RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 NCKAP5LQ9HCH0 1330 aa14.96□□□□□ -0.01
HMHB1-201ENST00000289448 WASHC2CQ9Y4E1 1318 aa14.96□□□□□ -0.01
HMHB1-201ENST00000289448 MYO3AQ8NEV4 1616 aa14.95□□□□□ -0.02
HMHB1-201ENST00000289448 ABCC5O15440 1437 aa14.95□□□□□ -0.02
HMHB1-201ENST00000289448 KDM5DQ9BY66 1539 aa14.95□□□□□ -0.02
HMHB1-201ENST00000289448 CEP170BQ9Y4F5 1589 aaPredicted RBP14.94□□□□□ -0.02
HMHB1-201ENST00000289448 PZPP20742 1482 aa14.93□□□□□ -0.02
HMHB1-201ENST00000289448 FGD6Q6ZV73 1430 aa14.92□□□□□ -0.02
HMHB1-201ENST00000289448 PTPN23Q9H3S7 1636 aa14.92□□□□□ -0.02
HMHB1-201ENST00000289448 TNRQ92752 1358 aa14.92□□□□□ -0.02
HMHB1-201ENST00000289448 ZNF142P52746 1687 aaPredicted RBP14.92□□□□□ -0.02
HMHB1-201ENST00000289448 FAM135AQ9P2D6 1515 aa14.92□□□□□ -0.02
HMHB1-201ENST00000289448 A2ML1A8K2U0 1454 aa14.91□□□□□ -0.02
HMHB1-201ENST00000289448 RRP7BPQ9NSQ0 103 aa14.91□□□□□ -0.02
HMHB1-201ENST00000289448 RNF17Q9BXT8 1623 aaKnown RBP14.91□□□□□ -0.02
HMHB1-201ENST00000289448 PLA2R1Q13018 1463 aa14.9□□□□□ -0.02
HMHB1-201ENST00000289448 TCOF1Q13428 1488 aaKnown RBP14.9□□□□□ -0.02
HMHB1-201ENST00000289448 KIF15Q9NS87 1388 aa14.9□□□□□ -0.02
HMHB1-201ENST00000289448 ABCC3O15438 1527 aa14.9□□□□□ -0.02
HMHB1-201ENST00000289448 DAPK1P53355 1430 aa14.9□□□□□ -0.02
HMHB1-201ENST00000289448 LTBP4Q8N2S1 1624 aa14.89□□□□□ -0.03
HMHB1-201ENST00000289448 MROH1Q8NDA8 1641 aa14.89□□□□□ -0.03
HMHB1-201ENST00000289448 DUOX2Q9NRD8 1548 aa14.89□□□□□ -0.03
HMHB1-201ENST00000289448 PKD2Q13563 968 aa14.89□□□□□ -0.03
HMHB1-201ENST00000289448 SHANK2Q9UPX8 1470 aa14.89□□□□□ -0.03
HMHB1-201ENST00000289448 DNMT1P26358 1616 aaKnown RBP14.88□□□□□ -0.03
HMHB1-201ENST00000289448 CHIC2Q9UKJ5 165 aa14.88□□□□□ -0.03
HMHB1-201ENST00000289448 EIF2AK4Q9P2K8 1649 aaKnown RBP14.87□□□□□ -0.03
HMHB1-201ENST00000289448 ZNF335Q9H4Z2 1342 aaPredicted RBP14.87□□□□□ -0.03
HMHB1-201ENST00000289448 CROCC2H7BZ55 1655 aa14.86□□□□□ -0.03
HMHB1-201ENST00000289448 ERBINQ96RT1 1412 aa14.84□□□□□ -0.03
HMHB1-201ENST00000289448 NLRP1Q9C000 1473 aa14.83□□□□□ -0.03
HMHB1-201ENST00000289448 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.83□□□□□ -0.04
HMHB1-201ENST00000289448 ERVK-7P63135 1459 aa14.82□□□□□ -0.04
HMHB1-201ENST00000289448 SPATA31D1Q6ZQQ2 1576 aa14.82□□□□□ -0.04
HMHB1-201ENST00000289448 FAM50AQ14320 339 aaKnown RBP14.82□□□□□ -0.04
HMHB1-201ENST00000289448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.82□□□□□ -0.04
HMHB1-201ENST00000289448 ANKRD30AQ9BXX3 1397 aa14.82□□□□□ -0.04
HMHB1-201ENST00000289448 ZC3H13Q5T200 1668 aaKnown RBP14.81□□□□□ -0.04
HMHB1-201ENST00000289448 THEMISQ8N1K5 641 aaPredicted RBP14.81□□□□□ -0.04
HMHB1-201ENST00000289448 PRDM15P57071 1507 aaPredicted RBP14.81□□□□□ -0.04
HMHB1-201ENST00000289448 NEURL4Q96JN8 1562 aa14.81□□□□□ -0.04
HMHB1-201ENST00000289448 UGGT1Q9NYU2 1555 aa14.81□□□□□ -0.04
HMHB1-201ENST00000289448 CEP152O94986 1710 aa14.8□□□□□ -0.04
HMHB1-201ENST00000289448 ANKLE2Q86XL3 938 aa14.79□□□□□ -0.04
HMHB1-201ENST00000289448 ADGRL2O95490 1459 aa14.78□□□□□ -0.04
HMHB1-201ENST00000289448 ARHGAP31Q2M1Z3 1444 aa14.78□□□□□ -0.04
HMHB1-201ENST00000289448 DEPDC5O75140 1603 aa14.77□□□□□ -0.04
HMHB1-201ENST00000289448 CFAP65Q6ZU64 1925 aaKnown RBP14.77□□□□□ -0.04
HMHB1-201ENST00000289448 PPARGC1BQ86YN6 1023 aaKnown RBP14.77□□□□□ -0.05
HMHB1-201ENST00000289448 IQSEC2Q5JU85 1478 aa14.76□□□□□ -0.05
HMHB1-201ENST00000289448 VWDEQ8N2E2 1590 aa14.75□□□□□ -0.05
HMHB1-201ENST00000289448 MED14O60244 1454 aa14.75□□□□□ -0.05
HMHB1-201ENST00000289448 POLR1AO95602 1720 aaPredicted RBP14.75□□□□□ -0.05
HMHB1-201ENST00000289448 NPHP4O75161 1426 aaPredicted RBP14.75□□□□□ -0.05
HMHB1-201ENST00000289448 KANK1Q14678 1352 aa14.74□□□□□ -0.05
HMHB1-201ENST00000289448 LMTK2Q8IWU2 1503 aa14.73□□□□□ -0.05
HMHB1-201ENST00000289448 ANKRD50Q9ULJ7 1429 aa14.73□□□□□ -0.05
HMHB1-201ENST00000289448 LTKP29376 864 aa14.72□□□□□ -0.05
HMHB1-201ENST00000289448 UBAP1LF5GYI3 381 aa14.71□□□□□ -0.05
HMHB1-201ENST00000289448 UBR1Q8IWV7 1749 aa14.71□□□□□ -0.05
HMHB1-201ENST00000289448 IDI1Q13907 227 aa14.7□□□□□ -0.06
HMHB1-201ENST00000289448 ARHGAP23Q9P227 1491 aa14.69□□□□□ -0.06
HMHB1-201ENST00000289448 NOS1P29475 1434 aa14.68□□□□□ -0.06
HMHB1-201ENST00000289448 TXNDC2Q86VQ3 553 aa14.68□□□□□ -0.06
HMHB1-201ENST00000289448 IQGAP1P46940 1657 aa14.68□□□□□ -0.06
HMHB1-201ENST00000289448 SLIT1O75093 1534 aa14.67□□□□□ -0.06
HMHB1-201ENST00000289448 EFCAB6Q5THR3 1501 aa14.67□□□□□ -0.06
HMHB1-201ENST00000289448 ROCK1Q13464 1354 aa14.67□□□□□ -0.06
HMHB1-201ENST00000289448 SCAF11Q99590 1463 aaKnown RBP14.67□□□□□ -0.06
HMHB1-201ENST00000289448 SYNMO15061 1565 aa14.67□□□□□ -0.06
HMHB1-201ENST00000289448 CPS1P31327 1500 aa14.66□□□□□ -0.06
HMHB1-201ENST00000289448 PIK3C2BO00750 1634 aa14.66□□□□□ -0.06
HMHB1-201ENST00000289448 TMEM2Q9UHN6 1383 aa14.66□□□□□ -0.06
HMHB1-201ENST00000289448 ITGAEP38570 1179 aa14.66□□□□□ -0.06
HMHB1-201ENST00000289448 STAG3Q9UJ98 1225 aa14.64□□□□□ -0.07
HMHB1-201ENST00000289448 EID1Q9Y6B2 187 aa14.63□□□□□ -0.07
HMHB1-201ENST00000289448 STRCP1A6NGW2 1772 aa14.62□□□□□ -0.07
HMHB1-201ENST00000289448 SLC52A1Q9NWF4 448 aa14.62□□□□□ -0.07
HMHB1-201ENST00000289448 RPRD2Q5VT52 1461 aaKnown RBP14.62□□□□□ -0.07
HMHB1-201ENST00000289448 LRRC7Q96NW7 1537 aa14.61□□□□□ -0.07
HMHB1-201ENST00000289448 UNC13BO14795 1591 aa14.6□□□□□ -0.07
HMHB1-201ENST00000289448 ALKQ9UM73 1620 aa14.6□□□□□ -0.07
HMHB1-201ENST00000289448 TOM1O60784 492 aa14.6□□□□□ -0.07
HMHB1-201ENST00000289448 PIP4K2BP78356 416 aa14.6□□□□□ -0.07
HMHB1-201ENST00000289448 TET3O43151 1660 aa14.59□□□□□ -0.07
HMHB1-201ENST00000289448 ADGRB3O60242 1522 aa14.59□□□□□ -0.07
HMHB1-201ENST00000289448 KDM5AP29375 1690 aaKnown RBP14.58□□□□□ -0.07
HMHB1-201ENST00000289448 SCAF1Q9H7N4 1312 aaKnown RBP14.58□□□□□ -0.08
HMHB1-201ENST00000289448 NUP155O75694 1391 aa14.58□□□□□ -0.08
HMHB1-201ENST00000289448 DISP3Q9P2K9 1392 aa14.58□□□□□ -0.08
HMHB1-201ENST00000289448 RRBP1Q9P2E9 1410 aaKnown RBP14.58□□□□□ -0.08
HMHB1-201ENST00000289448 HSPA1LP34931 641 aa14.57□□□□□ -0.08
HMHB1-201ENST00000289448 SLC26A8Q96RN1 970 aa14.57□□□□□ -0.08
HMHB1-201ENST00000289448 ILDR2Q71H61 639 aa14.55□□□□□ -0.08
HMHB1-201ENST00000289448 SENP3Q9H4L4 574 aaPredicted RBP14.55□□□□□ -0.08
HMHB1-201ENST00000289448 ZFYVE9O95405 1425 aa14.55□□□□□ -0.08
HMHB1-201ENST00000289448 IQGAP3Q86VI3 1631 aa14.55□□□□□ -0.08
HMHB1-201ENST00000289448 E9PCH4 1651 aa14.55□□□□□ -0.08
HMHB1-201ENST00000289448 GCC2Q8IWJ2 1684 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms