RNA–Protein interactions for RNA: ENST00000278616.8

ATM-201, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ATM, Length 13,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-201ENST00000278616 ARGLU1Q9NWB6 273 aaPredicted RBP9.2□□□□□ -0.94
ATM-201ENST00000278616 CHMP3Q9Y3E7 222 aa9.2□□□□□ -0.94
ATM-201ENST00000278616 KANK1Q14678 1352 aa9.2□□□□□ -0.94
ATM-201ENST00000278616 HOOK1Q9UJC3 728 aaKnown RBP9.2□□□□□ -0.94
ATM-201ENST00000278616 BCL11BQ9C0K0 894 aaPredicted RBP9.19□□□□□ -0.94
ATM-201ENST00000278616 EEA1Q15075 1411 aa9.19□□□□□ -0.94
ATM-201ENST00000278616 MLECQ14165 292 aa9.19□□□□□ -0.94
ATM-201ENST00000278616 PLEKHD1A6NEE1 506 aa9.19□□□□□ -0.94
ATM-201ENST00000278616 MARCH6O60337 910 aa9.19□□□□□ -0.94
ATM-201ENST00000278616 DCTN1Q14203 1278 aa9.19□□□□□ -0.94
ATM-201ENST00000278616 STK26Q9P289 416 aa9.19□□□□□ -0.94
ATM-201ENST00000278616 H0YHG0 523 aa9.19□□□□□ -0.94
ATM-201ENST00000278616 SLC4A3P48751 1232 aa9.19□□□□□ -0.94
ATM-201ENST00000278616 ZNF330Q9Y3S2 320 aaPredicted RBP9.19□□□□□ -0.94
ATM-201ENST00000278616 SMC4Q9NTJ3 1288 aa9.18□□□□□ -0.94
ATM-201ENST00000278616 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.18□□□□□ -0.94
ATM-201ENST00000278616 DCAF11Q8TEB1 546 aa9.18□□□□□ -0.94
ATM-201ENST00000278616 CCDC66A2RUB6 948 aa9.18□□□□□ -0.94
ATM-201ENST00000278616 FAM184AQ8NB25 1140 aa9.17□□□□□ -0.94
ATM-201ENST00000278616 BAZ1BQ9UIG0 1483 aaKnown RBP9.17□□□□□ -0.94
ATM-201ENST00000278616 FOXD4L6Q3SYB3 417 aaPredicted RBP9.17□□□□□ -0.94
ATM-201ENST00000278616 FOXD4L3Q6VB84 417 aaPredicted RBP9.17□□□□□ -0.94
ATM-201ENST00000278616 PCMTD1Q96MG8 357 aaPredicted RBP9.17□□□□□ -0.94
ATM-201ENST00000278616 CCDC9Q9Y3X0 531 aaKnown RBP9.17□□□□□ -0.94
ATM-201ENST00000278616 TCEAL9Q9UHQ7 104 aa9.17□□□□□ -0.94
ATM-201ENST00000278616 STK31Q9BXU1 1019 aa9.16□□□□□ -0.94
ATM-201ENST00000278616 FAM43AQ8N2R8 423 aa9.15□□□□□ -0.94
ATM-201ENST00000278616 TSHZ2Q9NRE2 1034 aa9.15□□□□□ -0.94
ATM-201ENST00000278616 PHLDB1Q86UU1 1377 aa9.15□□□□□ -0.94
ATM-201ENST00000278616 CCDC146Q8IYE0 955 aa9.15□□□□□ -0.94
ATM-201ENST00000278616 CEP164Q9UPV0 1460 aa9.15□□□□□ -0.94
ATM-201ENST00000278616 AKAP17AQ02040 695 aaKnown RBP9.15□□□□□ -0.95
ATM-201ENST00000278616 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.15□□□□□ -0.95
ATM-201ENST00000278616 KRI1Q8N9T8 703 aaKnown RBP9.15□□□□□ -0.95
ATM-201ENST00000278616 EIF3AQ14152 1382 aaKnown RBP9.14□□□□□ -0.95
ATM-201ENST00000278616 RALBP1Q15311 655 aa9.14□□□□□ -0.95
ATM-201ENST00000278616 MYO6Q9UM54 1294 aa9.14□□□□□ -0.95
ATM-201ENST00000278616 DIAPH3Q9NSV4 1193 aa9.14□□□□□ -0.95
ATM-201ENST00000278616 ROCK2O75116 1388 aaKnown RBP9.14□□□□□ -0.95
ATM-201ENST00000278616 G3V3G9 751 aa9.14□□□□□ -0.95
ATM-201ENST00000278616 DCAF8Q5TAQ9 597 aa9.14□□□□□ -0.95
ATM-201ENST00000278616 CCDC173Q0VFZ6 552 aa9.14□□□□□ -0.95
ATM-201ENST00000278616 WWC1Q8IX03 1113 aa9.14□□□□□ -0.95
ATM-201ENST00000278616 HDGFP51858 240 aaKnown RBP9.13□□□□□ -0.95
ATM-201ENST00000278616 FAM161AQ3B820 660 aa9.13□□□□□ -0.95
ATM-201ENST00000278616 HDGFL2Q7Z4V5 671 aaPredicted RBP9.13□□□□□ -0.95
ATM-201ENST00000278616 ODF2Q5BJF6 829 aa9.13□□□□□ -0.95
ATM-201ENST00000278616 MCTP1Q6DN14 999 aa9.13□□□□□ -0.95
ATM-201ENST00000278616 LRRFIP1Q32MZ4 808 aaKnown RBP9.13□□□□□ -0.95
ATM-201ENST00000278616 IFT57Q9NWB7 429 aa9.13□□□□□ -0.95
ATM-201ENST00000278616 HSPA5P11021 654 aaKnown RBP9.13□□□□□ -0.95
ATM-201ENST00000278616 U2AF1L5P0DN76 240 aaPredicted RBP9.13□□□□□ -0.95
ATM-201ENST00000278616 U2AF1Q01081 240 aaKnown RBP eCLIP9.13□□□□□ -0.955e-6■□□□□ 11.2
ATM-201ENST00000278616 FHAD1B1AJZ9 1412 aa9.13□□□□□ -0.95
ATM-201ENST00000278616 CENPQQ7L2Z9 268 aaPredicted RBP9.12□□□□□ -0.95
ATM-201ENST00000278616 TOMM22Q9NS69 142 aa9.12□□□□□ -0.95
ATM-201ENST00000278616 CCNB3Q8WWL7 1395 aa9.12□□□□□ -0.95
ATM-201ENST00000278616 TRIM29Q14134 588 aa9.12□□□□□ -0.95
ATM-201ENST00000278616 MNS1Q8NEH6 495 aa9.12□□□□□ -0.95
ATM-201ENST00000278616 CENPJQ9HC77 1338 aaPredicted RBP9.12□□□□□ -0.95
ATM-201ENST00000278616 SLC4A10Q6U841 1118 aa9.12□□□□□ -0.95
ATM-201ENST00000278616 CCDC47Q96A33 483 aaKnown RBP9.12□□□□□ -0.95
ATM-201ENST00000278616 NAT10Q9H0A0 1025 aaKnown RBP9.12□□□□□ -0.95
ATM-201ENST00000278616 PAK3O75914 559 aaPredicted RBP9.11□□□□□ -0.95
ATM-201ENST00000278616 CT47A1Q5JQC4 288 aaPredicted RBP9.11□□□□□ -0.95
ATM-201ENST00000278616 ARHGAP35Q9NRY4 1499 aa9.11□□□□□ -0.95
ATM-201ENST00000278616 ZRSR2Q15696 482 aaKnown RBP9.11□□□□□ -0.95
ATM-201ENST00000278616 LEKR1Q6ZMV7 388 aa9.11□□□□□ -0.95
ATM-201ENST00000278616 CLUAP1Q96AJ1 413 aa9.11□□□□□ -0.95
ATM-201ENST00000278616 NAP1L1P55209 391 aaKnown RBP9.11□□□□□ -0.95
ATM-201ENST00000278616 SASS6Q6UVJ0 657 aa9.11□□□□□ -0.95
ATM-201ENST00000278616 REC8O95072 547 aa9.1□□□□□ -0.95
ATM-201ENST00000278616 ERCC4Q92889 916 aaPredicted RBP9.1□□□□□ -0.95
ATM-201ENST00000278616 PKNOX2Q96KN3 472 aa9.1□□□□□ -0.95
ATM-201ENST00000278616 FRAT2O75474 233 aaPredicted RBP9.1□□□□□ -0.95
ATM-201ENST00000278616 RILPL2Q969X0 211 aa9.1□□□□□ -0.95
ATM-201ENST00000278616 PLCD4Q9BRC7 762 aa9.1□□□□□ -0.95
ATM-201ENST00000278616 SYNE3Q6ZMZ3 975 aa9.1□□□□□ -0.95
ATM-201ENST00000278616 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.1□□□□□ -0.956e-7■■■■■ 106.6
ATM-201ENST00000278616 CPLX2Q6PUV4 134 aaKnown RBP9.09□□□□□ -0.95
ATM-201ENST00000278616 CAGE1Q8TC20 777 aa9.09□□□□□ -0.95
ATM-201ENST00000278616 NUTM2DQ5VT03 806 aaPredicted RBP9.09□□□□□ -0.95
ATM-201ENST00000278616 CGNL1Q0VF96 1302 aa9.09□□□□□ -0.95
ATM-201ENST00000278616 EIF4G1Q04637 1599 aaKnown RBP9.09□□□□□ -0.95
ATM-201ENST00000278616 HSP90AB3PQ58FF7 597 aa9.09□□□□□ -0.95
ATM-201ENST00000278616 NEXNQ0ZGT2 675 aa9.08□□□□□ -0.96
ATM-201ENST00000278616 PLIN1O60240 522 aa9.08□□□□□ -0.96
ATM-201ENST00000278616 BICD2Q8TD16 824 aa9.08□□□□□ -0.96
ATM-201ENST00000278616 HSP90AB2PQ58FF8 381 aa9.08□□□□□ -0.96
ATM-201ENST00000278616 EPS15P42566 896 aa9.08□□□□□ -0.96
ATM-201ENST00000278616 CNKSR2Q8WXI2 1034 aa9.08□□□□□ -0.96
ATM-201ENST00000278616 AMOTL1Q8IY63 956 aa9.08□□□□□ -0.96
ATM-201ENST00000278616 GOLGA6L7A0A1B0GV03 622 aa9.08□□□□□ -0.96
ATM-201ENST00000278616 CCDC39Q9UFE4 941 aa9.08□□□□□ -0.96
ATM-201ENST00000278616 LMOD3Q0VAK6 560 aa9.08□□□□□ -0.96
ATM-201ENST00000278616 SETD5Q9C0A6 1442 aa9.07□□□□□ -0.96
ATM-201ENST00000278616 STK11IPQ8N1F8 1099 aa9.07□□□□□ -0.96
ATM-201ENST00000278616 DYDC1Q8WWB3 177 aa9.07□□□□□ -0.96
ATM-201ENST00000278616 KIF27Q86VH2 1401 aa9.07□□□□□ -0.96
ATM-201ENST00000278616 ANKRD45Q5TZF3 282 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms