RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 FAM13BQ9NYF5 915 aa16.81■□□□□ 0.28
NOTCH1-201ENST00000277541 MPHOSPH9Q99550 1183 aa16.81■□□□□ 0.28
NOTCH1-201ENST00000277541 TSR1Q2NL82 804 aaKnown RBP16.8■□□□□ 0.28
NOTCH1-201ENST00000277541 NOM1Q5C9Z4 860 aaKnown RBP16.8■□□□□ 0.28
NOTCH1-201ENST00000277541 NOL8Q76FK4 1167 aaKnown RBP16.79■□□□□ 0.28
NOTCH1-201ENST00000277541 CHMP4CQ96CF2 233 aa16.79■□□□□ 0.28
NOTCH1-201ENST00000277541 TPM1P09493 284 aa16.79■□□□□ 0.28
NOTCH1-201ENST00000277541 FOXD1Q16676 465 aa16.79■□□□□ 0.28
NOTCH1-201ENST00000277541 MAP7D2Q96T17 732 aa16.79■□□□□ 0.28
NOTCH1-201ENST00000277541 WIZO95785 1651 aa16.78■□□□□ 0.28
NOTCH1-201ENST00000277541 ANKRD30AQ9BXX3 1397 aa16.78■□□□□ 0.28
NOTCH1-201ENST00000277541 LMOD3Q0VAK6 560 aa16.78■□□□□ 0.28
NOTCH1-201ENST00000277541 H3BQV1 296 aa16.78■□□□□ 0.28
NOTCH1-201ENST00000277541 IFFO2Q5TF58 517 aa16.78■□□□□ 0.28
NOTCH1-201ENST00000277541 ISY1Q9ULR0 285 aaKnown RBP16.78■□□□□ 0.28
NOTCH1-201ENST00000277541 RASSF8Q8NHQ8 419 aa16.77■□□□□ 0.28
NOTCH1-201ENST00000277541 BECN2A8MW95 431 aa16.77■□□□□ 0.28
NOTCH1-201ENST00000277541 CGNL1Q0VF96 1302 aa16.77■□□□□ 0.28
NOTCH1-201ENST00000277541 CCAR2Q8N163 923 aaKnown RBP16.77■□□□□ 0.27
NOTCH1-201ENST00000277541 NUP155O75694 1391 aa16.76■□□□□ 0.27
NOTCH1-201ENST00000277541 FOXD4L5Q5VV16 416 aaPredicted RBP16.76■□□□□ 0.27
NOTCH1-201ENST00000277541 FOXD4L4Q8WXT5 416 aaPredicted RBP16.76■□□□□ 0.27
NOTCH1-201ENST00000277541 SF3A1Q15459 793 aaKnown RBP16.76■□□□□ 0.27
NOTCH1-201ENST00000277541 CCDC18Q5T9S5 1454 aa16.75■□□□□ 0.27
NOTCH1-201ENST00000277541 CALRP27797 417 aaKnown RBP16.75■□□□□ 0.27
NOTCH1-201ENST00000277541 CREBRFQ8IUR6 639 aa16.75■□□□□ 0.27
NOTCH1-201ENST00000277541 SMARCA2P51531 1590 aa16.75■□□□□ 0.27
NOTCH1-201ENST00000277541 CLUAP1Q96AJ1 413 aa16.74■□□□□ 0.27
NOTCH1-201ENST00000277541 CCDC88BA6NC98 1476 aa16.74■□□□□ 0.27
NOTCH1-201ENST00000277541 REC8O95072 547 aa16.74■□□□□ 0.27
NOTCH1-201ENST00000277541 CCDC146Q8IYE0 955 aa16.74■□□□□ 0.27
NOTCH1-201ENST00000277541 ZNF592Q92610 1267 aa16.74■□□□□ 0.27
NOTCH1-201ENST00000277541 GORABQ5T7V8 394 aa16.73■□□□□ 0.27
NOTCH1-201ENST00000277541 SLC4A3P48751 1232 aa16.73■□□□□ 0.27
NOTCH1-201ENST00000277541 KANK4Q5T7N3 995 aaPredicted RBP16.73■□□□□ 0.27
NOTCH1-201ENST00000277541 TPD52L1Q16890 204 aaPredicted RBP16.73■□□□□ 0.27
NOTCH1-201ENST00000277541 E9PSI1 815 aa16.73■□□□□ 0.27
NOTCH1-201ENST00000277541 SOX12O15370 315 aa16.72■□□□□ 0.27
NOTCH1-201ENST00000277541 SAFB2Q14151 953 aaKnown RBP eCLIP16.72■□□□□ 0.27
NOTCH1-201ENST00000277541 TPM2P07951 284 aa16.72■□□□□ 0.27
NOTCH1-201ENST00000277541 CEP89Q96ST8 783 aa16.72■□□□□ 0.27
NOTCH1-201ENST00000277541 ARGLU1Q9NWB6 273 aaPredicted RBP16.71■□□□□ 0.27
NOTCH1-201ENST00000277541 TERF2IPQ9NYB0 399 aa16.71■□□□□ 0.27
NOTCH1-201ENST00000277541 CARMIL2Q6F5E8 1435 aa16.71■□□□□ 0.27
NOTCH1-201ENST00000277541 CHMP5Q9NZZ3 219 aa16.71■□□□□ 0.26
NOTCH1-201ENST00000277541 TOP2AP11388 1531 aaKnown RBP16.7■□□□□ 0.26
NOTCH1-201ENST00000277541 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
NOTCH1-201ENST00000277541 DHX57Q6P158 1386 aaKnown RBP16.69■□□□□ 0.26
NOTCH1-201ENST00000277541 CWC15Q9P013 229 aaKnown RBP16.69■□□□□ 0.26
NOTCH1-201ENST00000277541 CCDC39Q9UFE4 941 aa16.69■□□□□ 0.26
NOTCH1-201ENST00000277541 PES1O00541 588 aaKnown RBP16.68■□□□□ 0.26
NOTCH1-201ENST00000277541 CRBNQ96SW2 442 aa16.68■□□□□ 0.26
NOTCH1-201ENST00000277541 FAM184AQ8NB25 1140 aa16.68■□□□□ 0.26
NOTCH1-201ENST00000277541 NASPP49321 788 aaPredicted RBP16.68■□□□□ 0.26
NOTCH1-201ENST00000277541 ANKRD45Q5TZF3 282 aa16.68■□□□□ 0.26
NOTCH1-201ENST00000277541 ZKSCAN2Q63HK3 967 aa16.68■□□□□ 0.26
NOTCH1-201ENST00000277541 SLC4A10Q6U841 1118 aa16.67■□□□□ 0.26
NOTCH1-201ENST00000277541 EXOC6Q8TAG9 804 aa16.67■□□□□ 0.26
NOTCH1-201ENST00000277541 L3MBTL2Q969R5 705 aa16.67■□□□□ 0.26
NOTCH1-201ENST00000277541 MRE11P49959 708 aa16.67■□□□□ 0.26
NOTCH1-201ENST00000277541 CHMP3Q9Y3E7 222 aa16.67■□□□□ 0.26
NOTCH1-201ENST00000277541 ROCK1Q13464 1354 aa16.67■□□□□ 0.26
NOTCH1-201ENST00000277541 ACBD3Q9H3P7 528 aa16.67■□□□□ 0.26
NOTCH1-201ENST00000277541 DIAPH3Q9NSV4 1193 aa16.67■□□□□ 0.26
NOTCH1-201ENST00000277541 HOMER1Q86YM7 354 aa16.66■□□□□ 0.26
NOTCH1-201ENST00000277541 IPO7O95373 1038 aaKnown RBP16.66■□□□□ 0.26
NOTCH1-201ENST00000277541 HOOK1Q9UJC3 728 aaKnown RBP16.66■□□□□ 0.26
NOTCH1-201ENST00000277541 NUCB2P80303 420 aa16.66■□□□□ 0.26
NOTCH1-201ENST00000277541 USP47Q96K76 1375 aa16.66■□□□□ 0.26
NOTCH1-201ENST00000277541 CCDC66A2RUB6 948 aa16.65■□□□□ 0.26
NOTCH1-201ENST00000277541 PKNOX2Q96KN3 472 aa16.65■□□□□ 0.26
NOTCH1-201ENST00000277541 AK7Q96M32 723 aa16.65■□□□□ 0.26
NOTCH1-201ENST00000277541 PRKRIP1Q9H875 184 aaPredicted RBP16.65■□□□□ 0.26
NOTCH1-201ENST00000277541 PRDM2Q13029 1718 aa16.65■□□□□ 0.26
NOTCH1-201ENST00000277541 NFKBIBQ15653 356 aa16.65■□□□□ 0.26
NOTCH1-201ENST00000277541 PLIN1O60240 522 aa16.65■□□□□ 0.26
NOTCH1-201ENST00000277541 STK26Q9P289 416 aa16.64■□□□□ 0.25
NOTCH1-201ENST00000277541 ANKRD20A12PQ8NF67 263 aa16.64■□□□□ 0.25
NOTCH1-201ENST00000277541 UACAQ9BZF9 1416 aa16.64■□□□□ 0.25
NOTCH1-201ENST00000277541 DDX19BQ9UMR2 479 aa16.64■□□□□ 0.25
NOTCH1-201ENST00000277541 RILPL2Q969X0 211 aa16.64■□□□□ 0.25
NOTCH1-201ENST00000277541 AAMPQ13685 434 aa16.63■□□□□ 0.25
NOTCH1-201ENST00000277541 CCDC144AA2RUR9 1427 aa16.63■□□□□ 0.25
NOTCH1-201ENST00000277541 IFT57Q9NWB7 429 aa16.63■□□□□ 0.25
NOTCH1-201ENST00000277541 TAF7LQ5H9L4 462 aa16.62■□□□□ 0.25
NOTCH1-201ENST00000277541 FOXD4L6Q3SYB3 417 aaPredicted RBP16.62■□□□□ 0.25
NOTCH1-201ENST00000277541 HSP90B2PQ58FF3 399 aa16.62■□□□□ 0.25
NOTCH1-201ENST00000277541 FOXD4L3Q6VB84 417 aaPredicted RBP16.62■□□□□ 0.25
NOTCH1-201ENST00000277541 RUFY1Q96T51 708 aa16.62■□□□□ 0.25
NOTCH1-201ENST00000277541 NGEFQ8N5V2 710 aa16.62■□□□□ 0.25
NOTCH1-201ENST00000277541 CUX1P39880 1505 aa16.61■□□□□ 0.25
NOTCH1-201ENST00000277541 RUFY2Q8WXA3 655 aa16.61■□□□□ 0.25
NOTCH1-201ENST00000277541 TMX4Q9H1E5 349 aaPredicted RBP16.61■□□□□ 0.25
NOTCH1-201ENST00000277541 MCTP1Q6DN14 999 aa16.61■□□□□ 0.25
NOTCH1-201ENST00000277541 PDE4CQ08493 712 aa16.6■□□□□ 0.25
NOTCH1-201ENST00000277541 CECR2Q9BXF3 1484 aa16.6■□□□□ 0.25
NOTCH1-201ENST00000277541 PAK3O75914 559 aaPredicted RBP16.6■□□□□ 0.25
NOTCH1-201ENST00000277541 ZKSCAN1P17029 563 aaPredicted RBP16.6■□□□□ 0.25
NOTCH1-201ENST00000277541 NAT10Q9H0A0 1025 aaKnown RBP16.6■□□□□ 0.25
NOTCH1-201ENST00000277541 LRRFIP1Q32MZ4 808 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms