RNA–Protein interactions for RNA: ENST00000288839.6

SSX2B-201, Transcript of SSX family member 2B, humanhuman

TSL 3

Gene SSX2B, Length 801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2B-201ENST00000288839 FGD6Q6ZV73 1430 aa10.57□□□□□ -0.72
SSX2B-201ENST00000288839 SPAG9O60271 1321 aaKnown RBP10.57□□□□□ -0.72
SSX2B-201ENST00000288839 PLXNC1O60486 1568 aa10.56□□□□□ -0.72
SSX2B-201ENST00000288839 CEBPAP49715 358 aaPredicted RBP10.56□□□□□ -0.72
SSX2B-201ENST00000288839 HSPA2P54652 639 aa10.55□□□□□ -0.72
SSX2B-201ENST00000288839 PTPN23Q9H3S7 1636 aa10.55□□□□□ -0.72
SSX2B-201ENST00000288839 AGLP35573 1532 aa10.54□□□□□ -0.72
SSX2B-201ENST00000288839 C3P01024 1663 aa10.54□□□□□ -0.72
SSX2B-201ENST00000288839 ADGBQ8N7X0 1667 aa10.54□□□□□ -0.72
SSX2B-201ENST00000288839 CCDC141Q6ZP82 1450 aa10.54□□□□□ -0.72
SSX2B-201ENST00000288839 FAM50AQ14320 339 aaKnown RBP10.53□□□□□ -0.72
SSX2B-201ENST00000288839 TCOF1Q13428 1488 aaKnown RBP10.53□□□□□ -0.72
SSX2B-201ENST00000288839 ARHGEF5Q12774 1597 aa10.52□□□□□ -0.72
SSX2B-201ENST00000288839 PREX1Q8TCU6 1659 aa10.51□□□□□ -0.73
SSX2B-201ENST00000288839 A2MP01023 1474 aa10.51□□□□□ -0.73
SSX2B-201ENST00000288839 RSPH4AQ5TD94 716 aa10.51□□□□□ -0.73
SSX2B-201ENST00000288839 CLTCQ00610 1675 aaKnown RBP10.5□□□□□ -0.73
SSX2B-201ENST00000288839 TSPY4P0CV99 314 aa10.5□□□□□ -0.73
SSX2B-201ENST00000288839 TSPY10P0CW01 314 aa10.5□□□□□ -0.73
SSX2B-201ENST00000288839 RTEL1-TNFRSF6BF6WH68 1400 aa10.5□□□□□ -0.73
SSX2B-201ENST00000288839 ABCC5O15440 1437 aa10.5□□□□□ -0.73
SSX2B-201ENST00000288839 DAPK1P53355 1430 aa10.49□□□□□ -0.73
SSX2B-201ENST00000288839 CHIC2Q9UKJ5 165 aa10.48□□□□□ -0.73
SSX2B-201ENST00000288839 DNMT1P26358 1616 aaKnown RBP10.47□□□□□ -0.73
SSX2B-201ENST00000288839 ITGAEP38570 1179 aa10.46□□□□□ -0.73
SSX2B-201ENST00000288839 POLA2Q14181 598 aa10.46□□□□□ -0.73
SSX2B-201ENST00000288839 MAST1Q9Y2H9 1570 aa10.46□□□□□ -0.74
SSX2B-201ENST00000288839 MROH2AA6NES4 1674 aa10.46□□□□□ -0.74
SSX2B-201ENST00000288839 CROCC2H7BZ55 1655 aa10.46□□□□□ -0.74
SSX2B-201ENST00000288839 MYO3AQ8NEV4 1616 aa10.45□□□□□ -0.74
SSX2B-201ENST00000288839 SHANK2Q9UPX8 1470 aa10.45□□□□□ -0.74
SSX2B-201ENST00000288839 RRP7BPQ9NSQ0 103 aa10.45□□□□□ -0.74
SSX2B-201ENST00000288839 PTPRKQ15262 1439 aa10.44□□□□□ -0.74
SSX2B-201ENST00000288839 UHRF1BP1Q6BDS2 1440 aa10.44□□□□□ -0.74
SSX2B-201ENST00000288839 RRBP1Q9P2E9 1410 aaKnown RBP10.44□□□□□ -0.74
SSX2B-201ENST00000288839 DHX29Q7Z478 1369 aaKnown RBP10.44□□□□□ -0.74
SSX2B-201ENST00000288839 ILDR1Q86SU0 546 aaPredicted RBP10.44□□□□□ -0.74
SSX2B-201ENST00000288839 STRCQ7RTU9 1775 aa10.44□□□□□ -0.74
SSX2B-201ENST00000288839 KIF15Q9NS87 1388 aa10.43□□□□□ -0.74
SSX2B-201ENST00000288839 KIF3BO15066 747 aa10.43□□□□□ -0.74
SSX2B-201ENST00000288839 GGT6Q6P531 493 aa10.43□□□□□ -0.74
SSX2B-201ENST00000288839 CNTLNQ9NXG0 1405 aa10.42□□□□□ -0.74
SSX2B-201ENST00000288839 ANKRD30AQ9BXX3 1397 aa10.42□□□□□ -0.74
SSX2B-201ENST00000288839 MROH1Q8NDA8 1641 aa10.42□□□□□ -0.74
SSX2B-201ENST00000288839 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.41□□□□□ -0.74
SSX2B-201ENST00000288839 ATXN8OSP0DMR3 200 aa10.41□□□□□ -0.74
SSX2B-201ENST00000288839 NCOA1Q15788 1441 aa10.41□□□□□ -0.74
SSX2B-201ENST00000288839 ZMYM3Q14202 1370 aa10.4□□□□□ -0.74
SSX2B-201ENST00000288839 RNF17Q9BXT8 1623 aaKnown RBP10.4□□□□□ -0.74
SSX2B-201ENST00000288839 KDM5DQ9BY66 1539 aa10.4□□□□□ -0.74
SSX2B-201ENST00000288839 ESF1Q9H501 851 aaKnown RBP10.4□□□□□ -0.74
SSX2B-201ENST00000288839 ADGRL2O95490 1459 aa10.4□□□□□ -0.74
SSX2B-201ENST00000288839 ZNF142P52746 1687 aaPredicted RBP10.4□□□□□ -0.74
SSX2B-201ENST00000288839 CEP170BQ9Y4F5 1589 aaPredicted RBP10.39□□□□□ -0.75
SSX2B-201ENST00000288839 DUOX2Q9NRD8 1548 aa10.39□□□□□ -0.75
SSX2B-201ENST00000288839 CEP152O94986 1710 aa10.38□□□□□ -0.75
SSX2B-201ENST00000288839 ABCC3O15438 1527 aa10.38□□□□□ -0.75
SSX2B-201ENST00000288839 CAMSAP1Q5T5Y3 1602 aa10.38□□□□□ -0.75
SSX2B-201ENST00000288839 NPATQ14207 1427 aa10.37□□□□□ -0.75
SSX2B-201ENST00000288839 SETD1BQ9UPS6 1966 aaKnown RBP10.37□□□□□ -0.75
SSX2B-201ENST00000288839 EIF2AK4Q9P2K8 1649 aaKnown RBP10.36□□□□□ -0.75
SSX2B-201ENST00000288839 ERBINQ96RT1 1412 aa10.36□□□□□ -0.75
SSX2B-201ENST00000288839 FBXO31Q5XUX0 539 aaPredicted RBP10.36□□□□□ -0.75
SSX2B-201ENST00000288839 ROCK1Q13464 1354 aa10.36□□□□□ -0.75
SSX2B-201ENST00000288839 PZPP20742 1482 aa10.36□□□□□ -0.75
SSX2B-201ENST00000288839 ANKRD50Q9ULJ7 1429 aa10.35□□□□□ -0.75
SSX2B-201ENST00000288839 PRDM15P57071 1507 aaPredicted RBP10.34□□□□□ -0.75
SSX2B-201ENST00000288839 ZC3H13Q5T200 1668 aaKnown RBP10.34□□□□□ -0.75
SSX2B-201ENST00000288839 WASHC2CQ9Y4E1 1318 aa10.33□□□□□ -0.76
SSX2B-201ENST00000288839 RBM42Q9BTD8 480 aaKnown RBP10.33□□□□□ -0.76
SSX2B-201ENST00000288839 DEPDC5O75140 1603 aa10.33□□□□□ -0.76
SSX2B-201ENST00000288839 FAM135AQ9P2D6 1515 aa10.33□□□□□ -0.76
SSX2B-201ENST00000288839 A2ML1A8K2U0 1454 aa10.32□□□□□ -0.76
SSX2B-201ENST00000288839 TNRQ92752 1358 aa10.32□□□□□ -0.76
SSX2B-201ENST00000288839 NCKAP5LQ9HCH0 1330 aa10.32□□□□□ -0.76
SSX2B-201ENST00000288839 NEURL4Q96JN8 1562 aa10.31□□□□□ -0.76
SSX2B-201ENST00000288839 NAIPQ13075 1403 aa10.31□□□□□ -0.76
SSX2B-201ENST00000288839 SPATA31D1Q6ZQQ2 1576 aa10.31□□□□□ -0.76
SSX2B-201ENST00000288839 ERVK-7P63135 1459 aa10.3□□□□□ -0.76
SSX2B-201ENST00000288839 LTBP4Q8N2S1 1624 aa10.3□□□□□ -0.76
SSX2B-201ENST00000288839 KANK1Q14678 1352 aa10.29□□□□□ -0.76
SSX2B-201ENST00000288839 CFAP65Q6ZU64 1925 aaKnown RBP10.29□□□□□ -0.76
SSX2B-201ENST00000288839 POLR1AO95602 1720 aaPredicted RBP10.29□□□□□ -0.76
SSX2B-201ENST00000288839 PLA2R1Q13018 1463 aa10.29□□□□□ -0.76
SSX2B-201ENST00000288839 HFM1A2PYH4 1435 aa10.28□□□□□ -0.76
SSX2B-201ENST00000288839 PTPRTO14522 1441 aa10.28□□□□□ -0.76
SSX2B-201ENST00000288839 VWDEQ8N2E2 1590 aa10.27□□□□□ -0.76
SSX2B-201ENST00000288839 FBXO41Q8TF61 875 aa10.27□□□□□ -0.77
SSX2B-201ENST00000288839 GCC2Q8IWJ2 1684 aa10.27□□□□□ -0.77
SSX2B-201ENST00000288839 ZNF335Q9H4Z2 1342 aaPredicted RBP10.27□□□□□ -0.77
SSX2B-201ENST00000288839 UNC13BO14795 1591 aa10.26□□□□□ -0.77
SSX2B-201ENST00000288839 UGGT1Q9NYU2 1555 aa10.26□□□□□ -0.77
SSX2B-201ENST00000288839 CERKQ8TCT0 537 aa10.26□□□□□ -0.77
SSX2B-201ENST00000288839 SYNMO15061 1565 aa10.26□□□□□ -0.77
SSX2B-201ENST00000288839 NUP155O75694 1391 aa10.26□□□□□ -0.77
SSX2B-201ENST00000288839 UBR1Q8IWV7 1749 aa10.25□□□□□ -0.77
SSX2B-201ENST00000288839 EFCAB6Q5THR3 1501 aa10.25□□□□□ -0.77
SSX2B-201ENST00000288839 LMTK2Q8IWU2 1503 aa10.25□□□□□ -0.77
SSX2B-201ENST00000288839 NLRP1Q9C000 1473 aa10.24□□□□□ -0.77
SSX2B-201ENST00000288839 TRIM52Q96A61 297 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms