RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 POGKQ9P215 609 aa12.03□□□□□ -0.48
SEC16A-201ENST00000277537 SYCP2Q9BX26 1530 aa12.02□□□□□ -0.49
SEC16A-201ENST00000277537 KDM6BO15054 1643 aa12.01□□□□□ -0.49
SEC16A-201ENST00000277537 CNTLNQ9NXG0 1405 aa12.01□□□□□ -0.49
SEC16A-201ENST00000277537 CFAP70Q5T0N1 1121 aa12.01□□□□□ -0.49
SEC16A-201ENST00000277537 KTN1Q86UP2 1357 aaKnown RBP12□□□□□ -0.49
SEC16A-201ENST00000277537 ITSN2Q9NZM3 1697 aa12□□□□□ -0.49
SEC16A-201ENST00000277537 NEUROD2Q15784 382 aa12□□□□□ -0.49
SEC16A-201ENST00000277537 TRAPPC8Q9Y2L5 1435 aa12□□□□□ -0.49
SEC16A-201ENST00000277537 DNMT1P26358 1616 aaKnown RBP11.99□□□□□ -0.49
SEC16A-201ENST00000277537 ERCC6L2Q5T890 1561 aa11.99□□□□□ -0.49
SEC16A-201ENST00000277537 PLCH2O75038 1416 aa11.99□□□□□ -0.49
SEC16A-201ENST00000277537 TMEM132EQ6IEE7 984 aa11.99□□□□□ -0.49
SEC16A-201ENST00000277537 LRRIQ1Q96JM4 1722 aa11.99□□□□□ -0.49
SEC16A-201ENST00000277537 SRPK2P78362 688 aaKnown RBP11.98□□□□□ -0.49
SEC16A-201ENST00000277537 CD109Q6YHK3 1445 aa11.98□□□□□ -0.49
SEC16A-201ENST00000277537 FANCAO15360 1455 aa11.98□□□□□ -0.49
SEC16A-201ENST00000277537 ADGRL1O94910 1474 aa11.98□□□□□ -0.49
SEC16A-201ENST00000277537 CCDC136Q96JN2 1154 aa11.98□□□□□ -0.49
SEC16A-201ENST00000277537 ABCA8O94911 1581 aa11.98□□□□□ -0.49
SEC16A-201ENST00000277537 ABCC2Q92887 1545 aa11.97□□□□□ -0.49
SEC16A-201ENST00000277537 CANXP27824 592 aaKnown RBP11.97□□□□□ -0.49
SEC16A-201ENST00000277537 RALBP1Q15311 655 aa11.97□□□□□ -0.49
SEC16A-201ENST00000277537 CHD1O14646 1710 aa11.97□□□□□ -0.49
SEC16A-201ENST00000277537 ASXL2Q76L83 1435 aa11.97□□□□□ -0.49
SEC16A-201ENST00000277537 PZPP20742 1482 aa11.97□□□□□ -0.49
SEC16A-201ENST00000277537 PPM1GO15355 546 aaPredicted RBP11.97□□□□□ -0.49
SEC16A-201ENST00000277537 B4GALNT3Q6L9W6 998 aa11.95□□□□□ -0.5
SEC16A-201ENST00000277537 ABCC10Q5T3U5 1492 aa11.95□□□□□ -0.5
SEC16A-201ENST00000277537 NLRP13Q86W25 1043 aa11.95□□□□□ -0.5
SEC16A-201ENST00000277537 PLEKHG5O94827 1062 aa11.93□□□□□ -0.5
SEC16A-201ENST00000277537 MYBBP1AQ9BQG0 1328 aaKnown RBP11.93□□□□□ -0.5
SEC16A-201ENST00000277537 MORC1Q86VD1 984 aa11.92□□□□□ -0.5
SEC16A-201ENST00000277537 NEFMP07197 916 aa11.92□□□□□ -0.5
SEC16A-201ENST00000277537 WDR7Q9Y4E6 1490 aa11.92□□□□□ -0.5
SEC16A-201ENST00000277537 EIF3AQ14152 1382 aaKnown RBP11.92□□□□□ -0.5
SEC16A-201ENST00000277537 VGFO15240 615 aaPredicted RBP11.91□□□□□ -0.5
SEC16A-201ENST00000277537 MBD5Q9P267 1494 aa11.91□□□□□ -0.5
SEC16A-201ENST00000277537 BCL11AQ9H165 835 aa11.91□□□□□ -0.5
SEC16A-201ENST00000277537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.9□□□□□ -0.5
SEC16A-201ENST00000277537 CCDC146Q8IYE0 955 aa11.9□□□□□ -0.51
SEC16A-201ENST00000277537 ADGRL2O95490 1459 aa11.89□□□□□ -0.51
SEC16A-201ENST00000277537 FAM135AQ9P2D6 1515 aa11.89□□□□□ -0.51
SEC16A-201ENST00000277537 U2SURPO15042 1029 aaKnown RBP11.88□□□□□ -0.51
SEC16A-201ENST00000277537 SHANK2Q9UPX8 1470 aa11.88□□□□□ -0.51
SEC16A-201ENST00000277537 GCC2Q8IWJ2 1684 aa11.88□□□□□ -0.51
SEC16A-201ENST00000277537 MINK1Q8N4C8 1332 aaPredicted RBP11.88□□□□□ -0.51
SEC16A-201ENST00000277537 CFAP53Q96M91 514 aa11.88□□□□□ -0.51
SEC16A-201ENST00000277537 NUTM2FA1L443 756 aa11.87□□□□□ -0.51
SEC16A-201ENST00000277537 ADGRF5Q8IZF2 1346 aa11.87□□□□□ -0.51
SEC16A-201ENST00000277537 DHX29Q7Z478 1369 aaKnown RBP11.87□□□□□ -0.51
SEC16A-201ENST00000277537 ERBINQ96RT1 1412 aa11.87□□□□□ -0.51
SEC16A-201ENST00000277537 PPP4R2Q9NY27 417 aa11.86□□□□□ -0.51
SEC16A-201ENST00000277537 CENPJQ9HC77 1338 aaPredicted RBP11.86□□□□□ -0.51
SEC16A-201ENST00000277537 SOX12O15370 315 aa11.86□□□□□ -0.51
SEC16A-201ENST00000277537 ZBED9Q6R2W3 1325 aa11.86□□□□□ -0.51
SEC16A-201ENST00000277537 TTC37Q6PGP7 1564 aa11.86□□□□□ -0.51
SEC16A-201ENST00000277537 TEX14Q8IWB6 1497 aa11.85□□□□□ -0.51
SEC16A-201ENST00000277537 NUDCQ9Y266 331 aa11.85□□□□□ -0.51
SEC16A-201ENST00000277537 NPM2Q86SE8 214 aaKnown RBP11.85□□□□□ -0.51
SEC16A-201ENST00000277537 DENND4BO75064 1496 aaPredicted RBP11.85□□□□□ -0.51
SEC16A-201ENST00000277537 SAMD9LQ8IVG5 1584 aa11.84□□□□□ -0.51
SEC16A-201ENST00000277537 DUOX2Q9NRD8 1548 aa11.84□□□□□ -0.51
SEC16A-201ENST00000277537 FBXO31Q5XUX0 539 aaPredicted RBP11.84□□□□□ -0.51
SEC16A-201ENST00000277537 STAC3Q96MF2 364 aa11.84□□□□□ -0.51
SEC16A-201ENST00000277537 ANP32EQ9BTT0 268 aa11.84□□□□□ -0.51
SEC16A-201ENST00000277537 C14orf37Q86TY3 774 aa11.83□□□□□ -0.52
SEC16A-201ENST00000277537 CABP2Q9NPB3 220 aa11.83□□□□□ -0.52
SEC16A-201ENST00000277537 TSHZ2Q9NRE2 1034 aa11.83□□□□□ -0.52
SEC16A-201ENST00000277537 SLC12A5Q9H2X9 1139 aa11.83□□□□□ -0.52
SEC16A-201ENST00000277537 PNISRQ8TF01 805 aaKnown RBP11.82□□□□□ -0.52
SEC16A-201ENST00000277537 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.82□□□□□ -0.52
SEC16A-201ENST00000277537 RCAN3Q9UKA8 241 aa11.82□□□□□ -0.52
SEC16A-201ENST00000277537 KDM5BQ9UGL1 1544 aa11.82□□□□□ -0.52
SEC16A-201ENST00000277537 IDI1Q13907 227 aa11.82□□□□□ -0.52
SEC16A-201ENST00000277537 CDC42BPAQ5VT25 1732 aa11.82□□□□□ -0.52
SEC16A-201ENST00000277537 U2AF1L5P0DN76 240 aaPredicted RBP11.81□□□□□ -0.52
SEC16A-201ENST00000277537 U2AF1Q01081 240 aaKnown RBP eCLIP11.81□□□□□ -0.52
SEC16A-201ENST00000277537 HDGFP51858 240 aaKnown RBP11.81□□□□□ -0.52
SEC16A-201ENST00000277537 ARHGEF12Q9NZN5 1544 aa11.81□□□□□ -0.52
SEC16A-201ENST00000277537 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.81□□□□□ -0.52
SEC16A-201ENST00000277537 RRP7AQ9Y3A4 280 aaKnown RBP11.8□□□□□ -0.52
SEC16A-201ENST00000277537 DISP3Q9P2K9 1392 aa11.8□□□□□ -0.52
SEC16A-201ENST00000277537 DAXXQ9UER7 740 aaPredicted RBP11.8□□□□□ -0.52
SEC16A-201ENST00000277537 EVC2Q86UK5 1308 aa11.8□□□□□ -0.52
SEC16A-201ENST00000277537 ZBTB7CA1YPR0 619 aa11.8□□□□□ -0.52
SEC16A-201ENST00000277537 ADAMTS8Q9UP79 889 aa11.8□□□□□ -0.52
SEC16A-201ENST00000277537 PRAG1Q86YV5 1406 aa11.8□□□□□ -0.52
SEC16A-201ENST00000277537 HDGFL2Q7Z4V5 671 aaPredicted RBP11.8□□□□□ -0.52
SEC16A-201ENST00000277537 FRAT1Q92837 279 aaPredicted RBP11.8□□□□□ -0.52
SEC16A-201ENST00000277537 LAS1LQ9Y4W2 734 aaKnown RBP11.79□□□□□ -0.52
SEC16A-201ENST00000277537 PLIN1O60240 522 aa11.79□□□□□ -0.52
SEC16A-201ENST00000277537 CDCA7LQ96GN5 454 aa11.79□□□□□ -0.52
SEC16A-201ENST00000277537 APAF1O14727 1248 aa11.78□□□□□ -0.52
SEC16A-201ENST00000277537 ADGBQ8N7X0 1667 aa11.78□□□□□ -0.52
SEC16A-201ENST00000277537 RALGAPBQ86X10 1494 aa11.78□□□□□ -0.52
SEC16A-201ENST00000277537 ZCCHC11Q5TAX3 1644 aaKnown RBP11.78□□□□□ -0.52
SEC16A-201ENST00000277537 A2MP01023 1474 aa11.78□□□□□ -0.52
SEC16A-201ENST00000277537 MAPK8IP3Q9UPT6 1336 aa11.78□□□□□ -0.52
SEC16A-201ENST00000277537 ZNF518AQ6AHZ1 1483 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms