RNA–Protein interactions for RNA: ENST00000289316.2

HIST1H2BD-201, Transcript of histone cluster 1 H2B family member d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIST1H2BD, Length 789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BD-201ENST00000289316 DCBLD2Q96PD2 775 aa8.73□□□□□ -1.01
HIST1H2BD-201ENST00000289316 SETD1AO15047 1707 aaKnown RBP8.73□□□□□ -1.01
HIST1H2BD-201ENST00000289316 HECW1Q76N89 1606 aa8.72□□□□□ -1.01
HIST1H2BD-201ENST00000289316 ALKQ9UM73 1620 aa8.72□□□□□ -1.01
HIST1H2BD-201ENST00000289316 SHANK2Q9UPX8 1470 aa8.71□□□□□ -1.01
HIST1H2BD-201ENST00000289316 RAPGEF2Q9Y4G8 1499 aa8.71□□□□□ -1.01
HIST1H2BD-201ENST00000289316 PHF12Q96QT6 1004 aa8.71□□□□□ -1.02
HIST1H2BD-201ENST00000289316 C3P01024 1663 aa8.71□□□□□ -1.02
HIST1H2BD-201ENST00000289316 GALR2O43603 387 aaPredicted RBP8.7□□□□□ -1.02
HIST1H2BD-201ENST00000289316 NPATQ14207 1427 aa8.7□□□□□ -1.02
HIST1H2BD-201ENST00000289316 GOLGA3Q08378 1498 aa8.7□□□□□ -1.02
HIST1H2BD-201ENST00000289316 SCAPERQ9BY12 1400 aa8.69□□□□□ -1.02
HIST1H2BD-201ENST00000289316 TRIM52Q96A61 297 aa8.67□□□□□ -1.02
HIST1H2BD-201ENST00000289316 CFAP74Q9C0B2 1584 aa8.67□□□□□ -1.02
HIST1H2BD-201ENST00000289316 CNTLNQ9NXG0 1405 aa8.67□□□□□ -1.02
HIST1H2BD-201ENST00000289316 PLEKHD1A6NEE1 506 aa8.64□□□□□ -1.03
HIST1H2BD-201ENST00000289316 RBM33Q96EV2 1170 aaKnown RBP8.64□□□□□ -1.03
HIST1H2BD-201ENST00000289316 AGLP35573 1532 aa8.64□□□□□ -1.03
HIST1H2BD-201ENST00000289316 ZMYM3Q14202 1370 aa8.63□□□□□ -1.03
HIST1H2BD-201ENST00000289316 PLEKHG5O94827 1062 aa8.63□□□□□ -1.03
HIST1H2BD-201ENST00000289316 ZNF772Q68DY9 489 aaPredicted RBP8.62□□□□□ -1.03
HIST1H2BD-201ENST00000289316 MYT1LQ9UL68 1186 aa8.62□□□□□ -1.03
HIST1H2BD-201ENST00000289316 MIER1Q8N108 512 aa8.61□□□□□ -1.03
HIST1H2BD-201ENST00000289316 TSPYL2Q9H2G4 693 aaPredicted RBP8.61□□□□□ -1.03
HIST1H2BD-201ENST00000289316 RXRBP28702 533 aa8.6□□□□□ -1.03
HIST1H2BD-201ENST00000289316 AFAP1Q8N556 730 aa8.6□□□□□ -1.03
HIST1H2BD-201ENST00000289316 FAM135BQ49AJ0 1406 aa8.6□□□□□ -1.03
HIST1H2BD-201ENST00000289316 CEP170BQ9Y4F5 1589 aaPredicted RBP8.6□□□□□ -1.03
HIST1H2BD-201ENST00000289316 FKBP8Q14318 412 aa8.59□□□□□ -1.03
HIST1H2BD-201ENST00000289316 MS4A3Q96HJ5 214 aa8.59□□□□□ -1.03
HIST1H2BD-201ENST00000289316 VWDEQ8N2E2 1590 aa8.59□□□□□ -1.03
HIST1H2BD-201ENST00000289316 REREQ9P2R6 1566 aa8.59□□□□□ -1.03
HIST1H2BD-201ENST00000289316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.59□□□□□ -1.034e-43■□□□□ 10.2
HIST1H2BD-201ENST00000289316 LRRC7Q96NW7 1537 aa8.59□□□□□ -1.03
HIST1H2BD-201ENST00000289316 PLCH2O75038 1416 aa8.58□□□□□ -1.04
HIST1H2BD-201ENST00000289316 EFCAB2Q5VUJ9 269 aa8.58□□□□□ -1.04
HIST1H2BD-201ENST00000289316 ANKLE2Q86XL3 938 aa8.58□□□□□ -1.04
HIST1H2BD-201ENST00000289316 ZNF142P52746 1687 aaPredicted RBP8.58□□□□□ -1.04
HIST1H2BD-201ENST00000289316 P3H3Q8IVL6 736 aa8.57□□□□□ -1.04
HIST1H2BD-201ENST00000289316 PLCD3Q8N3E9 789 aa8.57□□□□□ -1.04
HIST1H2BD-201ENST00000289316 CCDC61Q9Y6R9 512 aa8.57□□□□□ -1.04
HIST1H2BD-201ENST00000289316 ZNF518AQ6AHZ1 1483 aa8.57□□□□□ -1.04
HIST1H2BD-201ENST00000289316 CDK12Q9NYV4 1490 aaPredicted RBP8.57□□□□□ -1.04
HIST1H2BD-201ENST00000289316 SETBP1Q9Y6X0 1596 aa8.56□□□□□ -1.04
HIST1H2BD-201ENST00000289316 RNF17Q9BXT8 1623 aaKnown RBP8.56□□□□□ -1.04
HIST1H2BD-201ENST00000289316 MYO3AQ8NEV4 1616 aa8.55□□□□□ -1.04
HIST1H2BD-201ENST00000289316 A2ML1A8K2U0 1454 aa8.55□□□□□ -1.04
HIST1H2BD-201ENST00000289316 NEURL4Q96JN8 1562 aa8.55□□□□□ -1.04
HIST1H2BD-201ENST00000289316 DIP2CQ9Y2E4 1556 aa8.55□□□□□ -1.04
HIST1H2BD-201ENST00000289316 SUPT6HQ7KZ85 1726 aaKnown RBP8.54□□□□□ -1.04
HIST1H2BD-201ENST00000289316 RASEFQ8IZ41 740 aa8.54□□□□□ -1.04
HIST1H2BD-201ENST00000289316 MROH2AA6NES4 1674 aa8.53□□□□□ -1.04
HIST1H2BD-201ENST00000289316 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.53□□□□□ -1.04
HIST1H2BD-201ENST00000289316 JCADQ9P266 1359 aa8.53□□□□□ -1.04
HIST1H2BD-201ENST00000289316 MEX3CQ5U5Q3 659 aaKnown RBP8.53□□□□□ -1.04
HIST1H2BD-201ENST00000289316 KDM5CP41229 1560 aa8.52□□□□□ -1.04
HIST1H2BD-201ENST00000289316 NUP153P49790 1475 aaKnown RBP8.52□□□□□ -1.05
HIST1H2BD-201ENST00000289316 MLH3Q9UHC1 1453 aa8.52□□□□□ -1.05
HIST1H2BD-201ENST00000289316 ASTLQ6HA08 431 aaPredicted RBP8.52□□□□□ -1.05
HIST1H2BD-201ENST00000289316 PELP1Q8IZL8 1130 aaKnown RBP8.52□□□□□ -1.05
HIST1H2BD-201ENST00000289316 NPHP4O75161 1426 aaPredicted RBP8.52□□□□□ -1.05
HIST1H2BD-201ENST00000289316 MED14O60244 1454 aa8.51□□□□□ -1.05
HIST1H2BD-201ENST00000289316 DNMT1P26358 1616 aaKnown RBP8.51□□□□□ -1.05
HIST1H2BD-201ENST00000289316 KIF12Q96FN5 646 aa8.51□□□□□ -1.05
HIST1H2BD-201ENST00000289316 ZBTB47Q9UFB7 747 aaPredicted RBP8.51□□□□□ -1.05
HIST1H2BD-201ENST00000289316 RAPGEF6Q8TEU7 1601 aa8.51□□□□□ -1.05
HIST1H2BD-201ENST00000289316 NUTM2BA6NNL0 878 aaPredicted RBP8.5□□□□□ -1.05
HIST1H2BD-201ENST00000289316 NUTM2EB1AL46 878 aaPredicted RBP8.5□□□□□ -1.05
HIST1H2BD-201ENST00000289316 ATMINO43313 823 aaPredicted RBP8.5□□□□□ -1.05
HIST1H2BD-201ENST00000289316 YY1P25490 414 aa8.5□□□□□ -1.05
HIST1H2BD-201ENST00000289316 NUTM2DQ5VT03 806 aaPredicted RBP8.5□□□□□ -1.05
HIST1H2BD-201ENST00000289316 NUTM2AQ8IVF1 878 aaPredicted RBP8.5□□□□□ -1.05
HIST1H2BD-201ENST00000289316 THEMISQ8N1K5 641 aaPredicted RBP8.5□□□□□ -1.05
HIST1H2BD-201ENST00000289316 SPATA31A6Q5VVP1 1343 aa8.5□□□□□ -1.05
HIST1H2BD-201ENST00000289316 SYNMO15061 1565 aa8.49□□□□□ -1.05
HIST1H2BD-201ENST00000289316 POLR1AO95602 1720 aaPredicted RBP8.49□□□□□ -1.05
HIST1H2BD-201ENST00000289316 ABCA6Q8N139 1617 aa8.48□□□□□ -1.05
HIST1H2BD-201ENST00000289316 CDK13Q14004 1512 aaKnown RBP8.48□□□□□ -1.05
HIST1H2BD-201ENST00000289316 CTTNBP2Q8WZ74 1663 aa8.47□□□□□ -1.05
HIST1H2BD-201ENST00000289316 POTEB2H3BUK9 544 aa8.47□□□□□ -1.05
HIST1H2BD-201ENST00000289316 SLC39A7Q92504 469 aa8.47□□□□□ -1.05
HIST1H2BD-201ENST00000289316 METRNQ9UJH8 293 aa8.47□□□□□ -1.05
HIST1H2BD-201ENST00000289316 ATAD2Q6PL18 1390 aa8.47□□□□□ -1.05
HIST1H2BD-201ENST00000289316 STRCP1A6NGW2 1772 aa8.46□□□□□ -1.05
HIST1H2BD-201ENST00000289316 MAP3K13O43283 966 aa8.46□□□□□ -1.06
HIST1H2BD-201ENST00000289316 RBM6P78332 1123 aaKnown RBP8.46□□□□□ -1.06
HIST1H2BD-201ENST00000289316 LRP6O75581 1613 aa8.46□□□□□ -1.06
HIST1H2BD-201ENST00000289316 NUBP1P53384 320 aa8.45□□□□□ -1.06
HIST1H2BD-201ENST00000289316 CCDC125Q86Z20 511 aa8.45□□□□□ -1.06
HIST1H2BD-201ENST00000289316 RGS12O14924 1447 aa8.45□□□□□ -1.06
HIST1H2BD-201ENST00000289316 ABCC1P33527 1531 aa8.44□□□□□ -1.06
HIST1H2BD-201ENST00000289316 C7P10643 843 aa8.44□□□□□ -1.06
HIST1H2BD-201ENST00000289316 ATN1P54259 1190 aaPredicted RBP8.44□□□□□ -1.06
HIST1H2BD-201ENST00000289316 GGT6Q6P531 493 aa8.44□□□□□ -1.06
HIST1H2BD-201ENST00000289316 OTUD5Q96G74 571 aa8.44□□□□□ -1.06
HIST1H2BD-201ENST00000289316 TNRQ92752 1358 aa8.44□□□□□ -1.06
HIST1H2BD-201ENST00000289316 DEPDC5O75140 1603 aa8.43□□□□□ -1.06
HIST1H2BD-201ENST00000289316 SENP3-EIF4A1A0A087X0R7 540 aa8.43□□□□□ -1.06
HIST1H2BD-201ENST00000289316 QTRT2Q9H974 415 aaKnown RBP8.43□□□□□ -1.06
HIST1H2BD-201ENST00000289316 BMP2KQ9NSY1 1161 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms