RNA–Protein interactions for RNA: ENST00000269881.7

CALR3-201, Transcript of calreticulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR3, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3-201ENST00000269881 KIF15Q9NS87 1388 aa21.52■■□□□ 1.04
CALR3-201ENST00000269881 DUOX2Q9NRD8 1548 aa21.52■■□□□ 1.04
CALR3-201ENST00000269881 SETD1BQ9UPS6 1966 aaKnown RBP21.52■■□□□ 1.04
CALR3-201ENST00000269881 FAM135AQ9P2D6 1515 aa21.51■■□□□ 1.03
CALR3-201ENST00000269881 PPARGC1BQ86YN6 1023 aaKnown RBP21.51■■□□□ 1.03
CALR3-201ENST00000269881 RRP7BPQ9NSQ0 103 aa21.51■■□□□ 1.03
CALR3-201ENST00000269881 CHIC2Q9UKJ5 165 aa21.5■■□□□ 1.03
CALR3-201ENST00000269881 EIF2AK4Q9P2K8 1649 aaKnown RBP21.5■■□□□ 1.03
CALR3-201ENST00000269881 KDM5DQ9BY66 1539 aa21.5■■□□□ 1.03
CALR3-201ENST00000269881 NPATQ14207 1427 aa21.47■■□□□ 1.03
CALR3-201ENST00000269881 ERBINQ96RT1 1412 aa21.46■■□□□ 1.03
CALR3-201ENST00000269881 HSPA2P54652 639 aa21.46■■□□□ 1.03
CALR3-201ENST00000269881 KANK1Q14678 1352 aa21.43■■□□□ 1.02
CALR3-201ENST00000269881 RNF17Q9BXT8 1623 aaKnown RBP21.43■■□□□ 1.02
CALR3-201ENST00000269881 ZC3H13Q5T200 1668 aaKnown RBP21.42■■□□□ 1.02
CALR3-201ENST00000269881 ITGAEP38570 1179 aa21.39■■□□□ 1.01
CALR3-201ENST00000269881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.39■■□□□ 1.01
CALR3-201ENST00000269881 NCOA1Q15788 1441 aa21.38■■□□□ 1.01
CALR3-201ENST00000269881 ADGRL2O95490 1459 aa21.38■■□□□ 1.01
CALR3-201ENST00000269881 PTPRKQ15262 1439 aa21.38■■□□□ 1.01
CALR3-201ENST00000269881 DMRT2Q9Y5R5 561 aa21.37■■□□□ 1.01
CALR3-201ENST00000269881 PZPP20742 1482 aa21.37■■□□□ 1.01
CALR3-201ENST00000269881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.36■■□□□ 1.01
CALR3-201ENST00000269881 ABCC3O15438 1527 aa21.34■■□□□ 1.01
CALR3-201ENST00000269881 MYO3AQ8NEV4 1616 aa21.34■■□□□ 1.01
CALR3-201ENST00000269881 TNRQ92752 1358 aa21.34■■□□□ 1.01
CALR3-201ENST00000269881 PRDM15P57071 1507 aaPredicted RBP21.33■■□□□ 1
CALR3-201ENST00000269881 ANKRD50Q9ULJ7 1429 aa21.32■■□□□ 1
CALR3-201ENST00000269881 CEP152O94986 1710 aa21.31■■□□□ 1
CALR3-201ENST00000269881 ROCK1Q13464 1354 aa21.31■■□□□ 1
CALR3-201ENST00000269881 CEP170BQ9Y4F5 1589 aaPredicted RBP21.3■■□□□ 1
CALR3-201ENST00000269881 ZNF142P52746 1687 aaPredicted RBP21.3■■□□□ 1
CALR3-201ENST00000269881 CAMSAP1Q5T5Y3 1602 aa21.29■■□□□ 1
CALR3-201ENST00000269881 FBXO31Q5XUX0 539 aaPredicted RBP21.29■■□□□ 1
CALR3-201ENST00000269881 DEPDC5O75140 1603 aa21.29■■□□□ 1
CALR3-201ENST00000269881 MROH1Q8NDA8 1641 aa21.29■■□□□ 1
CALR3-201ENST00000269881 RRBP1Q9P2E9 1410 aaKnown RBP21.27■■□□□ 1
CALR3-201ENST00000269881 A2ML1A8K2U0 1454 aa21.26■□□□□ 0.99
CALR3-201ENST00000269881 NLRP1Q9C000 1473 aa21.26■□□□□ 0.99
CALR3-201ENST00000269881 ERVK-7P63135 1459 aa21.22■□□□□ 0.99
CALR3-201ENST00000269881 PKD2Q13563 968 aa21.22■□□□□ 0.99
CALR3-201ENST00000269881 THEMISQ8N1K5 641 aaPredicted RBP21.22■□□□□ 0.99
CALR3-201ENST00000269881 ARHGAP31Q2M1Z3 1444 aa21.21■□□□□ 0.99
CALR3-201ENST00000269881 PLA2R1Q13018 1463 aa21.21■□□□□ 0.99
CALR3-201ENST00000269881 SPATA31D1Q6ZQQ2 1576 aa21.21■□□□□ 0.99
CALR3-201ENST00000269881 CFAP65Q6ZU64 1925 aaKnown RBP21.21■□□□□ 0.99
CALR3-201ENST00000269881 STRCQ7RTU9 1775 aa21.2■□□□□ 0.98
CALR3-201ENST00000269881 UGGT1Q9NYU2 1555 aa21.19■□□□□ 0.98
CALR3-201ENST00000269881 STAG3Q9UJ98 1225 aa21.19■□□□□ 0.98
CALR3-201ENST00000269881 LMTK2Q8IWU2 1503 aa21.19■□□□□ 0.98
CALR3-201ENST00000269881 PTPRTO14522 1441 aa21.18■□□□□ 0.98
CALR3-201ENST00000269881 VWDEQ8N2E2 1590 aa21.15■□□□□ 0.98
CALR3-201ENST00000269881 EFCAB6Q5THR3 1501 aa21.15■□□□□ 0.98
CALR3-201ENST00000269881 NCKAP5LQ9HCH0 1330 aa21.15■□□□□ 0.98
CALR3-201ENST00000269881 ANKLE2Q86XL3 938 aa21.15■□□□□ 0.98
CALR3-201ENST00000269881 UNC13BO14795 1591 aa21.14■□□□□ 0.98
CALR3-201ENST00000269881 RPRD2Q5VT52 1461 aaKnown RBP21.13■□□□□ 0.97
CALR3-201ENST00000269881 NUP155O75694 1391 aa21.12■□□□□ 0.97
CALR3-201ENST00000269881 TET3O43151 1660 aa21.12■□□□□ 0.97
CALR3-201ENST00000269881 POLR1AO95602 1720 aaPredicted RBP21.11■□□□□ 0.97
CALR3-201ENST00000269881 GCC2Q8IWJ2 1684 aa21.1■□□□□ 0.97
CALR3-201ENST00000269881 EID1Q9Y6B2 187 aa21.08■□□□□ 0.97
CALR3-201ENST00000269881 IQGAP3Q86VI3 1631 aa21.07■□□□□ 0.96
CALR3-201ENST00000269881 SLC52A1Q9NWF4 448 aa21.07■□□□□ 0.96
CALR3-201ENST00000269881 UBR1Q8IWV7 1749 aa21.05■□□□□ 0.96
CALR3-201ENST00000269881 CERKQ8TCT0 537 aa21.05■□□□□ 0.96
CALR3-201ENST00000269881 HFM1A2PYH4 1435 aa21.04■□□□□ 0.96
CALR3-201ENST00000269881 TRIM52Q96A61 297 aa21.04■□□□□ 0.96
CALR3-201ENST00000269881 NAIPQ13075 1403 aa21.04■□□□□ 0.96
CALR3-201ENST00000269881 PIK3C2BO00750 1634 aa21.03■□□□□ 0.96
CALR3-201ENST00000269881 NOS1P29475 1434 aa21.03■□□□□ 0.96
CALR3-201ENST00000269881 FBXO41Q8TF61 875 aa21.02■□□□□ 0.96
CALR3-201ENST00000269881 IDI1Q13907 227 aa21.01■□□□□ 0.95
CALR3-201ENST00000269881 NPHP4O75161 1426 aaPredicted RBP21.01■□□□□ 0.95
CALR3-201ENST00000269881 KDM5AP29375 1690 aaKnown RBP21■□□□□ 0.95
CALR3-201ENST00000269881 CHGAP10645 457 aaKnown RBP21■□□□□ 0.95
CALR3-201ENST00000269881 HDGFP51858 240 aaKnown RBP21■□□□□ 0.95
CALR3-201ENST00000269881 ILDR1Q86SU0 546 aaPredicted RBP21■□□□□ 0.95
CALR3-201ENST00000269881 TXNDC2Q86VQ3 553 aa21■□□□□ 0.95
CALR3-201ENST00000269881 SYNMO15061 1565 aa21■□□□□ 0.95
CALR3-201ENST00000269881 E9PCH4 1651 aa20.99■□□□□ 0.95
CALR3-201ENST00000269881 SCAF11Q99590 1463 aaKnown RBP20.99■□□□□ 0.95
CALR3-201ENST00000269881 IQGAP1P46940 1657 aa20.98■□□□□ 0.95
CALR3-201ENST00000269881 ACIN1Q9UKV3 1341 aaKnown RBP20.98■□□□□ 0.95
CALR3-201ENST00000269881 ADGRB3O60242 1522 aa20.98■□□□□ 0.95
CALR3-201ENST00000269881 NEURL4Q96JN8 1562 aa20.97■□□□□ 0.95
CALR3-201ENST00000269881 MED14O60244 1454 aa20.96■□□□□ 0.95
CALR3-201ENST00000269881 SLIT1O75093 1534 aa20.96■□□□□ 0.95
CALR3-201ENST00000269881 BCANQ96GW7 911 aa20.96■□□□□ 0.95
CALR3-201ENST00000269881 ZNF335Q9H4Z2 1342 aaPredicted RBP20.96■□□□□ 0.95
CALR3-201ENST00000269881 TMEM2Q9UHN6 1383 aa20.96■□□□□ 0.95
CALR3-201ENST00000269881 PPP1R15AO75807 674 aaPredicted RBP20.95■□□□□ 0.94
CALR3-201ENST00000269881 SLC4A1APQ9BWU0 796 aaKnown RBP20.93■□□□□ 0.94
CALR3-201ENST00000269881 ARHGAP23Q9P227 1491 aa20.93■□□□□ 0.94
CALR3-201ENST00000269881 FOXD1Q16676 465 aa20.92■□□□□ 0.94
CALR3-201ENST00000269881 SPHKAPQ2M3C7 1700 aa20.9■□□□□ 0.94
CALR3-201ENST00000269881 IQSEC2Q5JU85 1478 aa20.9■□□□□ 0.94
CALR3-201ENST00000269881 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.9■□□□□ 0.94
CALR3-201ENST00000269881 LTBP4Q8N2S1 1624 aa20.89■□□□□ 0.94
CALR3-201ENST00000269881 LTKP29376 864 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms