RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 ABCC5O15440 1437 aa13.77□□□□□ -0.2
PDCD4-201ENST00000280154 ABCA6Q8N139 1617 aa13.77□□□□□ -0.2
PDCD4-201ENST00000280154 TMEM132AQ24JP5 1023 aa13.76□□□□□ -0.21
PDCD4-201ENST00000280154 DIP2CQ9Y2E4 1556 aa13.76□□□□□ -0.21
PDCD4-201ENST00000280154 ZNF518AQ6AHZ1 1483 aa13.76□□□□□ -0.21
PDCD4-201ENST00000280154 AGLP35573 1532 aa13.76□□□□□ -0.21
PDCD4-201ENST00000280154 SIGLEC1Q9BZZ2 1709 aa13.76□□□□□ -0.21
PDCD4-201ENST00000280154 CYB5RLQ6IPT4 315 aa13.75□□□□□ -0.21
PDCD4-201ENST00000280154 MROH1Q8NDA8 1641 aa13.75□□□□□ -0.21
PDCD4-201ENST00000280154 BRD2P25440 801 aaKnown RBP13.75□□□□□ -0.21
PDCD4-201ENST00000280154 PTPRKQ15262 1439 aa13.75□□□□□ -0.21
PDCD4-201ENST00000280154 FGD1P98174 961 aa13.74□□□□□ -0.21
PDCD4-201ENST00000280154 ATP7AQ04656 1500 aa13.74□□□□□ -0.21
PDCD4-201ENST00000280154 IGSF3O75054 1194 aa13.73□□□□□ -0.21
PDCD4-201ENST00000280154 ZC3H13Q5T200 1668 aaKnown RBP13.73□□□□□ -0.21
PDCD4-201ENST00000280154 HFM1A2PYH4 1435 aa13.72□□□□□ -0.21
PDCD4-201ENST00000280154 ANP32EQ9BTT0 268 aa13.72□□□□□ -0.21
PDCD4-201ENST00000280154 TSPOAP1O95153 1857 aa13.71□□□□□ -0.21
PDCD4-201ENST00000280154 RSPH4AQ5TD94 716 aa13.71□□□□□ -0.21
PDCD4-201ENST00000280154 ADGRL1O94910 1474 aa13.71□□□□□ -0.21
PDCD4-201ENST00000280154 PRDM15P57071 1507 aaPredicted RBP13.71□□□□□ -0.22
PDCD4-201ENST00000280154 IQGAP3Q86VI3 1631 aa13.7□□□□□ -0.22
PDCD4-201ENST00000280154 DUOX2Q9NRD8 1548 aa13.7□□□□□ -0.22
PDCD4-201ENST00000280154 MYT1LQ9UL68 1186 aa13.7□□□□□ -0.22
PDCD4-201ENST00000280154 PPARGC1BQ86YN6 1023 aaKnown RBP13.7□□□□□ -0.22
PDCD4-201ENST00000280154 LMTK2Q8IWU2 1503 aa13.69□□□□□ -0.22
PDCD4-201ENST00000280154 MROH2AA6NES4 1674 aa13.68□□□□□ -0.22
PDCD4-201ENST00000280154 ERBINQ96RT1 1412 aa13.68□□□□□ -0.22
PDCD4-201ENST00000280154 COL17A1Q9UMD9 1497 aaPredicted RBP13.68□□□□□ -0.22
PDCD4-201ENST00000280154 NPM1P06748 294 aaKnown RBP eCLIP13.68□□□□□ -0.22
PDCD4-201ENST00000280154 TRAPPC8Q9Y2L5 1435 aa13.67□□□□□ -0.22
PDCD4-201ENST00000280154 NCOA1Q15788 1441 aa13.67□□□□□ -0.22
PDCD4-201ENST00000280154 DENND4BO75064 1496 aaPredicted RBP13.67□□□□□ -0.22
PDCD4-201ENST00000280154 DEKP35659 375 aaKnown RBP13.66□□□□□ -0.22
PDCD4-201ENST00000280154 KDM6BO15054 1643 aa13.66□□□□□ -0.22
PDCD4-201ENST00000280154 NEURL4Q96JN8 1562 aa13.65□□□□□ -0.22
PDCD4-201ENST00000280154 NAIPQ13075 1403 aa13.65□□□□□ -0.22
PDCD4-201ENST00000280154 C9orf84Q5VXU9 1444 aa13.64□□□□□ -0.23
PDCD4-201ENST00000280154 ACIN1Q9UKV3 1341 aaKnown RBP13.63□□□□□ -0.23
PDCD4-201ENST00000280154 NAP1L5Q96NT1 182 aaPredicted RBP13.63□□□□□ -0.23
PDCD4-201ENST00000280154 EFCAB2Q5VUJ9 269 aa13.62□□□□□ -0.23
PDCD4-201ENST00000280154 SCAPERQ9BY12 1400 aa13.6□□□□□ -0.23
PDCD4-201ENST00000280154 TET3O43151 1660 aa13.6□□□□□ -0.23
PDCD4-201ENST00000280154 KDM5AP29375 1690 aaKnown RBP13.59□□□□□ -0.23
PDCD4-201ENST00000280154 ADAMTSL3P82987 1691 aa13.58□□□□□ -0.24
PDCD4-201ENST00000280154 ZNF526Q8TF50 670 aaPredicted RBP13.57□□□□□ -0.24
PDCD4-201ENST00000280154 CFDP1Q9UEE9 299 aaPredicted RBP13.57□□□□□ -0.24
PDCD4-201ENST00000280154 ATP10AO60312 1499 aa13.56□□□□□ -0.24
PDCD4-201ENST00000280154 PIK3C2BO00750 1634 aa13.55□□□□□ -0.24
PDCD4-201ENST00000280154 ZNF644Q9H582 1327 aaPredicted RBP13.54□□□□□ -0.24
PDCD4-201ENST00000280154 PRDM10Q9NQV6 1147 aa13.54□□□□□ -0.24
PDCD4-201ENST00000280154 FAM69CQ0P6D2 419 aa13.54□□□□□ -0.24
PDCD4-201ENST00000280154 CAMSAP1Q5T5Y3 1602 aa13.54□□□□□ -0.24
PDCD4-201ENST00000280154 A2MP01023 1474 aa13.53□□□□□ -0.24
PDCD4-201ENST00000280154 DHX29Q7Z478 1369 aaKnown RBP13.53□□□□□ -0.24
PDCD4-201ENST00000280154 E9PCH4 1651 aa13.52□□□□□ -0.25
PDCD4-201ENST00000280154 PZPP20742 1482 aa13.52□□□□□ -0.25
PDCD4-201ENST00000280154 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.52□□□□□ -0.25
PDCD4-201ENST00000280154 EFCAB6Q5THR3 1501 aa13.51□□□□□ -0.25
PDCD4-201ENST00000280154 ANKRD30AQ9BXX3 1397 aa13.51□□□□□ -0.25
PDCD4-201ENST00000280154 SETD5Q9C0A6 1442 aa13.51□□□□□ -0.25
PDCD4-201ENST00000280154 ARHGAP31Q2M1Z3 1444 aa13.5□□□□□ -0.25
PDCD4-201ENST00000280154 SLC4A1APQ9BWU0 796 aaKnown RBP13.5□□□□□ -0.25
PDCD4-201ENST00000280154 RBM10P98175 930 aaKnown RBP13.5□□□□□ -0.25
PDCD4-201ENST00000280154 CEP152O94986 1710 aa13.5□□□□□ -0.25
PDCD4-201ENST00000280154 RPRD2Q5VT52 1461 aaKnown RBP13.49□□□□□ -0.25
PDCD4-201ENST00000280154 SPHKAPQ2M3C7 1700 aa13.48□□□□□ -0.25
PDCD4-201ENST00000280154 ABCC3O15438 1527 aa13.48□□□□□ -0.25
PDCD4-201ENST00000280154 FBXO3Q9UK99 471 aa13.48□□□□□ -0.25
PDCD4-201ENST00000280154 YEATS2Q9ULM3 1422 aa13.48□□□□□ -0.25
PDCD4-201ENST00000280154 IFT172Q9UG01 1749 aa13.47□□□□□ -0.25
PDCD4-201ENST00000280154 KDM2AQ9Y2K7 1162 aa13.46□□□□□ -0.25
PDCD4-201ENST00000280154 ANKRD50Q9ULJ7 1429 aa13.46□□□□□ -0.25
PDCD4-201ENST00000280154 ARID3CA6NKF2 412 aa13.46□□□□□ -0.26
PDCD4-201ENST00000280154 KCNH8Q96L42 1107 aa13.46□□□□□ -0.26
PDCD4-201ENST00000280154 ATP1B4Q9UN42 357 aaPredicted RBP13.46□□□□□ -0.26
PDCD4-201ENST00000280154 KIF15Q9NS87 1388 aa13.46□□□□□ -0.26
PDCD4-201ENST00000280154 ZNF142P52746 1687 aaPredicted RBP13.45□□□□□ -0.26
PDCD4-201ENST00000280154 PHF23Q9BUL5 403 aaPredicted RBP13.45□□□□□ -0.26
PDCD4-201ENST00000280154 SPATA31D1Q6ZQQ2 1576 aa13.45□□□□□ -0.26
PDCD4-201ENST00000280154 FER1L4A9Z1Z3 1794 aa13.45□□□□□ -0.26
PDCD4-201ENST00000280154 PREX1Q8TCU6 1659 aa13.45□□□□□ -0.26
PDCD4-201ENST00000280154 PTPRTO14522 1441 aa13.44□□□□□ -0.26
PDCD4-201ENST00000280154 BRPF3Q9ULD4 1205 aa13.44□□□□□ -0.26
PDCD4-201ENST00000280154 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.44□□□□□ -0.26
PDCD4-201ENST00000280154 HNRNPUL2Q1KMD3 747 aaKnown RBP13.44□□□□□ -0.26
PDCD4-201ENST00000280154 TRPM2O94759 1503 aa13.43□□□□□ -0.26
PDCD4-201ENST00000280154 ZNF428Q96B54 188 aa13.43□□□□□ -0.26
PDCD4-201ENST00000280154 AAMPQ13685 434 aa13.43□□□□□ -0.26
PDCD4-201ENST00000280154 C3P01024 1663 aa13.42□□□□□ -0.26
PDCD4-201ENST00000280154 HNRNPMP52272 730 aaKnown RBP eCLIP13.42□□□□□ -0.26
PDCD4-201ENST00000280154 CLTCQ00610 1675 aaKnown RBP13.41□□□□□ -0.26
PDCD4-201ENST00000280154 RAB3GAP2Q9H2M9 1393 aa13.41□□□□□ -0.26
PDCD4-201ENST00000280154 CLSPNQ9HAW4 1339 aa13.41□□□□□ -0.26
PDCD4-201ENST00000280154 SPAG9O60271 1321 aaKnown RBP13.4□□□□□ -0.26
PDCD4-201ENST00000280154 CNKSR2Q8WXI2 1034 aa13.4□□□□□ -0.26
PDCD4-201ENST00000280154 SYNMO15061 1565 aa13.39□□□□□ -0.27
PDCD4-201ENST00000280154 VSIG10Q8N0Z9 540 aa13.39□□□□□ -0.27
PDCD4-201ENST00000280154 NOS1P29475 1434 aa13.37□□□□□ -0.27
PDCD4-201ENST00000280154 AFAP1Q8N556 730 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms