RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 ARHGEF5Q12774 1597 aa14.08□□□□□ -0.16
TFF1-201ENST00000291527 A2ML1A8K2U0 1454 aa14.06□□□□□ -0.16
TFF1-201ENST00000291527 NEURL4Q96JN8 1562 aa14.06□□□□□ -0.16
TFF1-201ENST00000291527 PPP6R1Q9UPN7 881 aa14.05□□□□□ -0.16
TFF1-201ENST00000291527 TNRQ92752 1358 aa14.05□□□□□ -0.16
TFF1-201ENST00000291527 PLA2R1Q13018 1463 aa14.05□□□□□ -0.16
TFF1-201ENST00000291527 KDM5DQ9BY66 1539 aa14.05□□□□□ -0.16
TFF1-201ENST00000291527 PZPP20742 1482 aa14.04□□□□□ -0.16
TFF1-201ENST00000291527 MROH1Q8NDA8 1641 aa14.04□□□□□ -0.16
TFF1-201ENST00000291527 POLR1AO95602 1720 aaPredicted RBP14.04□□□□□ -0.16
TFF1-201ENST00000291527 PKD2Q13563 968 aa14.03□□□□□ -0.16
TFF1-201ENST00000291527 WASHC2CQ9Y4E1 1318 aa14.03□□□□□ -0.16
TFF1-201ENST00000291527 CEP152O94986 1710 aa14.03□□□□□ -0.16
TFF1-201ENST00000291527 MAST1Q9Y2H9 1570 aa14.02□□□□□ -0.16
TFF1-201ENST00000291527 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.02□□□□□ -0.17
TFF1-201ENST00000291527 RNF17Q9BXT8 1623 aaKnown RBP14.01□□□□□ -0.17
TFF1-201ENST00000291527 DISP3Q9P2K9 1392 aa14.01□□□□□ -0.17
TFF1-201ENST00000291527 TSPY4P0CV99 314 aa14.01□□□□□ -0.17
TFF1-201ENST00000291527 TSPY10P0CW01 314 aa14.01□□□□□ -0.17
TFF1-201ENST00000291527 ABCC3O15438 1527 aa14□□□□□ -0.17
TFF1-201ENST00000291527 MIA2Q96PC5 1412 aa14□□□□□ -0.17
TFF1-201ENST00000291527 RSPH4AQ5TD94 716 aa14□□□□□ -0.17
TFF1-201ENST00000291527 STRCP1A6NGW2 1772 aa14□□□□□ -0.17
TFF1-201ENST00000291527 MYOM3Q5VTT5 1437 aa13.99□□□□□ -0.17
TFF1-201ENST00000291527 UBAP1LF5GYI3 381 aa13.99□□□□□ -0.17
TFF1-201ENST00000291527 MAP3K1Q13233 1512 aa13.99□□□□□ -0.17
TFF1-201ENST00000291527 IQSEC2Q5JU85 1478 aa13.99□□□□□ -0.17
TFF1-201ENST00000291527 ABCC5O15440 1437 aa13.98□□□□□ -0.17
TFF1-201ENST00000291527 VWDEQ8N2E2 1590 aa13.97□□□□□ -0.17
TFF1-201ENST00000291527 CROCC2H7BZ55 1655 aa13.96□□□□□ -0.17
TFF1-201ENST00000291527 RRP7BPQ9NSQ0 103 aa13.96□□□□□ -0.17
TFF1-201ENST00000291527 PTPN23Q9H3S7 1636 aa13.96□□□□□ -0.17
TFF1-201ENST00000291527 ALKQ9UM73 1620 aa13.96□□□□□ -0.17
TFF1-201ENST00000291527 SPATA31D1Q6ZQQ2 1576 aa13.96□□□□□ -0.18
TFF1-201ENST00000291527 UGGT1Q9NYU2 1555 aa13.96□□□□□ -0.18
TFF1-201ENST00000291527 ERVK-7P63135 1459 aa13.94□□□□□ -0.18
TFF1-201ENST00000291527 SHANK2Q9UPX8 1470 aa13.94□□□□□ -0.18
TFF1-201ENST00000291527 EIF2AK4Q9P2K8 1649 aaKnown RBP13.94□□□□□ -0.18
TFF1-201ENST00000291527 FAM135AQ9P2D6 1515 aa13.94□□□□□ -0.18
TFF1-201ENST00000291527 UBR1Q8IWV7 1749 aa13.93□□□□□ -0.18
TFF1-201ENST00000291527 ANKLE2Q86XL3 938 aa13.93□□□□□ -0.18
TFF1-201ENST00000291527 CHIC2Q9UKJ5 165 aa13.93□□□□□ -0.18
TFF1-201ENST00000291527 NLRP1Q9C000 1473 aa13.93□□□□□ -0.18
TFF1-201ENST00000291527 ZC3H13Q5T200 1668 aaKnown RBP13.92□□□□□ -0.18
TFF1-201ENST00000291527 DUOX2Q9NRD8 1548 aa13.92□□□□□ -0.18
TFF1-201ENST00000291527 DEPDC5O75140 1603 aa13.92□□□□□ -0.18
TFF1-201ENST00000291527 IQGAP1P46940 1657 aa13.91□□□□□ -0.18
TFF1-201ENST00000291527 NPHP4O75161 1426 aaPredicted RBP13.91□□□□□ -0.18
TFF1-201ENST00000291527 LTKP29376 864 aa13.91□□□□□ -0.18
TFF1-201ENST00000291527 PIP4K2BP78356 416 aa13.91□□□□□ -0.18
TFF1-201ENST00000291527 THEMISQ8N1K5 641 aaPredicted RBP13.91□□□□□ -0.18
TFF1-201ENST00000291527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.91□□□□□ -0.18
TFF1-201ENST00000291527 KIF15Q9NS87 1388 aa13.91□□□□□ -0.18
TFF1-201ENST00000291527 MED14O60244 1454 aa13.91□□□□□ -0.18
TFF1-201ENST00000291527 DAPK1P53355 1430 aa13.9□□□□□ -0.18
TFF1-201ENST00000291527 HSPA1LP34931 641 aa13.9□□□□□ -0.18
TFF1-201ENST00000291527 FGD6Q6ZV73 1430 aa13.89□□□□□ -0.19
TFF1-201ENST00000291527 XIRP1Q702N8 1843 aaKnown RBP13.88□□□□□ -0.19
TFF1-201ENST00000291527 PRDM15P57071 1507 aaPredicted RBP13.88□□□□□ -0.19
TFF1-201ENST00000291527 SCAF1Q9H7N4 1312 aaKnown RBP13.88□□□□□ -0.19
TFF1-201ENST00000291527 PIK3C2BO00750 1634 aa13.87□□□□□ -0.19
TFF1-201ENST00000291527 SENP3Q9H4L4 574 aaPredicted RBP13.87□□□□□ -0.19
TFF1-201ENST00000291527 CPS1P31327 1500 aa13.86□□□□□ -0.19
TFF1-201ENST00000291527 LRRC7Q96NW7 1537 aa13.85□□□□□ -0.19
TFF1-201ENST00000291527 ERBINQ96RT1 1412 aa13.84□□□□□ -0.19
TFF1-201ENST00000291527 SOCS7O14512 581 aa13.84□□□□□ -0.19
TFF1-201ENST00000291527 ARHGAP23Q9P227 1491 aa13.84□□□□□ -0.19
TFF1-201ENST00000291527 SYNMO15061 1565 aa13.83□□□□□ -0.19
TFF1-201ENST00000291527 ARHGAP31Q2M1Z3 1444 aa13.83□□□□□ -0.2
TFF1-201ENST00000291527 MYO5BQ9ULV0 1848 aa13.83□□□□□ -0.2
TFF1-201ENST00000291527 IDI1Q13907 227 aa13.82□□□□□ -0.2
TFF1-201ENST00000291527 TXNDC2Q86VQ3 553 aa13.82□□□□□ -0.2
TFF1-201ENST00000291527 SCAF11Q99590 1463 aaKnown RBP13.81□□□□□ -0.2
TFF1-201ENST00000291527 SLIT1O75093 1534 aa13.81□□□□□ -0.2
TFF1-201ENST00000291527 APLP2Q06481 763 aa13.81□□□□□ -0.2
TFF1-201ENST00000291527 MED1Q15648 1581 aaPredicted RBP13.8□□□□□ -0.2
TFF1-201ENST00000291527 TOM1O60784 492 aa13.8□□□□□ -0.2
TFF1-201ENST00000291527 RBM33Q96EV2 1170 aaKnown RBP13.8□□□□□ -0.2
TFF1-201ENST00000291527 FAM50AQ14320 339 aaKnown RBP13.79□□□□□ -0.2
TFF1-201ENST00000291527 PPARGC1BQ86YN6 1023 aaKnown RBP13.79□□□□□ -0.2
TFF1-201ENST00000291527 LMTK2Q8IWU2 1503 aa13.79□□□□□ -0.2
TFF1-201ENST00000291527 ANKRD30AQ9BXX3 1397 aa13.78□□□□□ -0.2
TFF1-201ENST00000291527 ADGRL2O95490 1459 aa13.77□□□□□ -0.21
TFF1-201ENST00000291527 TMEM2Q9UHN6 1383 aa13.77□□□□□ -0.21
TFF1-201ENST00000291527 TET3O43151 1660 aa13.76□□□□□ -0.21
TFF1-201ENST00000291527 NOS1P29475 1434 aa13.76□□□□□ -0.21
TFF1-201ENST00000291527 SLC26A8Q96RN1 970 aa13.76□□□□□ -0.21
TFF1-201ENST00000291527 EFCAB6Q5THR3 1501 aa13.75□□□□□ -0.21
TFF1-201ENST00000291527 KANK1Q14678 1352 aa13.73□□□□□ -0.21
TFF1-201ENST00000291527 STAG3Q9UJ98 1225 aa13.72□□□□□ -0.21
TFF1-201ENST00000291527 KDM5AP29375 1690 aaKnown RBP13.72□□□□□ -0.21
TFF1-201ENST00000291527 GCC2Q8IWJ2 1684 aa13.72□□□□□ -0.21
TFF1-201ENST00000291527 ANKRD50Q9ULJ7 1429 aa13.72□□□□□ -0.21
TFF1-201ENST00000291527 ADGRB3O60242 1522 aa13.71□□□□□ -0.21
TFF1-201ENST00000291527 EID1Q9Y6B2 187 aa13.71□□□□□ -0.21
TFF1-201ENST00000291527 E9PCH4 1651 aa13.7□□□□□ -0.22
TFF1-201ENST00000291527 NUTM2DQ5VT03 806 aaPredicted RBP13.7□□□□□ -0.22
TFF1-201ENST00000291527 TMEM131LA2VDJ0 1609 aa13.69□□□□□ -0.22
TFF1-201ENST00000291527 RGS17Q9UGC6 210 aaPredicted RBP13.69□□□□□ -0.22
TFF1-201ENST00000291527 TMEM94Q12767 1356 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms