RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 NCOA1Q15788 1441 aa16.33■□□□□ 0.2
SNF8-201ENST00000290330 KDM5DQ9BY66 1539 aa16.33■□□□□ 0.2
SNF8-201ENST00000290330 FAM135AQ9P2D6 1515 aa16.33■□□□□ 0.2
SNF8-201ENST00000290330 FBXO31Q5XUX0 539 aaPredicted RBP16.32■□□□□ 0.2
SNF8-201ENST00000290330 FGD6Q6ZV73 1430 aa16.32■□□□□ 0.2
SNF8-201ENST00000290330 CERKQ8TCT0 537 aa16.32■□□□□ 0.2
SNF8-201ENST00000290330 PTPN23Q9H3S7 1636 aa16.32■□□□□ 0.2
SNF8-201ENST00000290330 CAMSAP1Q5T5Y3 1602 aa16.3■□□□□ 0.2
SNF8-201ENST00000290330 MYO3AQ8NEV4 1616 aa16.3■□□□□ 0.2
SNF8-201ENST00000290330 TCOF1Q13428 1488 aaKnown RBP16.3■□□□□ 0.2
SNF8-201ENST00000290330 PZPP20742 1482 aa16.29■□□□□ 0.2
SNF8-201ENST00000290330 SHANK2Q9UPX8 1470 aa16.29■□□□□ 0.2
SNF8-201ENST00000290330 CEP170BQ9Y4F5 1589 aaPredicted RBP16.29■□□□□ 0.2
SNF8-201ENST00000290330 DAPK1P53355 1430 aa16.28■□□□□ 0.2
SNF8-201ENST00000290330 TNRQ92752 1358 aa16.28■□□□□ 0.2
SNF8-201ENST00000290330 RRP7BPQ9NSQ0 103 aa16.28■□□□□ 0.2
SNF8-201ENST00000290330 DUOX2Q9NRD8 1548 aa16.28■□□□□ 0.2
SNF8-201ENST00000290330 ZNF142P52746 1687 aaPredicted RBP16.27■□□□□ 0.2
SNF8-201ENST00000290330 KIF15Q9NS87 1388 aa16.27■□□□□ 0.2
SNF8-201ENST00000290330 RNF17Q9BXT8 1623 aaKnown RBP16.27■□□□□ 0.2
SNF8-201ENST00000290330 EIF2AK4Q9P2K8 1649 aaKnown RBP16.27■□□□□ 0.2
SNF8-201ENST00000290330 NCKAP5LQ9HCH0 1330 aa16.27■□□□□ 0.2
SNF8-201ENST00000290330 FOXD1Q16676 465 aa16.27■□□□□ 0.2
SNF8-201ENST00000290330 A2ML1A8K2U0 1454 aa16.27■□□□□ 0.19
SNF8-201ENST00000290330 PLA2R1Q13018 1463 aa16.27■□□□□ 0.19
SNF8-201ENST00000290330 DNMT1P26358 1616 aaKnown RBP16.26■□□□□ 0.19
SNF8-201ENST00000290330 PKD2Q13563 968 aa16.25■□□□□ 0.19
SNF8-201ENST00000290330 ABCC3O15438 1527 aa16.24■□□□□ 0.19
SNF8-201ENST00000290330 CROCC2H7BZ55 1655 aa16.24■□□□□ 0.19
SNF8-201ENST00000290330 MROH1Q8NDA8 1641 aa16.24■□□□□ 0.19
SNF8-201ENST00000290330 CHIC2Q9UKJ5 165 aa16.24■□□□□ 0.19
SNF8-201ENST00000290330 ERBINQ96RT1 1412 aa16.24■□□□□ 0.19
SNF8-201ENST00000290330 ANKRD30AQ9BXX3 1397 aa16.22■□□□□ 0.19
SNF8-201ENST00000290330 ZC3H13Q5T200 1668 aaKnown RBP16.21■□□□□ 0.19
SNF8-201ENST00000290330 FAM50AQ14320 339 aaKnown RBP16.21■□□□□ 0.19
SNF8-201ENST00000290330 NLRP1Q9C000 1473 aa16.21■□□□□ 0.19
SNF8-201ENST00000290330 LTBP4Q8N2S1 1624 aa16.19■□□□□ 0.18
SNF8-201ENST00000290330 PRDM15P57071 1507 aaPredicted RBP16.19■□□□□ 0.18
SNF8-201ENST00000290330 SPATA31D1Q6ZQQ2 1576 aa16.18■□□□□ 0.18
SNF8-201ENST00000290330 THEMISQ8N1K5 641 aaPredicted RBP16.18■□□□□ 0.18
SNF8-201ENST00000290330 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.18■□□□□ 0.181e-6■■■■□ 19.4
SNF8-201ENST00000290330 ERVK-7P63135 1459 aa16.17■□□□□ 0.18
SNF8-201ENST00000290330 ZNF335Q9H4Z2 1342 aaPredicted RBP16.17■□□□□ 0.18
SNF8-201ENST00000290330 ADGRL2O95490 1459 aa16.16■□□□□ 0.18
SNF8-201ENST00000290330 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.16■□□□□ 0.183e-6■□□□□ 10.3
SNF8-201ENST00000290330 ARHGAP31Q2M1Z3 1444 aa16.16■□□□□ 0.18
SNF8-201ENST00000290330 UGGT1Q9NYU2 1555 aa16.16■□□□□ 0.18
SNF8-201ENST00000290330 CEP152O94986 1710 aa16.15■□□□□ 0.18
SNF8-201ENST00000290330 ANKLE2Q86XL3 938 aa16.15■□□□□ 0.18
SNF8-201ENST00000290330 KANK1Q14678 1352 aa16.14■□□□□ 0.17
SNF8-201ENST00000290330 DEPDC5O75140 1603 aa16.14■□□□□ 0.17
SNF8-201ENST00000290330 PPARGC1BQ86YN6 1023 aaKnown RBP16.12■□□□□ 0.17
SNF8-201ENST00000290330 NEURL4Q96JN8 1562 aa16.12■□□□□ 0.17
SNF8-201ENST00000290330 IQSEC2Q5JU85 1478 aa16.11■□□□□ 0.17
SNF8-201ENST00000290330 ANKRD50Q9ULJ7 1429 aa16.11■□□□□ 0.17
SNF8-201ENST00000290330 LMTK2Q8IWU2 1503 aa16.1■□□□□ 0.17
SNF8-201ENST00000290330 VWDEQ8N2E2 1590 aa16.1■□□□□ 0.17
SNF8-201ENST00000290330 POLR1AO95602 1720 aaPredicted RBP16.09■□□□□ 0.17
SNF8-201ENST00000290330 MED14O60244 1454 aa16.09■□□□□ 0.17
SNF8-201ENST00000290330 NPHP4O75161 1426 aaPredicted RBP16.08■□□□□ 0.16
SNF8-201ENST00000290330 CFAP65Q6ZU64 1925 aaKnown RBP16.07■□□□□ 0.16
SNF8-201ENST00000290330 POTEDQ86YR6 584 aa16.07■□□□□ 0.16
SNF8-201ENST00000290330 ROCK1Q13464 1354 aa16.06■□□□□ 0.16
SNF8-201ENST00000290330 UBR1Q8IWV7 1749 aa16.05■□□□□ 0.16
SNF8-201ENST00000290330 IDI1Q13907 227 aa16.04■□□□□ 0.16
SNF8-201ENST00000290330 NOS1P29475 1434 aa16.03■□□□□ 0.16
SNF8-201ENST00000290330 ITGAEP38570 1179 aa16.03■□□□□ 0.16
SNF8-201ENST00000290330 EFCAB6Q5THR3 1501 aa16.03■□□□□ 0.16
SNF8-201ENST00000290330 ARHGAP23Q9P227 1491 aa16.03■□□□□ 0.16
SNF8-201ENST00000290330 LTKP29376 864 aa16.02■□□□□ 0.16
SNF8-201ENST00000290330 TXNDC2Q86VQ3 553 aa16.02■□□□□ 0.16
SNF8-201ENST00000290330 SLIT1O75093 1534 aa16.02■□□□□ 0.15
SNF8-201ENST00000290330 CPS1P31327 1500 aa16.01■□□□□ 0.15
SNF8-201ENST00000290330 STAG3Q9UJ98 1225 aa16.01■□□□□ 0.15
SNF8-201ENST00000290330 SCAF11Q99590 1463 aaKnown RBP16.01■□□□□ 0.15
SNF8-201ENST00000290330 IQGAP1P46940 1657 aa16.01■□□□□ 0.15
SNF8-201ENST00000290330 PIK3C2BO00750 1634 aa16.01■□□□□ 0.15
SNF8-201ENST00000290330 RPRD2Q5VT52 1461 aaKnown RBP16■□□□□ 0.15
SNF8-201ENST00000290330 UBAP1LF5GYI3 381 aa16■□□□□ 0.15
SNF8-201ENST00000290330 SYNMO15061 1565 aa16■□□□□ 0.15
SNF8-201ENST00000290330 TMEM2Q9UHN6 1383 aa16■□□□□ 0.15
SNF8-201ENST00000290330 SLC52A1Q9NWF4 448 aa15.99■□□□□ 0.15
SNF8-201ENST00000290330 EID1Q9Y6B2 187 aa15.99■□□□□ 0.15
SNF8-201ENST00000290330 UNC13BO14795 1591 aa15.98■□□□□ 0.15
SNF8-201ENST00000290330 TET3O43151 1660 aa15.96■□□□□ 0.15
SNF8-201ENST00000290330 RRBP1Q9P2E9 1410 aaKnown RBP15.96■□□□□ 0.15
SNF8-201ENST00000290330 KDM5AP29375 1690 aaKnown RBP15.95■□□□□ 0.14
SNF8-201ENST00000290330 NUP155O75694 1391 aa15.94■□□□□ 0.14
SNF8-201ENST00000290330 TOM1O60784 492 aa15.93■□□□□ 0.14
SNF8-201ENST00000290330 ADGRB3O60242 1522 aa15.93■□□□□ 0.14
SNF8-201ENST00000290330 GCC2Q8IWJ2 1684 aa15.92■□□□□ 0.14
SNF8-201ENST00000290330 IQGAP3Q86VI3 1631 aa15.91■□□□□ 0.14
SNF8-201ENST00000290330 STRCP1A6NGW2 1772 aa15.91■□□□□ 0.14
SNF8-201ENST00000290330 LRRC7Q96NW7 1537 aa15.91■□□□□ 0.14
SNF8-201ENST00000290330 E9PCH4 1651 aa15.89■□□□□ 0.13
SNF8-201ENST00000290330 PIP4K2BP78356 416 aa15.88■□□□□ 0.13
SNF8-201ENST00000290330 SLC26A8Q96RN1 970 aa15.88■□□□□ 0.13
SNF8-201ENST00000290330 ZFYVE9O95405 1425 aa15.87■□□□□ 0.13
SNF8-201ENST00000290330 SCAF1Q9H7N4 1312 aaKnown RBP15.87■□□□□ 0.13
SNF8-201ENST00000290330 NAIPQ13075 1403 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms