□□ 0.87
LRRTM1-201ENST00000295057 RTL5Q5HYW3 569 aaPredicted RBP20.51■□□□□ 0.87
LRRTM1-201ENST00000295057 ZBTB47Q9UFB7 747 aaPredicted RBP20.51■□□□□ 0.87
LRRTM1-201ENST00000295057 CEP152O94986 1710 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms