RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 ADGBQ8N7X0 1667 aa25.9■■□□□ 1.74
UBXN1-201ENST00000294119 NPHP4O75161 1426 aaPredicted RBP25.9■■□□□ 1.74
UBXN1-201ENST00000294119 HNRNPMP52272 730 aaKnown RBP eCLIP25.9■■□□□ 1.74
UBXN1-201ENST00000294119 ANKLE2Q86XL3 938 aa25.89■■□□□ 1.74
UBXN1-201ENST00000294119 PZPP20742 1482 aa25.88■■□□□ 1.73
UBXN1-201ENST00000294119 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.88■■□□□ 1.73
UBXN1-201ENST00000294119 IQGAP1P46940 1657 aa25.87■■□□□ 1.73
UBXN1-201ENST00000294119 POTEAQ6S8J7 498 aa25.86■■□□□ 1.73
UBXN1-201ENST00000294119 CASKIN1Q8WXD9 1431 aa25.86■■□□□ 1.73
UBXN1-201ENST00000294119 PLEKHH2Q8IVE3 1493 aa25.85■■□□□ 1.73
UBXN1-201ENST00000294119 FBXO31Q5XUX0 539 aaPredicted RBP25.85■■□□□ 1.73
UBXN1-201ENST00000294119 ZNF777Q9ULD5 760 aaPredicted RBP25.85■■□□□ 1.73
UBXN1-201ENST00000294119 FAM135AQ9P2D6 1515 aa25.84■■□□□ 1.73
UBXN1-201ENST00000294119 NLRP1Q9C000 1473 aa25.83■■□□□ 1.73
UBXN1-201ENST00000294119 THEMISQ8N1K5 641 aaPredicted RBP25.82■■□□□ 1.72
UBXN1-201ENST00000294119 UGGT1Q9NYU2 1555 aa25.81■■□□□ 1.72
UBXN1-201ENST00000294119 SENP3Q9H4L4 574 aaPredicted RBP25.79■■□□□ 1.72
UBXN1-201ENST00000294119 MIA2Q96PC5 1412 aa25.79■■□□□ 1.72
UBXN1-201ENST00000294119 KDM5DQ9BY66 1539 aa25.78■■□□□ 1.72
UBXN1-201ENST00000294119 DHX29Q7Z478 1369 aaKnown RBP25.76■■□□□ 1.71
UBXN1-201ENST00000294119 ZC3H13Q5T200 1668 aaKnown RBP25.76■■□□□ 1.71
UBXN1-201ENST00000294119 UBTFP17480 764 aaKnown RBP25.75■■□□□ 1.71
UBXN1-201ENST00000294119 RTEL1-TNFRSF6BF6WH68 1400 aa25.74■■□□□ 1.71
UBXN1-201ENST00000294119 XIRP1Q702N8 1843 aaKnown RBP25.73■■□□□ 1.71
UBXN1-201ENST00000294119 MBD5Q9P267 1494 aa25.72■■□□□ 1.71
UBXN1-201ENST00000294119 SETD1AO15047 1707 aaKnown RBP25.72■■□□□ 1.71
UBXN1-201ENST00000294119 FAM135BQ49AJ0 1406 aa25.71■■□□□ 1.71
UBXN1-201ENST00000294119 SRCAPQ6ZRS2 3230 aa25.71■■□□□ 1.71
UBXN1-201ENST00000294119 CFDP1Q9UEE9 299 aaPredicted RBP25.7■■□□□ 1.7
UBXN1-201ENST00000294119 FYCO1Q9BQS8 1478 aa25.68■■□□□ 1.7
UBXN1-201ENST00000294119 CCNB3Q8WWL7 1395 aa25.62■■□□□ 1.69
UBXN1-201ENST00000294119 KIF3BO15066 747 aa25.62■■□□□ 1.69
UBXN1-201ENST00000294119 WASHC2CQ9Y4E1 1318 aa25.61■■□□□ 1.69
UBXN1-201ENST00000294119 ZNF644Q9H582 1327 aaPredicted RBP25.6■■□□□ 1.69
UBXN1-201ENST00000294119 EHMT2Q96KQ7 1210 aa25.58■■□□□ 1.69
UBXN1-201ENST00000294119 SCAF11Q99590 1463 aaKnown RBP25.56■■□□□ 1.68
UBXN1-201ENST00000294119 UBR1Q8IWV7 1749 aa25.56■■□□□ 1.68
UBXN1-201ENST00000294119 TIAM1Q13009 1591 aa25.56■■□□□ 1.68
UBXN1-201ENST00000294119 ARHGAP23Q9P227 1491 aa25.55■■□□□ 1.68
UBXN1-201ENST00000294119 UPF1Q92900 1129 aaKnown RBP eCLIP25.55■■□□□ 1.68
UBXN1-201ENST00000294119 ROBO1Q9Y6N7 1651 aa25.55■■□□□ 1.68
UBXN1-201ENST00000294119 NCOA2Q15596 1464 aa25.53■■□□□ 1.68
UBXN1-201ENST00000294119 SLIT1O75093 1534 aa25.53■■□□□ 1.68
UBXN1-201ENST00000294119 ERVK-7P63135 1459 aa25.52■■□□□ 1.68
UBXN1-201ENST00000294119 ABCC3O15438 1527 aa25.5■■□□□ 1.67
UBXN1-201ENST00000294119 MAP3K1Q13233 1512 aa25.49■■□□□ 1.67
UBXN1-201ENST00000294119 LTKP29376 864 aa25.49■■□□□ 1.67
UBXN1-201ENST00000294119 CCDC141Q6ZP82 1450 aa25.48■■□□□ 1.67
UBXN1-201ENST00000294119 TMEM94Q12767 1356 aa25.44■■□□□ 1.66
UBXN1-201ENST00000294119 LRRC9Q6ZRR7 1453 aa25.44■■□□□ 1.66
UBXN1-201ENST00000294119 MTUS2Q5JR59 1369 aa25.42■■□□□ 1.66
UBXN1-201ENST00000294119 CHIC1Q5VXU3 224 aa25.41■■□□□ 1.66
UBXN1-201ENST00000294119 JCADQ9P266 1359 aa25.41■■□□□ 1.66
UBXN1-201ENST00000294119 CAMSAP2Q08AD1 1489 aa25.4■■□□□ 1.66
UBXN1-201ENST00000294119 MROH1Q8NDA8 1641 aa25.4■■□□□ 1.66
UBXN1-201ENST00000294119 TXNDC2Q86VQ3 553 aa25.39■■□□□ 1.66
UBXN1-201ENST00000294119 CEP162Q5TB80 1403 aa25.37■■□□□ 1.65
UBXN1-201ENST00000294119 PHLPP1O60346 1717 aa25.37■■□□□ 1.65
UBXN1-201ENST00000294119 RSPH4AQ5TD94 716 aa25.37■■□□□ 1.65
UBXN1-201ENST00000294119 LRP6O75581 1613 aa25.37■■□□□ 1.65
UBXN1-201ENST00000294119 EHBP1L1Q8N3D4 1523 aa25.36■■□□□ 1.65
UBXN1-201ENST00000294119 COL16A1Q07092 1604 aaPredicted RBP25.35■■□□□ 1.65
UBXN1-201ENST00000294119 ARHGEF5Q12774 1597 aa25.35■■□□□ 1.65
UBXN1-201ENST00000294119 PRDM15P57071 1507 aaPredicted RBP25.34■■□□□ 1.65
UBXN1-201ENST00000294119 EIF2AK4Q9P2K8 1649 aaKnown RBP25.34■■□□□ 1.65
UBXN1-201ENST00000294119 KCNA6P17658 529 aa25.33■■□□□ 1.65
UBXN1-201ENST00000294119 TET3O43151 1660 aa25.32■■□□□ 1.64
UBXN1-201ENST00000294119 NWD1Q149M9 1564 aa25.32■■□□□ 1.64
UBXN1-201ENST00000294119 CDK12Q9NYV4 1490 aaPredicted RBP25.31■■□□□ 1.64
UBXN1-201ENST00000294119 TMEM2Q9UHN6 1383 aa25.31■■□□□ 1.64
UBXN1-201ENST00000294119 NKTRP30414 1462 aaKnown RBP25.3■■□□□ 1.64
UBXN1-201ENST00000294119 CEP152O94986 1710 aa25.3■■□□□ 1.64
UBXN1-201ENST00000294119 CFAP65Q6ZU64 1925 aaKnown RBP25.29■■□□□ 1.64
UBXN1-201ENST00000294119 ZNF772Q68DY9 489 aaPredicted RBP25.29■■□□□ 1.64
UBXN1-201ENST00000294119 ARHGAP31Q2M1Z3 1444 aa25.29■■□□□ 1.64
UBXN1-201ENST00000294119 FGD6Q6ZV73 1430 aa25.29■■□□□ 1.64
UBXN1-201ENST00000294119 EID1Q9Y6B2 187 aa25.28■■□□□ 1.64
UBXN1-201ENST00000294119 SPATA31A6Q5VVP1 1343 aa25.27■■□□□ 1.64
UBXN1-201ENST00000294119 MAST1Q9Y2H9 1570 aa25.27■■□□□ 1.64
UBXN1-201ENST00000294119 PIK3C2BO00750 1634 aa25.26■■□□□ 1.63
UBXN1-201ENST00000294119 KDM5AP29375 1690 aaKnown RBP25.26■■□□□ 1.63
UBXN1-201ENST00000294119 TRIM52Q96A61 297 aa25.26■■□□□ 1.63
UBXN1-201ENST00000294119 SLAIN2Q9P270 581 aa25.26■■□□□ 1.63
UBXN1-201ENST00000294119 PROSER2Q86WR7 435 aaPredicted RBP25.25■■□□□ 1.63
UBXN1-201ENST00000294119 RBM33Q96EV2 1170 aaKnown RBP25.24■■□□□ 1.63
UBXN1-201ENST00000294119 MSH6P52701 1360 aa25.22■■□□□ 1.63
UBXN1-201ENST00000294119 SHPRHQ149N8 1683 aa25.22■■□□□ 1.63
UBXN1-201ENST00000294119 TSPY4P0CV99 314 aa25.19■■□□□ 1.62
UBXN1-201ENST00000294119 TSPY10P0CW01 314 aa25.19■■□□□ 1.62
UBXN1-201ENST00000294119 RXRBP28702 533 aa25.18■■□□□ 1.62
UBXN1-201ENST00000294119 AHDC1Q5TGY3 1603 aaPredicted RBP25.18■■□□□ 1.62
UBXN1-201ENST00000294119 EFCAB6Q5THR3 1501 aa25.17■■□□□ 1.62
UBXN1-201ENST00000294119 SLC26A8Q96RN1 970 aa25.16■■□□□ 1.62
UBXN1-201ENST00000294119 MEX3CQ5U5Q3 659 aaKnown RBP25.12■■□□□ 1.61
UBXN1-201ENST00000294119 DIP2AQ14689 1571 aa25.12■■□□□ 1.61
UBXN1-201ENST00000294119 NCOA3Q9Y6Q9 1424 aa25.1■■□□□ 1.61
UBXN1-201ENST00000294119 CHD2O14647 1828 aaKnown RBP25.09■■□□□ 1.61
UBXN1-201ENST00000294119 DUOX2Q9NRD8 1548 aa25.09■■□□□ 1.61
UBXN1-201ENST00000294119 RGS12O14924 1447 aa25.08■■□□□ 1.61
UBXN1-201ENST00000294119 IDI1Q13907 227 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms