RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 MLH3Q9UHC1 1453 aa28.1■■■□□ 2.09
C11orf49-201ENST00000278460 TSPOAP1O95153 1857 aa28.1■■■□□ 2.09
C11orf49-201ENST00000278460 FAM69CQ0P6D2 419 aa28.06■■■□□ 2.08
C11orf49-201ENST00000278460 DHX29Q7Z478 1369 aaKnown RBP28.03■■■□□ 2.08
C11orf49-201ENST00000278460 MYT1LQ9UL68 1186 aa28.01■■■□□ 2.07
C11orf49-201ENST00000278460 ABCA6Q8N139 1617 aa28■■■□□ 2.07
C11orf49-201ENST00000278460 TEX14Q8IWB6 1497 aa28■■■□□ 2.07
C11orf49-201ENST00000278460 BCORL1Q5H9F3 1711 aa27.99■■■□□ 2.07
C11orf49-201ENST00000278460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.98■■■□□ 2.07
C11orf49-201ENST00000278460 VWDEQ8N2E2 1590 aa27.98■■■□□ 2.07
C11orf49-201ENST00000278460 A2MP01023 1474 aa27.98■■■□□ 2.07
C11orf49-201ENST00000278460 PRDM15P57071 1507 aaPredicted RBP27.97■■■□□ 2.07
C11orf49-201ENST00000278460 FRMPD1Q5SYB0 1578 aa27.97■■■□□ 2.07
C11orf49-201ENST00000278460 MROH1Q8NDA8 1641 aa27.96■■■□□ 2.07
C11orf49-201ENST00000278460 RNF17Q9BXT8 1623 aaKnown RBP27.96■■■□□ 2.07
C11orf49-201ENST00000278460 TET3O43151 1660 aa27.96■■■□□ 2.07
C11orf49-201ENST00000278460 E9PCH4 1651 aa27.93■■■□□ 2.06
C11orf49-201ENST00000278460 ZMYM4Q5VZL5 1548 aa27.93■■■□□ 2.06
C11orf49-201ENST00000278460 L3MBTL2Q969R5 705 aa27.92■■■□□ 2.06
C11orf49-201ENST00000278460 DIP2CQ9Y2E4 1556 aa27.92■■■□□ 2.06
C11orf49-201ENST00000278460 RAPGEF3O95398 923 aa27.9■■■□□ 2.06
C11orf49-201ENST00000278460 ATP10AO60312 1499 aa27.9■■■□□ 2.06
C11orf49-201ENST00000278460 KANK1Q14678 1352 aa27.89■■■□□ 2.06
C11orf49-201ENST00000278460 KIF3BO15066 747 aa27.89■■■□□ 2.05
C11orf49-201ENST00000278460 DIEXFQ68CQ4 756 aaKnown RBP27.87■■■□□ 2.05
C11orf49-201ENST00000278460 SPHKAPQ2M3C7 1700 aa27.87■■■□□ 2.05
C11orf49-201ENST00000278460 PLA2R1Q13018 1463 aa27.86■■■□□ 2.05
C11orf49-201ENST00000278460 CEP152O94986 1710 aa27.84■■■□□ 2.05
C11orf49-201ENST00000278460 CCDC144AA2RUR9 1427 aa27.82■■■□□ 2.04
C11orf49-201ENST00000278460 LMTK2Q8IWU2 1503 aa27.82■■■□□ 2.04
C11orf49-201ENST00000278460 TRPM2O94759 1503 aa27.77■■■□□ 2.04
C11orf49-201ENST00000278460 EFCAB6Q5THR3 1501 aa27.77■■■□□ 2.04
C11orf49-201ENST00000278460 YEATS2Q9ULM3 1422 aa27.77■■■□□ 2.04
C11orf49-201ENST00000278460 PTPRTO14522 1441 aa27.75■■■□□ 2.03
C11orf49-201ENST00000278460 REREQ9P2R6 1566 aa27.74■■■□□ 2.03
C11orf49-201ENST00000278460 UHRF1BP1Q6BDS2 1440 aa27.72■■■□□ 2.03
C11orf49-201ENST00000278460 ZC3H13Q5T200 1668 aaKnown RBP27.71■■■□□ 2.03
C11orf49-201ENST00000278460 NBPF8Q3BBV2 869 aa27.7■■■□□ 2.03
C11orf49-201ENST00000278460 CLTCL1P53675 1640 aa27.68■■■□□ 2.02
C11orf49-201ENST00000278460 ABCC3O15438 1527 aa27.68■■■□□ 2.02
C11orf49-201ENST00000278460 CAMSAP1Q5T5Y3 1602 aa27.67■■■□□ 2.02
C11orf49-201ENST00000278460 CFAP65Q6ZU64 1925 aaKnown RBP27.65■■■□□ 2.02
C11orf49-201ENST00000278460 COL17A1Q9UMD9 1497 aaPredicted RBP27.64■■■□□ 2.02
C11orf49-201ENST00000278460 KIF1BO60333 1816 aa27.64■■■□□ 2.01
C11orf49-201ENST00000278460 NEURL4Q96JN8 1562 aa27.64■■■□□ 2.01
C11orf49-201ENST00000278460 AGLP35573 1532 aa27.63■■■□□ 2.01
C11orf49-201ENST00000278460 ARHGEF40Q8TER5 1519 aa27.63■■■□□ 2.01
C11orf49-201ENST00000278460 GGT6Q6P531 493 aa27.63■■■□□ 2.01
C11orf49-201ENST00000278460 RALGAPBQ86X10 1494 aa27.62■■■□□ 2.01
C11orf49-201ENST00000278460 SPATA31E1Q6ZUB1 1445 aa27.61■■■□□ 2.01
C11orf49-201ENST00000278460 EIF4G2P78344 907 aaKnown RBP eCLIP27.58■■■□□ 2.01
C11orf49-201ENST00000278460 DCAF11Q8TEB1 546 aa27.58■■■□□ 2.01
C11orf49-201ENST00000278460 TRPM1Q7Z4N2 1603 aa27.57■■■□□ 2
C11orf49-201ENST00000278460 NPATQ14207 1427 aa27.57■■■□□ 2
C11orf49-201ENST00000278460 POLR1AO95602 1720 aaPredicted RBP27.56■■■□□ 2
C11orf49-201ENST00000278460 WASHC2CQ9Y4E1 1318 aa27.56■■■□□ 2
C11orf49-201ENST00000278460 HSPA5P11021 654 aaKnown RBP27.55■■■□□ 2
C11orf49-201ENST00000278460 SIGLEC1Q9BZZ2 1709 aa27.54■■■□□ 2
C11orf49-201ENST00000278460 PRAG1Q86YV5 1406 aa27.54■■■□□ 2
C11orf49-201ENST00000278460 ARHGAP31Q2M1Z3 1444 aa27.53■■■□□ 2
C11orf49-201ENST00000278460 HIRIP3Q9BW71 556 aaPredicted RBP27.53■■■□□ 2
C11orf49-201ENST00000278460 RGL3Q3MIN7 710 aa27.52■■■□□ 2
C11orf49-201ENST00000278460 ZNF326Q5BKZ1 582 aaKnown RBP27.52■■■□□ 2
C11orf49-201ENST00000278460 KDM2AQ9Y2K7 1162 aa27.52■■■□□ 2
C11orf49-201ENST00000278460 CNTLNQ9NXG0 1405 aa27.51■■□□□ 1.99
C11orf49-201ENST00000278460 UGGT1Q9NYU2 1555 aa27.5■■□□□ 1.99
C11orf49-201ENST00000278460 IFT172Q9UG01 1749 aa27.49■■□□□ 1.99
C11orf49-201ENST00000278460 LAMC1P11047 1609 aa27.49■■□□□ 1.99
C11orf49-201ENST00000278460 MROH2AA6NES4 1674 aa27.49■■□□□ 1.99
C11orf49-201ENST00000278460 DNAJC5Q9H3Z4 198 aa27.49■■□□□ 1.99
C11orf49-201ENST00000278460 NOS1P29475 1434 aa27.47■■□□□ 1.99
C11orf49-201ENST00000278460 PIK3C2BO00750 1634 aa27.46■■□□□ 1.99
C11orf49-201ENST00000278460 MADDQ8WXG6 1647 aa27.46■■□□□ 1.99
C11orf49-201ENST00000278460 STAC3Q96MF2 364 aa27.46■■□□□ 1.99
C11orf49-201ENST00000278460 PREX1Q8TCU6 1659 aa27.46■■□□□ 1.99
C11orf49-201ENST00000278460 PPP6R1Q9UPN7 881 aa27.45■■□□□ 1.99
C11orf49-201ENST00000278460 ADGRB3O60242 1522 aa27.43■■□□□ 1.98
C11orf49-201ENST00000278460 SYNMO15061 1565 aa27.43■■□□□ 1.98
C11orf49-201ENST00000278460 CLTCQ00610 1675 aaKnown RBP27.43■■□□□ 1.98
C11orf49-201ENST00000278460 USP47Q96K76 1375 aa27.42■■□□□ 1.98
C11orf49-201ENST00000278460 KIAA1210Q9ULL0 1709 aa27.4■■□□□ 1.98
C11orf49-201ENST00000278460 MIER1Q8N108 512 aa27.4■■□□□ 1.98
C11orf49-201ENST00000278460 GPRASP1Q5JY77 1395 aa27.39■■□□□ 1.98
C11orf49-201ENST00000278460 DDX10Q13206 875 aaKnown RBP27.38■■□□□ 1.97
C11orf49-201ENST00000278460 PPLO60437 1756 aa27.38■■□□□ 1.97
C11orf49-201ENST00000278460 ROCK2O75116 1388 aaKnown RBP27.38■■□□□ 1.97
C11orf49-201ENST00000278460 CARD11Q9BXL7 1154 aa27.38■■□□□ 1.97
C11orf49-201ENST00000278460 MYOM2P54296 1465 aa27.37■■□□□ 1.97
C11orf49-201ENST00000278460 TRHP20396 242 aaPredicted RBP27.36■■□□□ 1.97
C11orf49-201ENST00000278460 WASHC2AQ641Q2 1341 aa27.33■■□□□ 1.97
C11orf49-201ENST00000278460 CCDC7Q96M83 1385 aa27.31■■□□□ 1.96
C11orf49-201ENST00000278460 MYO5BQ9ULV0 1848 aa27.3■■□□□ 1.96
C11orf49-201ENST00000278460 ERVK-7P63135 1459 aa27.29■■□□□ 1.96
C11orf49-201ENST00000278460 IQGAP1P46940 1657 aa27.29■■□□□ 1.96
C11orf49-201ENST00000278460 NRXN1Q9ULB1 1477 aa27.27■■□□□ 1.96
C11orf49-201ENST00000278460 NBPF1Q3BBV0 1214 aa27.27■■□□□ 1.96
C11orf49-201ENST00000278460 C11orf95C9JLR9 678 aaPredicted RBP27.26■■□□□ 1.95
C11orf49-201ENST00000278460 SLC52A1Q9NWF4 448 aa27.26■■□□□ 1.95
C11orf49-201ENST00000278460 SPATA31D1Q6ZQQ2 1576 aa27.25■■□□□ 1.95
C11orf49-201ENST00000278460 TMEM131LA2VDJ0 1609 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms