RNA–Protein interactions for RNA: ENST00000287097.5

CD109-201, Transcript of CD109 molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD109, Length 9,130 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-201ENST00000287097 FOXD1Q16676 465 aa9.78□□□□□ -0.84
CD109-201ENST00000287097 PMFBP1Q8TBY8 1022 aa9.78□□□□□ -0.84
CD109-201ENST00000287097 CLUAP1Q96AJ1 413 aa9.78□□□□□ -0.84
CD109-201ENST00000287097 CCDC66A2RUB6 948 aa9.78□□□□□ -0.84
CD109-201ENST00000287097 SKOR2Q2VWA4 1001 aaPredicted RBP9.77□□□□□ -0.84
CD109-201ENST00000287097 HSP90AB3PQ58FF7 597 aa9.77□□□□□ -0.84
CD109-201ENST00000287097 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.77□□□□□ -0.85
CD109-201ENST00000287097 DDX49Q9Y6V7 483 aaKnown RBP9.77□□□□□ -0.85
CD109-201ENST00000287097 SLC4A10Q6U841 1118 aa9.77□□□□□ -0.85
CD109-201ENST00000287097 ANKRD20A12PQ8NF67 263 aa9.76□□□□□ -0.85
CD109-201ENST00000287097 ATP6V1DQ9Y5K8 247 aa9.76□□□□□ -0.85
CD109-201ENST00000287097 SCRIBQ14160 1630 aa9.76□□□□□ -0.85
CD109-201ENST00000287097 PODXL2Q9NZ53 605 aa9.76□□□□□ -0.85
CD109-201ENST00000287097 GSE1Q14687 1217 aa9.76□□□□□ -0.85
CD109-201ENST00000287097 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.75□□□□□ -0.85
CD109-201ENST00000287097 RCAN3Q9UKA8 241 aa9.75□□□□□ -0.85
CD109-201ENST00000287097 MEX3CQ5U5Q3 659 aaKnown RBP9.75□□□□□ -0.85
CD109-201ENST00000287097 CNKSR2Q8WXI2 1034 aa9.75□□□□□ -0.85
CD109-201ENST00000287097 MTERF4Q7Z6M4 381 aaKnown RBP9.75□□□□□ -0.85
CD109-201ENST00000287097 CCDC146Q8IYE0 955 aa9.75□□□□□ -0.85
CD109-201ENST00000287097 PKNOX2Q96KN3 472 aa9.75□□□□□ -0.85
CD109-201ENST00000287097 FAM184AQ8NB25 1140 aa9.74□□□□□ -0.85
CD109-201ENST00000287097 U2AF1L5P0DN76 240 aaPredicted RBP9.74□□□□□ -0.85
CD109-201ENST00000287097 U2AF1Q01081 240 aaKnown RBP eCLIP9.74□□□□□ -0.85
CD109-201ENST00000287097 NEXNQ0ZGT2 675 aa9.74□□□□□ -0.85
CD109-201ENST00000287097 MNS1Q8NEH6 495 aa9.73□□□□□ -0.85
CD109-201ENST00000287097 ODF2Q5BJF6 829 aa9.73□□□□□ -0.85
CD109-201ENST00000287097 TOMM22Q9NS69 142 aa9.73□□□□□ -0.85
CD109-201ENST00000287097 MYO15BQ96JP2 1530 aa9.73□□□□□ -0.85
CD109-201ENST00000287097 ZRSR2Q15696 482 aaKnown RBP9.73□□□□□ -0.85
CD109-201ENST00000287097 CSB-PGBD3P0DP91 1061 aa9.73□□□□□ -0.85
CD109-201ENST00000287097 CHMP4CQ96CF2 233 aa9.73□□□□□ -0.85
CD109-201ENST00000287097 AKAP17AQ02040 695 aaKnown RBP9.72□□□□□ -0.85
CD109-201ENST00000287097 TCEAL9Q9UHQ7 104 aa9.72□□□□□ -0.85
CD109-201ENST00000287097 NAP1L1P55209 391 aaKnown RBP9.72□□□□□ -0.85
CD109-201ENST00000287097 DYDC1Q8WWB3 177 aa9.72□□□□□ -0.85
CD109-201ENST00000287097 HSPA5P11021 654 aaKnown RBP9.72□□□□□ -0.85
CD109-201ENST00000287097 FAM43AQ8N2R8 423 aa9.72□□□□□ -0.85
CD109-201ENST00000287097 HOOK1Q9UJC3 728 aaKnown RBP9.72□□□□□ -0.85
CD109-201ENST00000287097 G3V3G9 751 aa9.72□□□□□ -0.85
CD109-201ENST00000287097 DCAF8Q5TAQ9 597 aa9.72□□□□□ -0.85
CD109-201ENST00000287097 TSPYL1Q9H0U9 437 aa9.72□□□□□ -0.85
CD109-201ENST00000287097 CCDC173Q0VFZ6 552 aa9.72□□□□□ -0.85
CD109-201ENST00000287097 CT47A1Q5JQC4 288 aaPredicted RBP9.72□□□□□ -0.85
CD109-201ENST00000287097 TSHZ2Q9NRE2 1034 aa9.71□□□□□ -0.85
CD109-201ENST00000287097 CCDC47Q96A33 483 aaKnown RBP9.71□□□□□ -0.85
CD109-201ENST00000287097 HDAC5Q9UQL6 1122 aa9.71□□□□□ -0.85
CD109-201ENST00000287097 MYO6Q9UM54 1294 aa9.71□□□□□ -0.85
CD109-201ENST00000287097 LEKR1Q6ZMV7 388 aa9.71□□□□□ -0.86
CD109-201ENST00000287097 ERCC4Q92889 916 aaPredicted RBP9.71□□□□□ -0.86
CD109-201ENST00000287097 SMC4Q9NTJ3 1288 aa9.7□□□□□ -0.86
CD109-201ENST00000287097 DIAPH3Q9NSV4 1193 aa9.7□□□□□ -0.86
CD109-201ENST00000287097 CHMP4AQ9BY43 222 aa9.7□□□□□ -0.86
CD109-201ENST00000287097 RSF1Q96T23 1441 aaPredicted RBP9.7□□□□□ -0.86
CD109-201ENST00000287097 TRHP20396 242 aaPredicted RBP9.7□□□□□ -0.86
CD109-201ENST00000287097 MCTP1Q6DN14 999 aa9.69□□□□□ -0.86
CD109-201ENST00000287097 NUTM2FA1L443 756 aa9.69□□□□□ -0.86
CD109-201ENST00000287097 IFT57Q9NWB7 429 aa9.69□□□□□ -0.86
CD109-201ENST00000287097 GGT6Q6P531 493 aa9.69□□□□□ -0.86
CD109-201ENST00000287097 CCDC180Q9P1Z9 1646 aa9.69□□□□□ -0.86
CD109-201ENST00000287097 HSP90AB2PQ58FF8 381 aa9.69□□□□□ -0.86
CD109-201ENST00000287097 INCENPQ9NQS7 918 aa9.69□□□□□ -0.86
CD109-201ENST00000287097 LTV1Q96GA3 475 aaPredicted RBP9.69□□□□□ -0.86
CD109-201ENST00000287097 CEP162Q5TB80 1403 aa9.69□□□□□ -0.86
CD109-201ENST00000287097 RILPL2Q969X0 211 aa9.68□□□□□ -0.86
CD109-201ENST00000287097 FRAT2O75474 233 aaPredicted RBP9.68□□□□□ -0.86
CD109-201ENST00000287097 NUTM2DQ5VT03 806 aaPredicted RBP9.68□□□□□ -0.86
CD109-201ENST00000287097 CAGE1Q8TC20 777 aa9.67□□□□□ -0.86
CD109-201ENST00000287097 STK31Q9BXU1 1019 aa9.67□□□□□ -0.86
CD109-201ENST00000287097 GOLGA6L7A0A1B0GV03 622 aa9.67□□□□□ -0.86
CD109-201ENST00000287097 NEFHP12036 1026 aa9.67□□□□□ -0.86
CD109-201ENST00000287097 ELL2O00472 640 aaPredicted RBP9.67□□□□□ -0.86
CD109-201ENST00000287097 FBXW7Q969H0 707 aa9.67□□□□□ -0.86
CD109-201ENST00000287097 BCL2L13Q9BXK5 485 aa9.67□□□□□ -0.86
CD109-201ENST00000287097 TRIM29Q14134 588 aa9.66□□□□□ -0.86
CD109-201ENST00000287097 SYNE3Q6ZMZ3 975 aa9.66□□□□□ -0.86
CD109-201ENST00000287097 CCER2I3L3R5 266 aa9.66□□□□□ -0.86
CD109-201ENST00000287097 KIAA0754O94854 1291 aa9.66□□□□□ -0.86
CD109-201ENST00000287097 SPAG9O60271 1321 aaKnown RBP9.66□□□□□ -0.86
CD109-201ENST00000287097 ZFYVE27Q5T4F4 411 aa9.66□□□□□ -0.86
CD109-201ENST00000287097 PLIN1O60240 522 aa9.66□□□□□ -0.86
CD109-201ENST00000287097 RRP7AQ9Y3A4 280 aaKnown RBP9.66□□□□□ -0.86
CD109-201ENST00000287097 RAD21O60216 631 aa9.66□□□□□ -0.86
CD109-201ENST00000287097 SASS6Q6UVJ0 657 aa9.66□□□□□ -0.86
CD109-201ENST00000287097 TAF3Q5VWG9 929 aa9.66□□□□□ -0.86
CD109-201ENST00000287097 SKIDA1Q1XH10 827 aa9.65□□□□□ -0.86
CD109-201ENST00000287097 CPLX2Q6PUV4 134 aaKnown RBP9.65□□□□□ -0.86
CD109-201ENST00000287097 HDGFL2Q7Z4V5 671 aaPredicted RBP9.65□□□□□ -0.86
CD109-201ENST00000287097 AXDND1Q5T1B0 1012 aaPredicted RBP9.65□□□□□ -0.87
CD109-201ENST00000287097 NGEFQ8N5V2 710 aa9.64□□□□□ -0.87
CD109-201ENST00000287097 KTN1Q86UP2 1357 aaKnown RBP9.64□□□□□ -0.87
CD109-201ENST00000287097 USP8P40818 1118 aa9.64□□□□□ -0.87
CD109-201ENST00000287097 EPS15P42566 896 aa9.64□□□□□ -0.87
CD109-201ENST00000287097 R3HCC1Q9Y3T6 440 aaKnown RBP9.64□□□□□ -0.87
CD109-201ENST00000287097 BICD2Q8TD16 824 aa9.64□□□□□ -0.87
CD109-201ENST00000287097 DEF6Q9H4E7 631 aa9.64□□□□□ -0.87
CD109-201ENST00000287097 CT47B1P0C2W7 299 aaPredicted RBP9.64□□□□□ -0.87
CD109-201ENST00000287097 CLASRPQ8N2M8 674 aaKnown RBP9.63□□□□□ -0.87
CD109-201ENST00000287097 BAZ1BQ9UIG0 1483 aaKnown RBP9.63□□□□□ -0.87
CD109-201ENST00000287097 SEPT7Q16181 437 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms